RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 ILDR2Q71H61 639 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 IGSF1Q8N6C5 1336 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 IFNL2Q8IZJ0 200 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
CDC7-203ENST00000428239 TEFQ10587 303 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 FCHSD2O94868 740 aa9.24□□□□□ -0.93
CDC7-203ENST00000428239 YTHDC1Q96MU7 727 aaKnown RBP9.24□□□□□ -0.93
CDC7-203ENST00000428239 HSP90AB1P08238 724 aaKnown RBP9.23□□□□□ -0.93
CDC7-203ENST00000428239 CABP4P57796 275 aa9.23□□□□□ -0.93
CDC7-203ENST00000428239 RGS12O14924 1447 aa9.23□□□□□ -0.93
CDC7-203ENST00000428239 APBA3O96018 575 aa9.23□□□□□ -0.93
CDC7-203ENST00000428239 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
CDC7-203ENST00000428239 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
CDC7-203ENST00000428239 ANKRD26Q9UPS8 1709 aa9.23□□□□□ -0.93
CDC7-203ENST00000428239 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
CDC7-203ENST00000428239 MTHFSDQ2M296 383 aaKnown RBP9.22□□□□□ -0.93
CDC7-203ENST00000428239 TMOD3Q9NYL9 352 aa9.22□□□□□ -0.93
CDC7-203ENST00000428239 RGPD5Q99666 1765 aa9.22□□□□□ -0.93
CDC7-203ENST00000428239 RIPK4P57078 832 aa9.22□□□□□ -0.93
CDC7-203ENST00000428239 PHACTR3Q96KR7 559 aa9.22□□□□□ -0.93
CDC7-203ENST00000428239 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
CDC7-203ENST00000428239 APAF1O14727 1248 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 RUNDC1Q96C34 613 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 MEGF6O75095 1541 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 PEAK1Q9H792 1746 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.93
CDC7-203ENST00000428239 CRYBG1Q9Y4K1 1723 aa9.21□□□□□ -0.94
CDC7-203ENST00000428239 BAG6P46379 1132 aa9.21□□□□□ -0.94
CDC7-203ENST00000428239 DCTN1Q14203 1278 aa9.21□□□□□ -0.94
CDC7-203ENST00000428239 LMO7Q8WWI1 1683 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 CYP27B1O15528 508 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 PHKG2P15735 406 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 MCM10Q7L590 875 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
CDC7-203ENST00000428239 OVOS2A0A0G2JMS6 1433 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 TTC5Q8N0Z6 440 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 ARXQ96QS3 562 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 KCNQ2O43526 872 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 LMOD3Q0VAK6 560 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
CDC7-203ENST00000428239 ABCC6O95255 1503 aa9.19□□□□□ -0.94
CDC7-203ENST00000428239 GLI3P10071 1580 aa9.19□□□□□ -0.94
CDC7-203ENST00000428239 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
CDC7-203ENST00000428239 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
CDC7-203ENST00000428239 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
CDC7-203ENST00000428239 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
CDC7-203ENST00000428239 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
CDC7-203ENST00000428239 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDC7-203ENST00000428239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDC7-203ENST00000428239 TNS2Q63HR2 1409 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 NFE2L2Q16236 605 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 PNISRQ8TF01 805 aaKnown RBP9.18□□□□□ -0.94
CDC7-203ENST00000428239 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
CDC7-203ENST00000428239 DEFB132Q7Z7B7 95 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 NFATC2IPQ8NCF5 419 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CDC7-203ENST00000428239 COL18A1P39060 1754 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 USP54Q70EL1 1684 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 MSH5O43196 834 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 LGR6Q9HBX8 967 aa9.18□□□□□ -0.94
CDC7-203ENST00000428239 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
CDC7-203ENST00000428239 NRAPQ86VF7 1730 aa9.17□□□□□ -0.94
CDC7-203ENST00000428239 MAP3K5Q99683 1374 aa9.17□□□□□ -0.94
CDC7-203ENST00000428239 TMPOP42166 694 aaKnown RBP9.17□□□□□ -0.94
CDC7-203ENST00000428239 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
CDC7-203ENST00000428239 KDRP35968 1356 aa9.16□□□□□ -0.94
CDC7-203ENST00000428239 BTBD11A6QL63 1104 aa9.16□□□□□ -0.94
CDC7-203ENST00000428239 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
CDC7-203ENST00000428239 SLC39A6Q13433 755 aa9.16□□□□□ -0.94
CDC7-203ENST00000428239 KCNQ4P56696 695 aa9.15□□□□□ -0.94
CDC7-203ENST00000428239 TSPYL4Q9UJ04 414 aa9.15□□□□□ -0.94
CDC7-203ENST00000428239 RGPD2P0DJD1 1756 aa9.15□□□□□ -0.94
CDC7-203ENST00000428239 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.15□□□□□ -0.94
CDC7-203ENST00000428239 PTF1AQ7RTS3 328 aa9.15□□□□□ -0.94
CDC7-203ENST00000428239 COL3A1P02461 1466 aaPredicted RBP9.15□□□□□ -0.94
CDC7-203ENST00000428239 DISP2A7MBM2 1401 aa9.15□□□□□ -0.95
CDC7-203ENST00000428239 CALD1Q05682 793 aaKnown RBP9.15□□□□□ -0.95
CDC7-203ENST00000428239 PIGBQ92521 554 aa9.14□□□□□ -0.95
CDC7-203ENST00000428239 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC7-203ENST00000428239 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
CDC7-203ENST00000428239 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
CDC7-203ENST00000428239 PELP1Q8IZL8 1130 aaKnown RBP9.14□□□□□ -0.95
CDC7-203ENST00000428239 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
CDC7-203ENST00000428239 FAM208AQ9UK61 1670 aaKnown RBP9.14□□□□□ -0.95
CDC7-203ENST00000428239 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 SLC52A2Q9HAB3 445 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 EZH2Q15910 746 aaKnown RBP9.13□□□□□ -0.95
CDC7-203ENST00000428239 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 IL17REQ8NFR9 667 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
CDC7-203ENST00000428239 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms