RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 MIER1Q8N108 512 aa17.14■□□□□ 0.33
CCHCR1-205ENST00000428174 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
CCHCR1-205ENST00000428174 FCHSD2O94868 740 aa17.13■□□□□ 0.33
CCHCR1-205ENST00000428174 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
CCHCR1-205ENST00000428174 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 WNK3Q9BYP7 1800 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
CCHCR1-205ENST00000428174 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-205ENST00000428174 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
CCHCR1-205ENST00000428174 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-205ENST00000428174 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
CCHCR1-205ENST00000428174 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-205ENST00000428174 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-205ENST00000428174 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
CCHCR1-205ENST00000428174 NEFMP07197 916 aa17.09■□□□□ 0.33
CCHCR1-205ENST00000428174 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
CCHCR1-205ENST00000428174 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
CCHCR1-205ENST00000428174 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
CCHCR1-205ENST00000428174 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-205ENST00000428174 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-205ENST00000428174 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
CCHCR1-205ENST00000428174 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 CYP27B1O15528 508 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 PHACTR3Q96KR7 559 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
CCHCR1-205ENST00000428174 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
CCHCR1-205ENST00000428174 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
CCHCR1-205ENST00000428174 PHKG2P15735 406 aa17.04■□□□□ 0.32
CCHCR1-205ENST00000428174 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
CCHCR1-205ENST00000428174 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
CCHCR1-205ENST00000428174 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
CCHCR1-205ENST00000428174 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
CCHCR1-205ENST00000428174 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
CCHCR1-205ENST00000428174 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
CCHCR1-205ENST00000428174 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-205ENST00000428174 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
CCHCR1-205ENST00000428174 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-205ENST00000428174 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
CCHCR1-205ENST00000428174 NFE2L2Q16236 605 aa17■□□□□ 0.31
CCHCR1-205ENST00000428174 BCL9O00512 1426 aa16.99■□□□□ 0.31
CCHCR1-205ENST00000428174 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
CCHCR1-205ENST00000428174 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
CCHCR1-205ENST00000428174 ACSBG1Q96GR2 724 aa16.98■□□□□ 0.31
CCHCR1-205ENST00000428174 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
CCHCR1-205ENST00000428174 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
CCHCR1-205ENST00000428174 APAF1O14727 1248 aa16.97■□□□□ 0.31
CCHCR1-205ENST00000428174 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-205ENST00000428174 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-205ENST00000428174 TRIM37O94972 964 aa16.96■□□□□ 0.31
CCHCR1-205ENST00000428174 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-205ENST00000428174 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-205ENST00000428174 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-205ENST00000428174 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 KCNQ2O43526 872 aa16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 RIPK4P57078 832 aa16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-205ENST00000428174 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
CCHCR1-205ENST00000428174 BCL11BQ9C0K0 894 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-205ENST00000428174 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
CCHCR1-205ENST00000428174 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-205ENST00000428174 CABP4P57796 275 aa16.93■□□□□ 0.3
CCHCR1-205ENST00000428174 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
CCHCR1-205ENST00000428174 IL17REQ8NFR9 667 aa16.93■□□□□ 0.3
CCHCR1-205ENST00000428174 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
CCHCR1-205ENST00000428174 TMOD3Q9NYL9 352 aa16.92■□□□□ 0.3
CCHCR1-205ENST00000428174 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-205ENST00000428174 MCM10Q7L590 875 aa16.91■□□□□ 0.3
CCHCR1-205ENST00000428174 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
CCHCR1-205ENST00000428174 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
CCHCR1-205ENST00000428174 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
CCHCR1-205ENST00000428174 TEFQ10587 303 aa16.9■□□□□ 0.3
CCHCR1-205ENST00000428174 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCHCR1-205ENST00000428174 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
CCHCR1-205ENST00000428174 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
CCHCR1-205ENST00000428174 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 APBA3O96018 575 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 PIGBQ92521 554 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.29
CCHCR1-205ENST00000428174 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
CCHCR1-205ENST00000428174 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
CCHCR1-205ENST00000428174 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-205ENST00000428174 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
CCHCR1-205ENST00000428174 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-205ENST00000428174 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-205ENST00000428174 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
CCHCR1-205ENST00000428174 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
CCHCR1-205ENST00000428174 BAG6P46379 1132 aa16.86■□□□□ 0.29
CCHCR1-205ENST00000428174 MRC1P22897 1456 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms