RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■□□□□ 8.9
SNX13-203ENST00000428135 EXOC5O00471 708 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 FIBPO43427 364 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 STARD3NLO95772 234 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
SNX13-203ENST00000428135 NAIPQ13075 1403 aa11.64□□□□□ -0.55
SNX13-203ENST00000428135 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 ERC1Q8IUD2 1116 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 KDM5BQ9UGL1 1544 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 GPATCH8Q9UKJ3 1502 aaKnown RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 TMPOP42166 694 aaKnown RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
SNX13-203ENST00000428135 ANKIB1Q9P2G1 1089 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 ADAMTS12P58397 1594 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 USP5P45974 858 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 GSE1Q14687 1217 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
SNX13-203ENST00000428135 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 MPNDQ8N594 471 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 WDR62O43379 1518 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
SNX13-203ENST00000428135 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
SNX13-203ENST00000428135 ACEP12821 1306 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 CCDC69A6NI79 296 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
SNX13-203ENST00000428135 KCNA6P17658 529 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 A2MP01023 1474 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 TSPOAP1O95153 1857 aa11.62□□□□□ -0.55
SNX13-203ENST00000428135 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
SNX13-203ENST00000428135 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNX13-203ENST00000428135 ODF2Q5BJF6 829 aa11.61□□□□□ -0.55
SNX13-203ENST00000428135 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
SNX13-203ENST00000428135 ATAD2Q6PL18 1390 aa11.61□□□□□ -0.55
SNX13-203ENST00000428135 OFD1O75665 1012 aa11.61□□□□□ -0.55
SNX13-203ENST00000428135 NUCB2P80303 420 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 NCOA1Q15788 1441 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 NACAP1Q9BZK3 213 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 PRPF40AO75400 957 aaKnown RBP11.6□□□□□ -0.55
SNX13-203ENST00000428135 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 CAVIN1Q6NZI2 390 aaKnown RBP11.6□□□□□ -0.55
SNX13-203ENST00000428135 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 SKIDA1Q1XH10 827 aa11.6□□□□□ -0.55
SNX13-203ENST00000428135 ANXA1P04083 346 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 SSBP05455 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNX13-203ENST00000428135 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 ATP5J2-PTCD1G3V325 749 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 FCHSD2O94868 740 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 MVPQ14764 893 aaKnown RBP11.59□□□□□ -0.55
SNX13-203ENST00000428135 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
SNX13-203ENST00000428135 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
SNX13-203ENST00000428135 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.55
SNX13-203ENST00000428135 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 STK38Q15208 465 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 SMC2O95347 1197 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 PAF1Q8N7H5 531 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 GCC1Q96CN9 775 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 DDX11Q96FC9 970 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 CCDC8Q9H0W5 538 aaPredicted RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 ABCC2Q92887 1545 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 HIP1O00291 1037 aa11.58□□□□□ -0.56
SNX13-203ENST00000428135 JAKMIP1Q96N16 626 aaKnown RBP11.58□□□□□ -0.56
SNX13-203ENST00000428135 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 TRMT1LQ7Z2T5 733 aaKnown RBP11.57□□□□□ -0.56
SNX13-203ENST00000428135 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
SNX13-203ENST00000428135 ECM2O94769 699 aaPredicted RBP11.57□□□□□ -0.56
SNX13-203ENST00000428135 WDR78Q5VTH9 848 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 ANKRD24Q8TF21 1146 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 CCDC70Q6NSX1 233 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
SNX13-203ENST00000428135 RIMS2Q9UQ26 1411 aa11.57□□□□□ -0.56
SNX13-203ENST00000428135 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
SNX13-203ENST00000428135 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
SNX13-203ENST00000428135 GRM1Q13255 1194 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
SNX13-203ENST00000428135 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms