RNA–Protein interactions for RNA: ENST00000427688.5

CHL1-204, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-204ENST00000427688 CNGB1Q14028 1251 aaPredicted RBP28.65■■■□□ 2.18
CHL1-204ENST00000427688 NBPF14Q5TI25 921 aa28.65■■■□□ 2.18
CHL1-204ENST00000427688 NHSQ6T4R5 1651 aa28.64■■■□□ 2.18
CHL1-204ENST00000427688 PLSCR1O15162 318 aa28.64■■■□□ 2.18
CHL1-204ENST00000427688 CC2D1BQ5T0F9 858 aaKnown RBP28.64■■■□□ 2.18
CHL1-204ENST00000427688 EIF4A2Q14240 407 aaKnown RBP28.63■■■□□ 2.17
CHL1-204ENST00000427688 R3HDM1Q15032 1099 aaKnown RBP28.63■■■□□ 2.17
CHL1-204ENST00000427688 SYTL4Q96C24 671 aaPredicted RBP28.63■■■□□ 2.17
CHL1-204ENST00000427688 RREB1Q92766 1687 aa28.63■■■□□ 2.17
CHL1-204ENST00000427688 EYA1Q99502 592 aa28.62■■■□□ 2.17
CHL1-204ENST00000427688 RGPD3A6NKT7 1758 aaPredicted RBP28.61■■■□□ 2.17
CHL1-204ENST00000427688 RGPD4Q7Z3J3 1758 aa28.61■■■□□ 2.17
CHL1-204ENST00000427688 PCDH11XQ9BZA7 1347 aa28.61■■■□□ 2.17
CHL1-204ENST00000427688 PCDH11YQ9BZA8 1340 aa28.61■■■□□ 2.17
CHL1-204ENST00000427688 NUP188Q5SRE5 1749 aa28.6■■■□□ 2.17
CHL1-204ENST00000427688 PER1O15534 1290 aaPredicted RBP28.59■■■□□ 2.17
CHL1-204ENST00000427688 SHANK3Q9BYB0 1731 aa28.57■■■□□ 2.16
CHL1-204ENST00000427688 SPG7Q9UQ90 795 aa28.57■■■□□ 2.16
CHL1-204ENST00000427688 BTAF1O14981 1849 aa28.55■■■□□ 2.16
CHL1-204ENST00000427688 DOT1LQ8TEK3 1739 aa28.55■■■□□ 2.16
CHL1-204ENST00000427688 NCAPD2Q15021 1401 aa28.54■■■□□ 2.16
CHL1-204ENST00000427688 SRCAPQ6ZRS2 3230 aa28.54■■■□□ 2.16
CHL1-204ENST00000427688 PRIM1P49642 420 aaKnown RBP28.54■■■□□ 2.16
CHL1-204ENST00000427688 TXNRD1Q16881 649 aa28.54■■■□□ 2.16
CHL1-204ENST00000427688 MTHFSP49914 203 aa28.51■■■□□ 2.15
CHL1-204ENST00000427688 NPC1L1Q9UHC9 1359 aa28.5■■■□□ 2.15
CHL1-204ENST00000427688 IGSF1Q8N6C5 1336 aa28.5■■■□□ 2.15
CHL1-204ENST00000427688 PKD1L3Q7Z443 1732 aa28.49■■■□□ 2.15
CHL1-204ENST00000427688 CYP27B1O15528 508 aa28.48■■■□□ 2.15
CHL1-204ENST00000427688 PROM2Q8N271 834 aa28.48■■■□□ 2.15
CHL1-204ENST00000427688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.47■■■□□ 2.15
CHL1-204ENST00000427688 STK32BQ9NY57 414 aa28.46■■■□□ 2.15
CHL1-204ENST00000427688 SULT6B1Q6IMI4 303 aa28.44■■■□□ 2.14
CHL1-204ENST00000427688 IL13P35225 146 aa28.43■■■□□ 2.14
CHL1-204ENST00000427688 PLEKHO1Q53GL0 409 aaPredicted RBP28.43■■■□□ 2.14
CHL1-204ENST00000427688 MPRIPQ6WCQ1 1025 aa28.43■■■□□ 2.14
CHL1-204ENST00000427688 IFNL2Q8IZJ0 200 aa28.43■■■□□ 2.14
CHL1-204ENST00000427688 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
CHL1-204ENST00000427688 DIAPH1O60610 1272 aaKnown RBP28.41■■■□□ 2.14
CHL1-204ENST00000427688 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
CHL1-204ENST00000427688 PLEKHG2Q9H7P9 1386 aa28.4■■■□□ 2.14
CHL1-204ENST00000427688 SLC27A3Q5K4L6 730 aa28.4■■■□□ 2.14
CHL1-204ENST00000427688 PHKG2P15735 406 aa28.39■■■□□ 2.14
CHL1-204ENST00000427688 AMOTQ4VCS5 1084 aa28.39■■■□□ 2.14
CHL1-204ENST00000427688 SLC15A2Q16348 729 aa28.38■■■□□ 2.13
CHL1-204ENST00000427688 LRP5O75197 1615 aa28.38■■■□□ 2.13
CHL1-204ENST00000427688 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
CHL1-204ENST00000427688 ZNF530Q6P9A1 599 aaPredicted RBP28.37■■■□□ 2.13
CHL1-204ENST00000427688 C1orf141Q5JVX7 400 aa28.36■■■□□ 2.13
CHL1-204ENST00000427688 CFAP53Q96M91 514 aa28.36■■■□□ 2.13
CHL1-204ENST00000427688 HSP90AB1P08238 724 aaKnown RBP28.35■■■□□ 2.13
CHL1-204ENST00000427688 LRRC4BQ9NT99 713 aa28.35■■■□□ 2.13
CHL1-204ENST00000427688 TMOD3Q9NYL9 352 aa28.35■■■□□ 2.13
CHL1-204ENST00000427688 CCNL1Q9UK58 526 aaPredicted RBP28.35■■■□□ 2.13
CHL1-204ENST00000427688 TOGARAM1Q9Y4F4 1720 aa28.35■■■□□ 2.13
CHL1-204ENST00000427688 HMOX1P09601 288 aa28.34■■■□□ 2.13
CHL1-204ENST00000427688 U2SURPO15042 1029 aaKnown RBP28.33■■■□□ 2.13
CHL1-204ENST00000427688 KCNQ4P56696 695 aa28.33■■■□□ 2.13
CHL1-204ENST00000427688 ITGB4P16144 1822 aa28.33■■■□□ 2.13
CHL1-204ENST00000427688 KDRP35968 1356 aa28.33■■■□□ 2.13
CHL1-204ENST00000427688 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
CHL1-204ENST00000427688 SMARCC1Q92922 1105 aaPredicted RBP28.32■■■□□ 2.12
CHL1-204ENST00000427688 SPON1Q9HCB6 807 aa28.31■■■□□ 2.12
CHL1-204ENST00000427688 PALLDQ8WX93 1383 aa28.31■■■□□ 2.12
CHL1-204ENST00000427688 LY75O60449 1722 aa28.31■■■□□ 2.12
CHL1-204ENST00000427688 PIGBQ92521 554 aa28.3■■■□□ 2.12
CHL1-204ENST00000427688 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
CHL1-204ENST00000427688 DCAF5Q96JK2 942 aa28.29■■■□□ 2.12
CHL1-204ENST00000427688 HMGB2P26583 209 aaKnown RBP28.27■■■□□ 2.12
CHL1-204ENST00000427688 PPP2R1AP30153 589 aa28.27■■■□□ 2.12
CHL1-204ENST00000427688 ZNF827Q17R98 1081 aa28.27■■■□□ 2.12
CHL1-204ENST00000427688 PPP1R1BQ9UD71 204 aaPredicted RBP28.27■■■□□ 2.12
CHL1-204ENST00000427688 ZBTB7AO95365 584 aa28.26■■■□□ 2.11
CHL1-204ENST00000427688 TFCP2L1Q9NZI6 479 aa28.26■■■□□ 2.11
CHL1-204ENST00000427688 ERVV-2B6SEH9 535 aa28.25■■■□□ 2.11
CHL1-204ENST00000427688 PDGFDQ9GZP0 370 aaPredicted RBP28.25■■■□□ 2.11
CHL1-204ENST00000427688 NUDCQ9Y266 331 aa28.25■■■□□ 2.11
CHL1-204ENST00000427688 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
CHL1-204ENST00000427688 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
CHL1-204ENST00000427688 CABP4P57796 275 aa28.24■■■□□ 2.11
CHL1-204ENST00000427688 DDX10Q13206 875 aaKnown RBP28.23■■■□□ 2.11
CHL1-204ENST00000427688 AKT1S1Q96B36 256 aa28.23■■■□□ 2.11
CHL1-204ENST00000427688 AKAP4Q5JQC9 854 aa28.21■■■□□ 2.11
CHL1-204ENST00000427688 ASAP1Q9ULH1 1129 aa28.21■■■□□ 2.11
CHL1-204ENST00000427688 KDM6AO15550 1401 aaPredicted RBP28.2■■■□□ 2.11
CHL1-204ENST00000427688 ATF5Q9Y2D1 282 aaPredicted RBP28.2■■■□□ 2.1
CHL1-204ENST00000427688 MSH5O43196 834 aa28.19■■■□□ 2.1
CHL1-204ENST00000427688 C5P01031 1676 aa28.19■■■□□ 2.1
CHL1-204ENST00000427688 LOC102724428A0A0B4J2F2 783 aa28.18■■■□□ 2.1
CHL1-204ENST00000427688 SIK1P57059 783 aa28.18■■■□□ 2.1
CHL1-204ENST00000427688 MTFR1LQ9H019 292 aa28.18■■■□□ 2.1
CHL1-204ENST00000427688 ATG3Q9NT62 314 aa28.17■■■□□ 2.1
CHL1-204ENST00000427688 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
CHL1-204ENST00000427688 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
CHL1-204ENST00000427688 MTHFSDQ2M296 383 aaKnown RBP28.16■■■□□ 2.1
CHL1-204ENST00000427688 AK7Q96M32 723 aa28.16■■■□□ 2.1
CHL1-204ENST00000427688 ATP6V1AP38606 617 aa28.15■■■□□ 2.1
CHL1-204ENST00000427688 RBM42Q9BTD8 480 aaKnown RBP28.15■■■□□ 2.1
CHL1-204ENST00000427688 PNPLA7Q6ZV29 1317 aa28.15■■■□□ 2.1
CHL1-204ENST00000427688 NFATC2IPQ8NCF5 419 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms