RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 TNNT2P45379 298 aaPredicted RBP26.39■■□□□ 1.82
COL9A2-204ENST00000427563 WASHC2AQ641Q2 1341 aa26.39■■□□□ 1.81
COL9A2-204ENST00000427563 PPM1GO15355 546 aaPredicted RBP26.38■■□□□ 1.81
COL9A2-204ENST00000427563 DOT1LQ8TEK3 1739 aa26.38■■□□□ 1.81
COL9A2-204ENST00000427563 KAT6BQ8WYB5 2073 aa26.38■■□□□ 1.81
COL9A2-204ENST00000427563 NSD2O96028 1365 aa26.37■■□□□ 1.81
COL9A2-204ENST00000427563 LRP5O75197 1615 aa26.37■■□□□ 1.81
COL9A2-204ENST00000427563 DDX54Q8TDD1 881 aaKnown RBP26.37■■□□□ 1.81
COL9A2-204ENST00000427563 ZCRB1Q8TBF4 217 aaKnown RBP26.35■■□□□ 1.81
COL9A2-204ENST00000427563 PKD1L3Q7Z443 1732 aa26.34■■□□□ 1.81
COL9A2-204ENST00000427563 AMER1Q5JTC6 1135 aaPredicted RBP26.34■■□□□ 1.81
COL9A2-204ENST00000427563 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
COL9A2-204ENST00000427563 EYA1Q99502 592 aa26.32■■□□□ 1.8
COL9A2-204ENST00000427563 PER1O15534 1290 aaPredicted RBP26.31■■□□□ 1.8
COL9A2-204ENST00000427563 EIF4A2Q14240 407 aaKnown RBP26.3■■□□□ 1.8
COL9A2-204ENST00000427563 RAPGEF4Q8WZA2 1011 aa26.3■■□□□ 1.8
COL9A2-204ENST00000427563 TATP17735 454 aaPredicted RBP26.29■■□□□ 1.8
COL9A2-204ENST00000427563 TXNRD1Q16881 649 aa26.29■■□□□ 1.8
COL9A2-204ENST00000427563 KNSTRNQ9Y448 316 aa26.29■■□□□ 1.8
COL9A2-204ENST00000427563 PAPPAQ13219 1627 aa26.28■■□□□ 1.8
COL9A2-204ENST00000427563 TOGARAM1Q9Y4F4 1720 aa26.28■■□□□ 1.8
COL9A2-204ENST00000427563 MORC1Q86VD1 984 aa26.27■■□□□ 1.8
COL9A2-204ENST00000427563 NBPF14Q5TI25 921 aa26.26■■□□□ 1.79
COL9A2-204ENST00000427563 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
COL9A2-204ENST00000427563 CYP27B1O15528 508 aa26.24■■□□□ 1.79
COL9A2-204ENST00000427563 PRIM1P49642 420 aaKnown RBP26.24■■□□□ 1.79
COL9A2-204ENST00000427563 LY75O60449 1722 aa26.23■■□□□ 1.79
COL9A2-204ENST00000427563 ITGB4P16144 1822 aa26.21■■□□□ 1.79
COL9A2-204ENST00000427563 IGSF1Q8N6C5 1336 aa26.21■■□□□ 1.79
COL9A2-204ENST00000427563 PCDH11XQ9BZA7 1347 aa26.21■■□□□ 1.79
COL9A2-204ENST00000427563 PCDH11YQ9BZA8 1340 aa26.21■■□□□ 1.79
COL9A2-204ENST00000427563 LRRC4BQ9NT99 713 aa26.21■■□□□ 1.79
COL9A2-204ENST00000427563 PDGFDQ9GZP0 370 aaPredicted RBP26.2■■□□□ 1.78
COL9A2-204ENST00000427563 SYTL4Q96C24 671 aaPredicted RBP26.18■■□□□ 1.78
COL9A2-204ENST00000427563 CC2D1BQ5T0F9 858 aaKnown RBP26.16■■□□□ 1.78
COL9A2-204ENST00000427563 NPC1L1Q9UHC9 1359 aa26.15■■□□□ 1.78
COL9A2-204ENST00000427563 IL13P35225 146 aa26.14■■□□□ 1.78
COL9A2-204ENST00000427563 NKX1-1Q15270 411 aaPredicted RBP26.14■■□□□ 1.78
COL9A2-204ENST00000427563 SLC15A2Q16348 729 aa26.14■■□□□ 1.78
COL9A2-204ENST00000427563 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.77
COL9A2-204ENST00000427563 KCNQ4P56696 695 aa26.13■■□□□ 1.77
COL9A2-204ENST00000427563 ZNF827Q17R98 1081 aa26.13■■□□□ 1.77
COL9A2-204ENST00000427563 AEBP1Q8IUX7 1158 aa26.13■■□□□ 1.77
COL9A2-204ENST00000427563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.13■■□□□ 1.772e-6■□□□□ 11
COL9A2-204ENST00000427563 MTHFSP49914 203 aa26.12■■□□□ 1.77
COL9A2-204ENST00000427563 SPG7Q9UQ90 795 aa26.12■■□□□ 1.77
COL9A2-204ENST00000427563 STK32BQ9NY57 414 aa26.11■■□□□ 1.77
COL9A2-204ENST00000427563 PLEKHG2Q9H7P9 1386 aa26.09■■□□□ 1.77
COL9A2-204ENST00000427563 QSER1Q2KHR3 1735 aa26.09■■□□□ 1.77
COL9A2-204ENST00000427563 PHKG2P15735 406 aa26.09■■□□□ 1.77
COL9A2-204ENST00000427563 SLC27A3Q5K4L6 730 aa26.08■■□□□ 1.77
COL9A2-204ENST00000427563 AKT1S1Q96B36 256 aa26.08■■□□□ 1.77
COL9A2-204ENST00000427563 KDRP35968 1356 aa26.07■■□□□ 1.76
COL9A2-204ENST00000427563 COL3A1P02461 1466 aaPredicted RBP26.07■■□□□ 1.76
COL9A2-204ENST00000427563 CNGB1Q14028 1251 aaPredicted RBP26.07■■□□□ 1.76
COL9A2-204ENST00000427563 TAF1LQ8IZX4 1826 aa26.07■■□□□ 1.76
COL9A2-204ENST00000427563 MPRIPQ6WCQ1 1025 aa26.06■■□□□ 1.76
COL9A2-204ENST00000427563 SULT6B1Q6IMI4 303 aa26.05■■□□□ 1.76
COL9A2-204ENST00000427563 IFNL2Q8IZJ0 200 aa26.05■■□□□ 1.76
COL9A2-204ENST00000427563 PIGBQ92521 554 aa26.05■■□□□ 1.76
COL9A2-204ENST00000427563 C5P01031 1676 aa26.04■■□□□ 1.76
COL9A2-204ENST00000427563 SPON1Q9HCB6 807 aa26.04■■□□□ 1.76
COL9A2-204ENST00000427563 ZBTB7AO95365 584 aa26.03■■□□□ 1.76
COL9A2-204ENST00000427563 CCNL1Q9UK58 526 aaPredicted RBP26.02■■□□□ 1.76
COL9A2-204ENST00000427563 PALLDQ8WX93 1383 aa26.02■■□□□ 1.76
COL9A2-204ENST00000427563 KDM6AO15550 1401 aaPredicted RBP26.02■■□□□ 1.76
COL9A2-204ENST00000427563 PTGER2P43116 358 aa26■■□□□ 1.75
COL9A2-204ENST00000427563 PLEKHO1Q53GL0 409 aaPredicted RBP25.99■■□□□ 1.75
COL9A2-204ENST00000427563 PNPLA7Q6ZV29 1317 aa25.98■■□□□ 1.75
COL9A2-204ENST00000427563 COL24A1Q17RW2 1714 aa25.98■■□□□ 1.75
COL9A2-204ENST00000427563 ZNF530Q6P9A1 599 aaPredicted RBP25.98■■□□□ 1.75
COL9A2-204ENST00000427563 ATF5Q9Y2D1 282 aaPredicted RBP25.98■■□□□ 1.75
COL9A2-204ENST00000427563 SGIP1Q9BQI5 828 aa25.97■■□□□ 1.75
COL9A2-204ENST00000427563 HMOX1P09601 288 aa25.96■■□□□ 1.75
COL9A2-204ENST00000427563 AMOTQ4VCS5 1084 aa25.96■■□□□ 1.75
COL9A2-204ENST00000427563 ASAP1Q9ULH1 1129 aa25.96■■□□□ 1.75
COL9A2-204ENST00000427563 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.75
COL9A2-204ENST00000427563 SCN11AQ9UI33 1791 aa25.95■■□□□ 1.75
COL9A2-204ENST00000427563 DIAPH1O60610 1272 aaKnown RBP25.95■■□□□ 1.74
COL9A2-204ENST00000427563 TMOD3Q9NYL9 352 aa25.95■■□□□ 1.74
COL9A2-204ENST00000427563 C4BP0C0L5 1744 aa25.94■■□□□ 1.74
COL9A2-204ENST00000427563 SMARCC1Q92922 1105 aaPredicted RBP25.93■■□□□ 1.74
COL9A2-204ENST00000427563 DCAF5Q96JK2 942 aa25.93■■□□□ 1.74
COL9A2-204ENST00000427563 MTFR1LQ9H019 292 aa25.93■■□□□ 1.74
COL9A2-204ENST00000427563 ATG3Q9NT62 314 aa25.93■■□□□ 1.74
COL9A2-204ENST00000427563 ERVV-2B6SEH9 535 aa25.91■■□□□ 1.74
COL9A2-204ENST00000427563 AMIGO3Q86WK7 504 aa25.91■■□□□ 1.74
COL9A2-204ENST00000427563 TFCP2L1Q9NZI6 479 aa25.91■■□□□ 1.74
COL9A2-204ENST00000427563 UBR3Q6ZT12 1888 aa25.91■■□□□ 1.74
COL9A2-204ENST00000427563 ADAMTS7Q9UKP4 1686 aa25.9■■□□□ 1.74
COL9A2-204ENST00000427563 LOC102724428A0A0B4J2F2 783 aa25.89■■□□□ 1.74
COL9A2-204ENST00000427563 HSP90AB1P08238 724 aaKnown RBP25.89■■□□□ 1.74
COL9A2-204ENST00000427563 PPP2R1AP30153 589 aa25.89■■□□□ 1.74
COL9A2-204ENST00000427563 SIK1P57059 783 aa25.89■■□□□ 1.74
COL9A2-204ENST00000427563 ITPK1Q13572 414 aa25.88■■□□□ 1.73
COL9A2-204ENST00000427563 COL23A1Q86Y22 540 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-204ENST00000427563 SLC4A9Q96Q91 983 aa25.88■■□□□ 1.73
COL9A2-204ENST00000427563 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-204ENST00000427563 ZNF831Q5JPB2 1677 aa25.87■■□□□ 1.73
COL9A2-204ENST00000427563 C1orf141Q5JVX7 400 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms