RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
HLA-DQB2-230ENST00000427449 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
HLA-DQB2-230ENST00000427449 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
HLA-DQB2-230ENST00000427449 HSP90AB2PQ58FF8 381 aa22.22■■□□□ 1.15
HLA-DQB2-230ENST00000427449 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
HLA-DQB2-230ENST00000427449 TAF1LQ8IZX4 1826 aa22.21■■□□□ 1.15
HLA-DQB2-230ENST00000427449 KAT6BQ8WYB5 2073 aa22.21■■□□□ 1.15
HLA-DQB2-230ENST00000427449 AMPHP49418 695 aa22.2■■□□□ 1.14
HLA-DQB2-230ENST00000427449 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
HLA-DQB2-230ENST00000427449 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
HLA-DQB2-230ENST00000427449 KIF7Q2M1P5 1343 aa22.17■■□□□ 1.14
HLA-DQB2-230ENST00000427449 ACSBG1Q96GR2 724 aa22.15■■□□□ 1.14
HLA-DQB2-230ENST00000427449 POLKQ9UBT6 870 aa22.15■■□□□ 1.14
HLA-DQB2-230ENST00000427449 C5P01031 1676 aa22.14■■□□□ 1.14
HLA-DQB2-230ENST00000427449 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.14
HLA-DQB2-230ENST00000427449 PANK3Q9H999 370 aa22.14■■□□□ 1.13
HLA-DQB2-230ENST00000427449 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
HLA-DQB2-230ENST00000427449 TXNRD1Q16881 649 aa22.12■■□□□ 1.13
HLA-DQB2-230ENST00000427449 PDGFDQ9GZP0 370 aaPredicted RBP22.11■■□□□ 1.13
HLA-DQB2-230ENST00000427449 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
HLA-DQB2-230ENST00000427449 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.13
HLA-DQB2-230ENST00000427449 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
HLA-DQB2-230ENST00000427449 POLR3GLQ9BT43 218 aa22.08■■□□□ 1.13
HLA-DQB2-230ENST00000427449 CYP27B1O15528 508 aa22.07■■□□□ 1.12
HLA-DQB2-230ENST00000427449 PER1O15534 1290 aaPredicted RBP22.06■■□□□ 1.12
HLA-DQB2-230ENST00000427449 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
HLA-DQB2-230ENST00000427449 EYA1Q99502 592 aa22.06■■□□□ 1.12
HLA-DQB2-230ENST00000427449 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
HLA-DQB2-230ENST00000427449 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
HLA-DQB2-230ENST00000427449 UBR3Q6ZT12 1888 aa22.05■■□□□ 1.12
HLA-DQB2-230ENST00000427449 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
HLA-DQB2-230ENST00000427449 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
HLA-DQB2-230ENST00000427449 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
HLA-DQB2-230ENST00000427449 ZNF827Q17R98 1081 aa22.03■■□□□ 1.12
HLA-DQB2-230ENST00000427449 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
HLA-DQB2-230ENST00000427449 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
HLA-DQB2-230ENST00000427449 NBPF14Q5TI25 921 aa22.02■■□□□ 1.12
HLA-DQB2-230ENST00000427449 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
HLA-DQB2-230ENST00000427449 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
HLA-DQB2-230ENST00000427449 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
HLA-DQB2-230ENST00000427449 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
HLA-DQB2-230ENST00000427449 C4BP0C0L5 1744 aa22■■□□□ 1.11
HLA-DQB2-230ENST00000427449 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
HLA-DQB2-230ENST00000427449 TNNT2P45379 298 aaPredicted RBP22■■□□□ 1.11
HLA-DQB2-230ENST00000427449 SLC15A2Q16348 729 aa22■■□□□ 1.11
HLA-DQB2-230ENST00000427449 RAPGEF4Q8WZA2 1011 aa22■■□□□ 1.11
HLA-DQB2-230ENST00000427449 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
HLA-DQB2-230ENST00000427449 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
HLA-DQB2-230ENST00000427449 KDRP35968 1356 aa21.99■■□□□ 1.11
HLA-DQB2-230ENST00000427449 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
HLA-DQB2-230ENST00000427449 PTGER2P43116 358 aa21.98■■□□□ 1.11
HLA-DQB2-230ENST00000427449 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
HLA-DQB2-230ENST00000427449 SGIP1Q9BQI5 828 aa21.98■■□□□ 1.11
HLA-DQB2-230ENST00000427449 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
HLA-DQB2-230ENST00000427449 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
HLA-DQB2-230ENST00000427449 KCNQ4P56696 695 aa21.95■■□□□ 1.1
HLA-DQB2-230ENST00000427449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.94■■□□□ 1.1
HLA-DQB2-230ENST00000427449 TJP1Q07157 1748 aa21.92■■□□□ 1.1
HLA-DQB2-230ENST00000427449 PNPLA7Q6ZV29 1317 aa21.92■■□□□ 1.1
HLA-DQB2-230ENST00000427449 SLC27A3Q5K4L6 730 aa21.92■■□□□ 1.1
HLA-DQB2-230ENST00000427449 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
HLA-DQB2-230ENST00000427449 STK32BQ9NY57 414 aa21.92■■□□□ 1.1
HLA-DQB2-230ENST00000427449 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
HLA-DQB2-230ENST00000427449 SPON1Q9HCB6 807 aa21.91■■□□□ 1.1
HLA-DQB2-230ENST00000427449 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
HLA-DQB2-230ENST00000427449 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
HLA-DQB2-230ENST00000427449 SIPA1L3O60292 1781 aaPredicted RBP21.9■■□□□ 1.1
HLA-DQB2-230ENST00000427449 PHKG2P15735 406 aa21.9■■□□□ 1.1
HLA-DQB2-230ENST00000427449 IL13P35225 146 aa21.9■■□□□ 1.1
HLA-DQB2-230ENST00000427449 SYTL4Q96C24 671 aaPredicted RBP21.9■■□□□ 1.1
HLA-DQB2-230ENST00000427449 ZBTB7AO95365 584 aa21.89■■□□□ 1.09
HLA-DQB2-230ENST00000427449 MRC1P22897 1456 aa21.89■■□□□ 1.09
HLA-DQB2-230ENST00000427449 C4AP0C0L4 1744 aa21.89■■□□□ 1.09
HLA-DQB2-230ENST00000427449 MYH14Q7Z406 1995 aaKnown RBP21.88■■□□□ 1.09
HLA-DQB2-230ENST00000427449 UBR2Q8IWV8 1755 aa21.87■■□□□ 1.09
HLA-DQB2-230ENST00000427449 PIGBQ92521 554 aa21.87■■□□□ 1.09
HLA-DQB2-230ENST00000427449 AMIGO3Q86WK7 504 aa21.86■■□□□ 1.09
HLA-DQB2-230ENST00000427449 UTRNP46939 3433 aa21.86■■□□□ 1.09
HLA-DQB2-230ENST00000427449 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
HLA-DQB2-230ENST00000427449 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
HLA-DQB2-230ENST00000427449 CCNL1Q9UK58 526 aaPredicted RBP21.84■■□□□ 1.09
HLA-DQB2-230ENST00000427449 MTHFSP49914 203 aa21.82■■□□□ 1.08
HLA-DQB2-230ENST00000427449 MPRIPQ6WCQ1 1025 aa21.82■■□□□ 1.08
HLA-DQB2-230ENST00000427449 ATF5Q9Y2D1 282 aaPredicted RBP21.82■■□□□ 1.08
HLA-DQB2-230ENST00000427449 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
HLA-DQB2-230ENST00000427449 GOLGB1Q14789 3259 aaKnown RBP21.82■■□□□ 1.08
HLA-DQB2-230ENST00000427449 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
HLA-DQB2-230ENST00000427449 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
HLA-DQB2-230ENST00000427449 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
HLA-DQB2-230ENST00000427449 SLC4A9Q96Q91 983 aa21.79■■□□□ 1.08
HLA-DQB2-230ENST00000427449 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
HLA-DQB2-230ENST00000427449 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
HLA-DQB2-230ENST00000427449 KIF13BQ9NQT8 1826 aa21.78■■□□□ 1.08
HLA-DQB2-230ENST00000427449 KCPQ6ZWJ8 1503 aa21.77■■□□□ 1.08
HLA-DQB2-230ENST00000427449 ITPK1Q13572 414 aa21.77■■□□□ 1.08
HLA-DQB2-230ENST00000427449 ATG3Q9NT62 314 aa21.77■■□□□ 1.08
HLA-DQB2-230ENST00000427449 COL23A1Q86Y22 540 aaPredicted RBP21.76■■□□□ 1.07
HLA-DQB2-230ENST00000427449 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
HLA-DQB2-230ENST00000427449 CHD4Q14839 1912 aa21.76■■□□□ 1.07
HLA-DQB2-230ENST00000427449 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms