RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
CHEK1-202ENST00000427383 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
CHEK1-202ENST00000427383 HTATSF1O43719 755 aaKnown RBP22.33■■□□□ 1.16
CHEK1-202ENST00000427383 ZNF853P0CG23 659 aa22.33■■□□□ 1.16
CHEK1-202ENST00000427383 DCTN1Q14203 1278 aa22.33■■□□□ 1.16
CHEK1-202ENST00000427383 CRB1P82279 1406 aa22.33■■□□□ 1.16
CHEK1-202ENST00000427383 IFT57Q9NWB7 429 aa22.32■■□□□ 1.16
CHEK1-202ENST00000427383 AMOTQ4VCS5 1084 aa22.31■■□□□ 1.16
CHEK1-202ENST00000427383 OVOS2A0A0G2JMS6 1433 aa22.31■■□□□ 1.16
CHEK1-202ENST00000427383 GNAT3A8MTJ3 354 aa22.3■■□□□ 1.16
CHEK1-202ENST00000427383 MCM10Q7L590 875 aa22.3■■□□□ 1.16
CHEK1-202ENST00000427383 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
CHEK1-202ENST00000427383 BTG4Q9NY30 223 aa22.3■■□□□ 1.16
CHEK1-202ENST00000427383 CARD10Q9BWT7 1032 aa22.3■■□□□ 1.16
CHEK1-202ENST00000427383 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
CHEK1-202ENST00000427383 SHANK3Q9BYB0 1731 aa22.29■■□□□ 1.16
CHEK1-202ENST00000427383 PLEKHO1Q53GL0 409 aaPredicted RBP22.29■■□□□ 1.16
CHEK1-202ENST00000427383 CFAP44Q96MT7 982 aa22.29■■□□□ 1.16
CHEK1-202ENST00000427383 CEMIPQ8WUJ3 1361 aa22.28■■□□□ 1.16
CHEK1-202ENST00000427383 LARP1Q6PKG0 1096 aaKnown RBP22.28■■□□□ 1.16
CHEK1-202ENST00000427383 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
CHEK1-202ENST00000427383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.28■■□□□ 1.163e-6■■□□□ 11.4
CHEK1-202ENST00000427383 SLIT2O94813 1529 aa22.27■■□□□ 1.16
CHEK1-202ENST00000427383 GNAI1P63096 354 aa22.27■■□□□ 1.16
CHEK1-202ENST00000427383 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
CHEK1-202ENST00000427383 RTF1Q92541 710 aaKnown RBP22.27■■□□□ 1.16
CHEK1-202ENST00000427383 STRN4Q9NRL3 753 aa22.26■■□□□ 1.15
CHEK1-202ENST00000427383 LRP6O75581 1613 aa22.26■■□□□ 1.15
CHEK1-202ENST00000427383 SIPA1L3O60292 1781 aaPredicted RBP22.26■■□□□ 1.15
CHEK1-202ENST00000427383 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
CHEK1-202ENST00000427383 AKAP4Q5JQC9 854 aa22.26■■□□□ 1.15
CHEK1-202ENST00000427383 SCN11AQ9UI33 1791 aa22.25■■□□□ 1.15
CHEK1-202ENST00000427383 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
CHEK1-202ENST00000427383 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
CHEK1-202ENST00000427383 IL17REQ8NFR9 667 aa22.25■■□□□ 1.15
CHEK1-202ENST00000427383 SPATA31A6Q5VVP1 1343 aa22.25■■□□□ 1.15
CHEK1-202ENST00000427383 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
CHEK1-202ENST00000427383 CHL1O00533 1208 aa22.23■■□□□ 1.15
CHEK1-202ENST00000427383 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
CHEK1-202ENST00000427383 EVA1CP58658 441 aa22.23■■□□□ 1.15
CHEK1-202ENST00000427383 DISP2A7MBM2 1401 aa22.23■■□□□ 1.15
CHEK1-202ENST00000427383 HSPA1LP34931 641 aa22.23■■□□□ 1.15
CHEK1-202ENST00000427383 RRP1P56182 461 aaKnown RBP22.23■■□□□ 1.15
CHEK1-202ENST00000427383 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
CHEK1-202ENST00000427383 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
CHEK1-202ENST00000427383 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
CHEK1-202ENST00000427383 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
CHEK1-202ENST00000427383 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
CHEK1-202ENST00000427383 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
CHEK1-202ENST00000427383 NEFLP07196 543 aa22.2■■□□□ 1.15
CHEK1-202ENST00000427383 SPG7Q9UQ90 795 aa22.2■■□□□ 1.15
CHEK1-202ENST00000427383 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.2■■□□□ 1.14
CHEK1-202ENST00000427383 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
CHEK1-202ENST00000427383 KDM6AO15550 1401 aaPredicted RBP22.2■■□□□ 1.14
CHEK1-202ENST00000427383 IL2RBP14784 551 aa22.19■■□□□ 1.14
CHEK1-202ENST00000427383 MRC1P22897 1456 aa22.19■■□□□ 1.14
CHEK1-202ENST00000427383 PHKG2P15735 406 aa22.18■■□□□ 1.14
CHEK1-202ENST00000427383 RARSP54136 660 aaKnown RBP22.18■■□□□ 1.14
CHEK1-202ENST00000427383 FKBP8Q14318 412 aa22.18■■□□□ 1.14
CHEK1-202ENST00000427383 LGR6Q9HBX8 967 aa22.18■■□□□ 1.14
CHEK1-202ENST00000427383 CYP27B1O15528 508 aa22.17■■□□□ 1.14
CHEK1-202ENST00000427383 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
CHEK1-202ENST00000427383 RNMTO43148 476 aaKnown RBP22.16■■□□□ 1.14
CHEK1-202ENST00000427383 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
CHEK1-202ENST00000427383 BCL9LQ86UU0 1499 aa22.15■■□□□ 1.14
CHEK1-202ENST00000427383 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
CHEK1-202ENST00000427383 BCAR3O75815 825 aa22.14■■□□□ 1.14
CHEK1-202ENST00000427383 IRX6P78412 446 aaPredicted RBP22.14■■□□□ 1.14
CHEK1-202ENST00000427383 PCDH11XQ9BZA7 1347 aa22.14■■□□□ 1.14
CHEK1-202ENST00000427383 PCDH11YQ9BZA8 1340 aa22.14■■□□□ 1.14
CHEK1-202ENST00000427383 TAF7Q15545 349 aaPredicted RBP22.14■■□□□ 1.13
CHEK1-202ENST00000427383 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
CHEK1-202ENST00000427383 TSPYL4Q9UJ04 414 aa22.14■■□□□ 1.13
CHEK1-202ENST00000427383 SPATA31A1Q5TZJ5 1347 aa22.14■■□□□ 1.13
CHEK1-202ENST00000427383 TSPYL6Q8N831 410 aa22.13■■□□□ 1.13
CHEK1-202ENST00000427383 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
CHEK1-202ENST00000427383 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
CHEK1-202ENST00000427383 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
CHEK1-202ENST00000427383 FNBP4Q8N3X1 1017 aaPredicted RBP22.12■■□□□ 1.13
CHEK1-202ENST00000427383 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
CHEK1-202ENST00000427383 TOGARAM1Q9Y4F4 1720 aa22.12■■□□□ 1.13
CHEK1-202ENST00000427383 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 VAMP4O75379 141 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 PLIN1O60240 522 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 DCAF5Q96JK2 942 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 C8orf37Q96NL8 207 aa22.11■■□□□ 1.13
CHEK1-202ENST00000427383 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
CHEK1-202ENST00000427383 TNS2Q63HR2 1409 aa22.1■■□□□ 1.13
CHEK1-202ENST00000427383 TEFQ10587 303 aa22.1■■□□□ 1.13
CHEK1-202ENST00000427383 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
CHEK1-202ENST00000427383 UNC5CLQ8IV45 518 aa22.1■■□□□ 1.13
CHEK1-202ENST00000427383 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
CHEK1-202ENST00000427383 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
CHEK1-202ENST00000427383 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
CHEK1-202ENST00000427383 ERICH6BQ5W0A0 696 aa22.09■■□□□ 1.13
CHEK1-202ENST00000427383 SSH1Q8WYL5 1049 aa22.09■■□□□ 1.13
CHEK1-202ENST00000427383 NKX1-1Q15270 411 aaPredicted RBP22.08■■□□□ 1.13
CHEK1-202ENST00000427383 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.07■■□□□ 1.12
CHEK1-202ENST00000427383 NGLY1Q96IV0 654 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms