RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 VAMP4O75379 141 aa18.17■□□□□ 0.5
HDAC7-209ENST00000427332 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
HDAC7-209ENST00000427332 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
HDAC7-209ENST00000427332 IL17REQ8NFR9 667 aa18.17■□□□□ 0.5
HDAC7-209ENST00000427332 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
HDAC7-209ENST00000427332 NFAT5O94916 1531 aa18.16■□□□□ 0.5
HDAC7-209ENST00000427332 KDRP35968 1356 aa18.16■□□□□ 0.5
HDAC7-209ENST00000427332 USP19O94966 1318 aa18.15■□□□□ 0.5
HDAC7-209ENST00000427332 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
HDAC7-209ENST00000427332 LTN1O94822 1766 aa18.15■□□□□ 0.5
HDAC7-209ENST00000427332 PRKCSHP14314 528 aaPredicted RBP18.15■□□□□ 0.5
HDAC7-209ENST00000427332 DZIP1LQ8IYY4 767 aaKnown RBP18.14■□□□□ 0.49
HDAC7-209ENST00000427332 DLG5Q8TDM6 1919 aa18.14■□□□□ 0.49
HDAC7-209ENST00000427332 ERBB3P21860 1342 aa18.14■□□□□ 0.49
HDAC7-209ENST00000427332 DCCP43146 1447 aa18.14■□□□□ 0.49
HDAC7-209ENST00000427332 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
HDAC7-209ENST00000427332 TNS3Q68CZ2 1445 aa18.12■□□□□ 0.49
HDAC7-209ENST00000427332 CHL1O00533 1208 aa18.12■□□□□ 0.49
HDAC7-209ENST00000427332 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
HDAC7-209ENST00000427332 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
HDAC7-209ENST00000427332 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
HDAC7-209ENST00000427332 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
HDAC7-209ENST00000427332 RGS3P49796 1198 aa18.11■□□□□ 0.49
HDAC7-209ENST00000427332 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
HDAC7-209ENST00000427332 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-209ENST00000427332 IGHDP01880 384 aa18.11■□□□□ 0.49
HDAC7-209ENST00000427332 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
HDAC7-209ENST00000427332 KCNQ3O43525 872 aa18.1■□□□□ 0.49
HDAC7-209ENST00000427332 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 PCDHB15Q9Y5E8 787 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
HDAC7-209ENST00000427332 PXDNQ92626 1479 aa18.09■□□□□ 0.49
HDAC7-209ENST00000427332 MAP3K5Q99683 1374 aa18.08■□□□□ 0.49
HDAC7-209ENST00000427332 RGPD1P0DJD0 1748 aa18.08■□□□□ 0.48
HDAC7-209ENST00000427332 TRPM3Q9HCF6 1732 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-209ENST00000427332 TEFQ10587 303 aa18.08■□□□□ 0.48
HDAC7-209ENST00000427332 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-209ENST00000427332 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
HDAC7-209ENST00000427332 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
HDAC7-209ENST00000427332 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
HDAC7-209ENST00000427332 SOS2Q07890 1332 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-209ENST00000427332 CRB1P82279 1406 aa18.07■□□□□ 0.48
HDAC7-209ENST00000427332 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-209ENST00000427332 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
HDAC7-209ENST00000427332 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
HDAC7-209ENST00000427332 KIF1AQ12756 1690 aa18.06■□□□□ 0.48
HDAC7-209ENST00000427332 EVA1CP58658 441 aa18.06■□□□□ 0.48
HDAC7-209ENST00000427332 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
HDAC7-209ENST00000427332 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 ANXA1P04083 346 aa18.05■□□□□ 0.48
HDAC7-209ENST00000427332 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
HDAC7-209ENST00000427332 G2E3Q7L622 706 aa18.05■□□□□ 0.48
HDAC7-209ENST00000427332 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-209ENST00000427332 F6X3S4 739 aa18.04■□□□□ 0.48
HDAC7-209ENST00000427332 SLC39A6Q13433 755 aa18.04■□□□□ 0.48
HDAC7-209ENST00000427332 SLIT3O75094 1523 aa18.04■□□□□ 0.48
HDAC7-209ENST00000427332 RGPD5Q99666 1765 aa18.04■□□□□ 0.48
HDAC7-209ENST00000427332 ALDH1L2Q3SY69 923 aa18.03■□□□□ 0.48
HDAC7-209ENST00000427332 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
HDAC7-209ENST00000427332 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
HDAC7-209ENST00000427332 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-209ENST00000427332 DDX54Q8TDD1 881 aaKnown RBP18.02■□□□□ 0.48
HDAC7-209ENST00000427332 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
HDAC7-209ENST00000427332 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
HDAC7-209ENST00000427332 BTG4Q9NY30 223 aa18.01■□□□□ 0.47
HDAC7-209ENST00000427332 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
HDAC7-209ENST00000427332 RNMTO43148 476 aaKnown RBP17.99■□□□□ 0.47
HDAC7-209ENST00000427332 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
HDAC7-209ENST00000427332 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-209ENST00000427332 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
HDAC7-209ENST00000427332 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
HDAC7-209ENST00000427332 A0A0G2JS52 829 aa17.98■□□□□ 0.47
HDAC7-209ENST00000427332 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
HDAC7-209ENST00000427332 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
HDAC7-209ENST00000427332 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
HDAC7-209ENST00000427332 CYP27B1O15528 508 aa17.97■□□□□ 0.47
HDAC7-209ENST00000427332 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-209ENST00000427332 MEGF6O75095 1541 aa17.97■□□□□ 0.47
HDAC7-209ENST00000427332 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
HDAC7-209ENST00000427332 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
HDAC7-209ENST00000427332 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-209ENST00000427332 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
HDAC7-209ENST00000427332 KAT6BQ8WYB5 2073 aa17.96■□□□□ 0.47
HDAC7-209ENST00000427332 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.46
HDAC7-209ENST00000427332 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
HDAC7-209ENST00000427332 MS4A1P11836 297 aa17.95■□□□□ 0.46
HDAC7-209ENST00000427332 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-209ENST00000427332 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
HDAC7-209ENST00000427332 PHKG2P15735 406 aa17.94■□□□□ 0.46
HDAC7-209ENST00000427332 CAMTA1Q9Y6Y1 1673 aa17.94■□□□□ 0.46
HDAC7-209ENST00000427332 WDR17Q8IZU2 1322 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms