RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
LINC00476-203ENST00000427259 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
LINC00476-203ENST00000427259 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
LINC00476-203ENST00000427259 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
LINC00476-203ENST00000427259 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
LINC00476-203ENST00000427259 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
LINC00476-203ENST00000427259 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
LINC00476-203ENST00000427259 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
LINC00476-203ENST00000427259 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
LINC00476-203ENST00000427259 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
LINC00476-203ENST00000427259 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
LINC00476-203ENST00000427259 EMILIN1Q9Y6C2 1016 aa18.32■□□□□ 0.52
LINC00476-203ENST00000427259 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
LINC00476-203ENST00000427259 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
LINC00476-203ENST00000427259 INSRP06213 1382 aa18.3■□□□□ 0.52
LINC00476-203ENST00000427259 FLT4P35916 1363 aa18.3■□□□□ 0.52
LINC00476-203ENST00000427259 EIF4G2P78344 907 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC00476-203ENST00000427259 LY75O60449 1722 aa18.28■□□□□ 0.52
LINC00476-203ENST00000427259 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
LINC00476-203ENST00000427259 NSD2O96028 1365 aa18.28■□□□□ 0.52
LINC00476-203ENST00000427259 TUBGCP6Q96RT7 1819 aa18.28■□□□□ 0.52
LINC00476-203ENST00000427259 PKD1L3Q7Z443 1732 aa18.26■□□□□ 0.51
LINC00476-203ENST00000427259 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
LINC00476-203ENST00000427259 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
LINC00476-203ENST00000427259 NCAPD2Q15021 1401 aa18.24■□□□□ 0.51
LINC00476-203ENST00000427259 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
LINC00476-203ENST00000427259 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
LINC00476-203ENST00000427259 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
LINC00476-203ENST00000427259 ITGB4P16144 1822 aa18.23■□□□□ 0.51
LINC00476-203ENST00000427259 KCNQ4P56696 695 aa18.23■□□□□ 0.51
LINC00476-203ENST00000427259 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
LINC00476-203ENST00000427259 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
LINC00476-203ENST00000427259 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
LINC00476-203ENST00000427259 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
LINC00476-203ENST00000427259 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
LINC00476-203ENST00000427259 PANK3Q9H999 370 aa18.22■□□□□ 0.51
LINC00476-203ENST00000427259 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
LINC00476-203ENST00000427259 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
LINC00476-203ENST00000427259 SYTL4Q96C24 671 aaPredicted RBP18.21■□□□□ 0.51
LINC00476-203ENST00000427259 QSER1Q2KHR3 1735 aa18.2■□□□□ 0.5
LINC00476-203ENST00000427259 SPON1Q9HCB6 807 aa18.2■□□□□ 0.5
LINC00476-203ENST00000427259 STK32BQ9NY57 414 aa18.2■□□□□ 0.5
LINC00476-203ENST00000427259 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
LINC00476-203ENST00000427259 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
LINC00476-203ENST00000427259 CYP27B1O15528 508 aa18.18■□□□□ 0.5
LINC00476-203ENST00000427259 TATP17735 454 aaPredicted RBP18.18■□□□□ 0.5
LINC00476-203ENST00000427259 PTGER2P43116 358 aa18.18■□□□□ 0.5
LINC00476-203ENST00000427259 EYA1Q99502 592 aa18.17■□□□□ 0.5
LINC00476-203ENST00000427259 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
LINC00476-203ENST00000427259 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
LINC00476-203ENST00000427259 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
LINC00476-203ENST00000427259 C5P01031 1676 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 EIF4A2Q14240 407 aaKnown RBP18.15■□□□□ 0.5
LINC00476-203ENST00000427259 AKT1S1Q96B36 256 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 COL24A1Q17RW2 1714 aa18.15■□□□□ 0.5
LINC00476-203ENST00000427259 SGIP1Q9BQI5 828 aa18.13■□□□□ 0.49
LINC00476-203ENST00000427259 PPP1R1BQ9UD71 204 aaPredicted RBP18.13■□□□□ 0.49
LINC00476-203ENST00000427259 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
LINC00476-203ENST00000427259 PNPLA7Q6ZV29 1317 aa18.11■□□□□ 0.49
LINC00476-203ENST00000427259 MPRIPQ6WCQ1 1025 aa18.09■□□□□ 0.49
LINC00476-203ENST00000427259 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
LINC00476-203ENST00000427259 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
LINC00476-203ENST00000427259 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.49
LINC00476-203ENST00000427259 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
LINC00476-203ENST00000427259 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
LINC00476-203ENST00000427259 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
LINC00476-203ENST00000427259 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
LINC00476-203ENST00000427259 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
LINC00476-203ENST00000427259 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
LINC00476-203ENST00000427259 PIGBQ92521 554 aa18.06■□□□□ 0.48
LINC00476-203ENST00000427259 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
LINC00476-203ENST00000427259 PHKG2P15735 406 aa18.05■□□□□ 0.48
LINC00476-203ENST00000427259 FHDC1Q9C0D6 1143 aaPredicted RBP18.05■□□□□ 0.48
LINC00476-203ENST00000427259 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
LINC00476-203ENST00000427259 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
LINC00476-203ENST00000427259 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
LINC00476-203ENST00000427259 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
LINC00476-203ENST00000427259 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
LINC00476-203ENST00000427259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00476-203ENST00000427259 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.48
LINC00476-203ENST00000427259 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
LINC00476-203ENST00000427259 SMIM5Q71RC9 77 aa18.02■□□□□ 0.48
LINC00476-203ENST00000427259 COL23A1Q86Y22 540 aaPredicted RBP18.02■□□□□ 0.48
LINC00476-203ENST00000427259 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
LINC00476-203ENST00000427259 UTRNP46939 3433 aa18.01■□□□□ 0.47
LINC00476-203ENST00000427259 IL13P35225 146 aa18■□□□□ 0.47
LINC00476-203ENST00000427259 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
LINC00476-203ENST00000427259 ARXQ96QS3 562 aa18■□□□□ 0.47
LINC00476-203ENST00000427259 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
LINC00476-203ENST00000427259 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
LINC00476-203ENST00000427259 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
LINC00476-203ENST00000427259 KDRP35968 1356 aa17.98■□□□□ 0.47
LINC00476-203ENST00000427259 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
LINC00476-203ENST00000427259 ITPK1Q13572 414 aa17.97■□□□□ 0.47
LINC00476-203ENST00000427259 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
LINC00476-203ENST00000427259 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
LINC00476-203ENST00000427259 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms