RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
VNN3-208ENST00000427187 NSD2O96028 1365 aa12.35□□□□□ -0.43
VNN3-208ENST00000427187 LY75O60449 1722 aa12.35□□□□□ -0.43
VNN3-208ENST00000427187 MSH5O43196 834 aa12.35□□□□□ -0.43
VNN3-208ENST00000427187 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
VNN3-208ENST00000427187 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
VNN3-208ENST00000427187 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
VNN3-208ENST00000427187 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
VNN3-208ENST00000427187 IP6K1Q92551 441 aa12.34□□□□□ -0.43
VNN3-208ENST00000427187 CARD11Q9BXL7 1154 aa12.34□□□□□ -0.43
VNN3-208ENST00000427187 FAM208AQ9UK61 1670 aaKnown RBP12.34□□□□□ -0.43
VNN3-208ENST00000427187 ANKRD36BQ8N2N9 1353 aa12.33□□□□□ -0.44
VNN3-208ENST00000427187 MEGF6O75095 1541 aa12.33□□□□□ -0.44
VNN3-208ENST00000427187 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
VNN3-208ENST00000427187 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
VNN3-208ENST00000427187 MAP3K19Q56UN5 1328 aa12.32□□□□□ -0.44
VNN3-208ENST00000427187 HOXC9P31274 260 aa12.31□□□□□ -0.44
VNN3-208ENST00000427187 USHBP1Q8N6Y0 703 aa12.31□□□□□ -0.44
VNN3-208ENST00000427187 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
VNN3-208ENST00000427187 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
VNN3-208ENST00000427187 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
VNN3-208ENST00000427187 ATP10DQ9P241 1426 aa12.29□□□□□ -0.44
VNN3-208ENST00000427187 C5P01031 1676 aa12.29□□□□□ -0.44
VNN3-208ENST00000427187 AMPHP49418 695 aa12.29□□□□□ -0.44
VNN3-208ENST00000427187 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
VNN3-208ENST00000427187 USP47Q96K76 1375 aa12.29□□□□□ -0.44
VNN3-208ENST00000427187 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
VNN3-208ENST00000427187 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
VNN3-208ENST00000427187 COG3Q96JB2 828 aa12.28□□□□□ -0.44
VNN3-208ENST00000427187 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
VNN3-208ENST00000427187 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.45
VNN3-208ENST00000427187 SMIM5Q71RC9 77 aa12.27□□□□□ -0.45
VNN3-208ENST00000427187 NBPF4Q96M43 638 aa12.27□□□□□ -0.45
VNN3-208ENST00000427187 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
VNN3-208ENST00000427187 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
VNN3-208ENST00000427187 PHF14O94880 888 aa12.24□□□□□ -0.45
VNN3-208ENST00000427187 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
VNN3-208ENST00000427187 PALLDQ8WX93 1383 aa12.24□□□□□ -0.45
VNN3-208ENST00000427187 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
VNN3-208ENST00000427187 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
VNN3-208ENST00000427187 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
VNN3-208ENST00000427187 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
VNN3-208ENST00000427187 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
VNN3-208ENST00000427187 TESK2Q96S53 571 aa12.23□□□□□ -0.45
VNN3-208ENST00000427187 ITGB4P16144 1822 aa12.23□□□□□ -0.45
VNN3-208ENST00000427187 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
VNN3-208ENST00000427187 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
VNN3-208ENST00000427187 ADCY9O60503 1353 aa12.22□□□□□ -0.45
VNN3-208ENST00000427187 TATP17735 454 aaPredicted RBP12.22□□□□□ -0.45
VNN3-208ENST00000427187 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
VNN3-208ENST00000427187 SMG6Q86US8 1419 aaKnown RBP12.21□□□□□ -0.45
VNN3-208ENST00000427187 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 AK7Q96M32 723 aa12.21□□□□□ -0.45
VNN3-208ENST00000427187 PUS7Q96PZ0 661 aaKnown RBP12.21□□□□□ -0.45
VNN3-208ENST00000427187 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
VNN3-208ENST00000427187 FYB1O15117 783 aa12.2□□□□□ -0.46
VNN3-208ENST00000427187 CYP27B1O15528 508 aa12.2□□□□□ -0.46
VNN3-208ENST00000427187 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
VNN3-208ENST00000427187 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
VNN3-208ENST00000427187 HSPA6P17066 643 aa12.19□□□□□ -0.46
VNN3-208ENST00000427187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
VNN3-208ENST00000427187 FLAD1Q8NFF5 587 aa12.18□□□□□ -0.46
VNN3-208ENST00000427187 PIGBQ92521 554 aa12.18□□□□□ -0.46
VNN3-208ENST00000427187 INSRP06213 1382 aa12.18□□□□□ -0.46
VNN3-208ENST00000427187 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
VNN3-208ENST00000427187 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
VNN3-208ENST00000427187 FLT4P35916 1363 aa12.17□□□□□ -0.46
VNN3-208ENST00000427187 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
VNN3-208ENST00000427187 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
VNN3-208ENST00000427187 KIF3CO14782 793 aa12.15□□□□□ -0.46
VNN3-208ENST00000427187 SMARCC1Q92922 1105 aaPredicted RBP12.15□□□□□ -0.46
VNN3-208ENST00000427187 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
VNN3-208ENST00000427187 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
VNN3-208ENST00000427187 GNPATO15228 680 aa12.14□□□□□ -0.47
VNN3-208ENST00000427187 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
VNN3-208ENST00000427187 SIK1P57059 783 aa12.14□□□□□ -0.47
VNN3-208ENST00000427187 ITPK1Q13572 414 aa12.14□□□□□ -0.47
VNN3-208ENST00000427187 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
VNN3-208ENST00000427187 CICQ96RK0 1608 aaPredicted RBP12.12□□□□□ -0.47
VNN3-208ENST00000427187 KIAA1551Q9HCM1 1747 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 MMP10P09238 476 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 SSFA2P28290 1259 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 TMF1P82094 1093 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
VNN3-208ENST00000427187 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
VNN3-208ENST00000427187 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
VNN3-208ENST00000427187 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
VNN3-208ENST00000427187 EYA1Q99502 592 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 NCAPD2Q15021 1401 aa12.1□□□□□ -0.47
VNN3-208ENST00000427187 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms