RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 LY75O60449 1722 aa14.29□□□□□ -0.12
HDLBP-213ENST00000427007 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
HDLBP-213ENST00000427007 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
HDLBP-213ENST00000427007 KCNQ4P56696 695 aa14.28□□□□□ -0.12
HDLBP-213ENST00000427007 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
HDLBP-213ENST00000427007 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
HDLBP-213ENST00000427007 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
HDLBP-213ENST00000427007 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
HDLBP-213ENST00000427007 SMG6Q86US8 1419 aaKnown RBP14.27□□□□□ -0.12
HDLBP-213ENST00000427007 NSD2O96028 1365 aa14.27□□□□□ -0.12
HDLBP-213ENST00000427007 SYT17Q9BSW7 474 aa14.27□□□□□ -0.13
HDLBP-213ENST00000427007 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
HDLBP-213ENST00000427007 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
HDLBP-213ENST00000427007 ARXQ96QS3 562 aa14.26□□□□□ -0.13
HDLBP-213ENST00000427007 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
HDLBP-213ENST00000427007 PNPLA7Q6ZV29 1317 aa14.24□□□□□ -0.13
HDLBP-213ENST00000427007 CDCA8Q53HL2 280 aa14.24□□□□□ -0.13
HDLBP-213ENST00000427007 RAPGEF4Q8WZA2 1011 aa14.24□□□□□ -0.13
HDLBP-213ENST00000427007 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
HDLBP-213ENST00000427007 INSRP06213 1382 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 FLT4P35916 1363 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 TFCP2L1Q9NZI6 479 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
HDLBP-213ENST00000427007 TATP17735 454 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-213ENST00000427007 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-213ENST00000427007 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.13
HDLBP-213ENST00000427007 C5P01031 1676 aa14.21□□□□□ -0.13
HDLBP-213ENST00000427007 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
HDLBP-213ENST00000427007 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.14
HDLBP-213ENST00000427007 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.14
HDLBP-213ENST00000427007 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
HDLBP-213ENST00000427007 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
HDLBP-213ENST00000427007 SLC16A10Q8TF71 515 aa14.2□□□□□ -0.14
HDLBP-213ENST00000427007 PKD1L3Q7Z443 1732 aa14.2□□□□□ -0.14
HDLBP-213ENST00000427007 KIF24Q5T7B8 1368 aa14.2□□□□□ -0.14
HDLBP-213ENST00000427007 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
HDLBP-213ENST00000427007 POLD1P28340 1107 aa14.19□□□□□ -0.14
HDLBP-213ENST00000427007 POLR3GLQ9BT43 218 aa14.19□□□□□ -0.14
HDLBP-213ENST00000427007 MAP2P11137 1827 aaKnown RBP14.19□□□□□ -0.14
HDLBP-213ENST00000427007 ITGB4P16144 1822 aa14.19□□□□□ -0.14
HDLBP-213ENST00000427007 CHD4Q14839 1912 aa14.19□□□□□ -0.14
HDLBP-213ENST00000427007 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
HDLBP-213ENST00000427007 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
HDLBP-213ENST00000427007 MSH5O43196 834 aa14.18□□□□□ -0.14
HDLBP-213ENST00000427007 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
HDLBP-213ENST00000427007 UTRNP46939 3433 aa14.18□□□□□ -0.14
HDLBP-213ENST00000427007 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
HDLBP-213ENST00000427007 CYP27B1O15528 508 aa14.16□□□□□ -0.14
HDLBP-213ENST00000427007 GPR162Q16538 588 aa14.16□□□□□ -0.14
HDLBP-213ENST00000427007 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
HDLBP-213ENST00000427007 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
HDLBP-213ENST00000427007 ZNF784Q8NCA9 323 aaPredicted RBP14.16□□□□□ -0.14
HDLBP-213ENST00000427007 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
HDLBP-213ENST00000427007 NLGN2Q8NFZ4 835 aa14.15□□□□□ -0.14
HDLBP-213ENST00000427007 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
HDLBP-213ENST00000427007 NCAPD2Q15021 1401 aa14.15□□□□□ -0.14
HDLBP-213ENST00000427007 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
HDLBP-213ENST00000427007 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
HDLBP-213ENST00000427007 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-213ENST00000427007 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
HDLBP-213ENST00000427007 EYA1Q99502 592 aa14.12□□□□□ -0.15
HDLBP-213ENST00000427007 POLKQ9UBT6 870 aa14.12□□□□□ -0.15
HDLBP-213ENST00000427007 PIGBQ92521 554 aa14.11□□□□□ -0.15
HDLBP-213ENST00000427007 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
HDLBP-213ENST00000427007 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
HDLBP-213ENST00000427007 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
HDLBP-213ENST00000427007 PHF14O94880 888 aa14.09□□□□□ -0.15
HDLBP-213ENST00000427007 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-213ENST00000427007 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
HDLBP-213ENST00000427007 AMIGO3Q86WK7 504 aa14.09□□□□□ -0.15
HDLBP-213ENST00000427007 SMARCC1Q92922 1105 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-213ENST00000427007 AK7Q96M32 723 aa14.09□□□□□ -0.15
HDLBP-213ENST00000427007 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
HDLBP-213ENST00000427007 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.16
HDLBP-213ENST00000427007 PHKG2P15735 406 aa14.07□□□□□ -0.16
HDLBP-213ENST00000427007 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDLBP-213ENST00000427007 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDLBP-213ENST00000427007 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
HDLBP-213ENST00000427007 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
HDLBP-213ENST00000427007 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
HDLBP-213ENST00000427007 GOLGB1Q14789 3259 aaKnown RBP14.06□□□□□ -0.16
HDLBP-213ENST00000427007 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
HDLBP-213ENST00000427007 HMGB2P26583 209 aaKnown RBP14.06□□□□□ -0.16
HDLBP-213ENST00000427007 SIK1P57059 783 aa14.06□□□□□ -0.16
HDLBP-213ENST00000427007 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
HDLBP-213ENST00000427007 PANK3Q9H999 370 aa14.06□□□□□ -0.16
HDLBP-213ENST00000427007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.162e-22■□□□□ 10.4
HDLBP-213ENST00000427007 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
HDLBP-213ENST00000427007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
HDLBP-213ENST00000427007 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
HDLBP-213ENST00000427007 ITPK1Q13572 414 aa14.04□□□□□ -0.16
HDLBP-213ENST00000427007 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
HDLBP-213ENST00000427007 CCER1Q8TC90 406 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-213ENST00000427007 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
HDLBP-213ENST00000427007 GNPATO15228 680 aa14.02□□□□□ -0.17
HDLBP-213ENST00000427007 GRIN3BO60391 1043 aa14.02□□□□□ -0.17
HDLBP-213ENST00000427007 SSFA2P28290 1259 aa14.02□□□□□ -0.17
HDLBP-213ENST00000427007 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms