RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SHANK3Q9BYB0 1731 aa18■□□□□ 0.47
NELFE-203ENST00000426722 DOT1LQ8TEK3 1739 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 FBLN1P23142 703 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
NELFE-203ENST00000426722 ZNF827Q17R98 1081 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 ARXQ96QS3 562 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
NELFE-203ENST00000426722 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
NELFE-203ENST00000426722 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
NELFE-203ENST00000426722 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
NELFE-203ENST00000426722 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
NELFE-203ENST00000426722 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
NELFE-203ENST00000426722 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
NELFE-203ENST00000426722 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
NELFE-203ENST00000426722 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
NELFE-203ENST00000426722 MEGF6O75095 1541 aa17.97■□□□□ 0.47
NELFE-203ENST00000426722 CHD4Q14839 1912 aa17.96■□□□□ 0.47
NELFE-203ENST00000426722 INSRP06213 1382 aa17.96■□□□□ 0.47
NELFE-203ENST00000426722 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
NELFE-203ENST00000426722 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
NELFE-203ENST00000426722 NSD2O96028 1365 aa17.94■□□□□ 0.46
NELFE-203ENST00000426722 FLT4P35916 1363 aa17.94■□□□□ 0.46
NELFE-203ENST00000426722 POLD1P28340 1107 aa17.94■□□□□ 0.46
NELFE-203ENST00000426722 TFCP2L1Q9NZI6 479 aa17.94■□□□□ 0.46
NELFE-203ENST00000426722 PNPLA7Q6ZV29 1317 aa17.93■□□□□ 0.46
NELFE-203ENST00000426722 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
NELFE-203ENST00000426722 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
NELFE-203ENST00000426722 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
NELFE-203ENST00000426722 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
NELFE-203ENST00000426722 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
NELFE-203ENST00000426722 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
NELFE-203ENST00000426722 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
NELFE-203ENST00000426722 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
NELFE-203ENST00000426722 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
NELFE-203ENST00000426722 MAP2P11137 1827 aaKnown RBP17.87■□□□□ 0.45
NELFE-203ENST00000426722 KCNQ4P56696 695 aa17.87■□□□□ 0.45
NELFE-203ENST00000426722 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
NELFE-203ENST00000426722 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
NELFE-203ENST00000426722 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
NELFE-203ENST00000426722 ITGB4P16144 1822 aa17.86■□□□□ 0.45
NELFE-203ENST00000426722 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
NELFE-203ENST00000426722 C5P01031 1676 aa17.85■□□□□ 0.45
NELFE-203ENST00000426722 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
NELFE-203ENST00000426722 GPR162Q16538 588 aa17.85■□□□□ 0.45
NELFE-203ENST00000426722 WASHC2AQ641Q2 1341 aa17.85■□□□□ 0.45
NELFE-203ENST00000426722 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
NELFE-203ENST00000426722 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
NELFE-203ENST00000426722 EMILIN1Q9Y6C2 1016 aa17.85■□□□□ 0.45
NELFE-203ENST00000426722 CYP27B1O15528 508 aa17.83■□□□□ 0.44
NELFE-203ENST00000426722 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.44
NELFE-203ENST00000426722 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
NELFE-203ENST00000426722 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.44
NELFE-203ENST00000426722 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
NELFE-203ENST00000426722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.442e-7■■□□□ 13.7
NELFE-203ENST00000426722 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
NELFE-203ENST00000426722 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
NELFE-203ENST00000426722 MSH5O43196 834 aa17.82■□□□□ 0.44
NELFE-203ENST00000426722 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
NELFE-203ENST00000426722 PLEKHG2Q9H7P9 1386 aa17.8■□□□□ 0.44
NELFE-203ENST00000426722 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
NELFE-203ENST00000426722 EYA1Q99502 592 aa17.79■□□□□ 0.44
NELFE-203ENST00000426722 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
NELFE-203ENST00000426722 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
NELFE-203ENST00000426722 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
NELFE-203ENST00000426722 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
NELFE-203ENST00000426722 PIGBQ92521 554 aa17.77■□□□□ 0.44
NELFE-203ENST00000426722 NLGN2Q8NFZ4 835 aa17.76■□□□□ 0.43
NELFE-203ENST00000426722 AK7Q96M32 723 aa17.76■□□□□ 0.43
NELFE-203ENST00000426722 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
NELFE-203ENST00000426722 UBR3Q6ZT12 1888 aa17.75■□□□□ 0.43
NELFE-203ENST00000426722 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
NELFE-203ENST00000426722 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
NELFE-203ENST00000426722 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
NELFE-203ENST00000426722 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
NELFE-203ENST00000426722 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
NELFE-203ENST00000426722 PHKG2P15735 406 aa17.73■□□□□ 0.43
NELFE-203ENST00000426722 SSFA2P28290 1259 aa17.73■□□□□ 0.43
NELFE-203ENST00000426722 SIK1P57059 783 aa17.73■□□□□ 0.43
NELFE-203ENST00000426722 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
NELFE-203ENST00000426722 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
NELFE-203ENST00000426722 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
NELFE-203ENST00000426722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
NELFE-203ENST00000426722 HSP90AB1P08238 724 aaKnown RBP17.7■□□□□ 0.42
NELFE-203ENST00000426722 C1QTNF8P60827 252 aa17.7■□□□□ 0.42
NELFE-203ENST00000426722 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
NELFE-203ENST00000426722 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
NELFE-203ENST00000426722 YBX3P16989 372 aaKnown RBP eCLIP17.69■□□□□ 0.427e-7■□□□□ 10.2
NELFE-203ENST00000426722 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
NELFE-203ENST00000426722 PANK3Q9H999 370 aa17.69■□□□□ 0.42
NELFE-203ENST00000426722 ZNF831Q5JPB2 1677 aa17.68■□□□□ 0.42
NELFE-203ENST00000426722 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
NELFE-203ENST00000426722 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
NELFE-203ENST00000426722 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
NELFE-203ENST00000426722 LINC00116Q8NCU8 138 aa17.68■□□□□ 0.42
NELFE-203ENST00000426722 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
NELFE-203ENST00000426722 UTRNP46939 3433 aa17.68■□□□□ 0.42
NELFE-203ENST00000426722 PHF14O94880 888 aa17.67■□□□□ 0.42
NELFE-203ENST00000426722 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms