RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
COPS6-204ENST00000426712 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
COPS6-204ENST00000426712 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
COPS6-204ENST00000426712 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
COPS6-204ENST00000426712 AMPHP49418 695 aa12.47□□□□□ -0.41
COPS6-204ENST00000426712 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
COPS6-204ENST00000426712 ITGB4P16144 1822 aa12.46□□□□□ -0.41
COPS6-204ENST00000426712 NSD2O96028 1365 aa12.46□□□□□ -0.41
COPS6-204ENST00000426712 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
COPS6-204ENST00000426712 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
COPS6-204ENST00000426712 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.42
COPS6-204ENST00000426712 KIF20BQ96Q89 1820 aa12.46□□□□□ -0.42
COPS6-204ENST00000426712 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
COPS6-204ENST00000426712 CGNL1Q0VF96 1302 aa12.45□□□□□ -0.42
COPS6-204ENST00000426712 PNPLA7Q6ZV29 1317 aa12.45□□□□□ -0.42
COPS6-204ENST00000426712 RTL1A6NKG5 1358 aa12.44□□□□□ -0.42
COPS6-204ENST00000426712 MEGF6O75095 1541 aa12.44□□□□□ -0.42
COPS6-204ENST00000426712 KCNQ4P56696 695 aa12.43□□□□□ -0.42
COPS6-204ENST00000426712 TMF1P82094 1093 aa12.43□□□□□ -0.42
COPS6-204ENST00000426712 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
COPS6-204ENST00000426712 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
COPS6-204ENST00000426712 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
COPS6-204ENST00000426712 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
COPS6-204ENST00000426712 INSRP06213 1382 aa12.42□□□□□ -0.42
COPS6-204ENST00000426712 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
COPS6-204ENST00000426712 C5P01031 1676 aa12.42□□□□□ -0.42
COPS6-204ENST00000426712 POLD1P28340 1107 aa12.41□□□□□ -0.42
COPS6-204ENST00000426712 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
COPS6-204ENST00000426712 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
COPS6-204ENST00000426712 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
COPS6-204ENST00000426712 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
COPS6-204ENST00000426712 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
COPS6-204ENST00000426712 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.43
COPS6-204ENST00000426712 GPR162Q16538 588 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 CDCA8Q53HL2 280 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 USP47Q96K76 1375 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 ANKRD26Q9UPS8 1709 aa12.39□□□□□ -0.43
COPS6-204ENST00000426712 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
COPS6-204ENST00000426712 TATP17735 454 aaPredicted RBP12.38□□□□□ -0.43
COPS6-204ENST00000426712 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
COPS6-204ENST00000426712 FLT4P35916 1363 aa12.38□□□□□ -0.43
COPS6-204ENST00000426712 NCAPD2Q15021 1401 aa12.37□□□□□ -0.43
COPS6-204ENST00000426712 CYP27B1O15528 508 aa12.37□□□□□ -0.43
COPS6-204ENST00000426712 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
COPS6-204ENST00000426712 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
COPS6-204ENST00000426712 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
COPS6-204ENST00000426712 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
COPS6-204ENST00000426712 C1QTNF8P60827 252 aa12.36□□□□□ -0.43
COPS6-204ENST00000426712 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
COPS6-204ENST00000426712 C4BP0C0L5 1744 aa12.35□□□□□ -0.43
COPS6-204ENST00000426712 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
COPS6-204ENST00000426712 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
COPS6-204ENST00000426712 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
COPS6-204ENST00000426712 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
COPS6-204ENST00000426712 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
COPS6-204ENST00000426712 WASHC2AQ641Q2 1341 aa12.34□□□□□ -0.43
COPS6-204ENST00000426712 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
COPS6-204ENST00000426712 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.447e-7■■□□□ 14.4
COPS6-204ENST00000426712 PIGBQ92521 554 aa12.33□□□□□ -0.44
COPS6-204ENST00000426712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.44
COPS6-204ENST00000426712 CD2APQ9Y5K6 639 aa12.33□□□□□ -0.44
COPS6-204ENST00000426712 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
COPS6-204ENST00000426712 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
COPS6-204ENST00000426712 MSH5O43196 834 aa12.32□□□□□ -0.44
COPS6-204ENST00000426712 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
COPS6-204ENST00000426712 EYA1Q99502 592 aa12.32□□□□□ -0.44
COPS6-204ENST00000426712 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
COPS6-204ENST00000426712 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
COPS6-204ENST00000426712 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
COPS6-204ENST00000426712 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
COPS6-204ENST00000426712 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
COPS6-204ENST00000426712 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
COPS6-204ENST00000426712 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
COPS6-204ENST00000426712 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
COPS6-204ENST00000426712 LOC102724428A0A0B4J2F2 783 aa12.28□□□□□ -0.44
COPS6-204ENST00000426712 SIK1P57059 783 aa12.28□□□□□ -0.44
COPS6-204ENST00000426712 MYH14Q7Z406 1995 aaKnown RBP12.28□□□□□ -0.44
COPS6-204ENST00000426712 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
COPS6-204ENST00000426712 CEP350Q5VT06 3117 aa12.27□□□□□ -0.44
COPS6-204ENST00000426712 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
COPS6-204ENST00000426712 GIGYF1O75420 1035 aaPredicted RBP12.27□□□□□ -0.45
COPS6-204ENST00000426712 PHKG2P15735 406 aa12.27□□□□□ -0.45
COPS6-204ENST00000426712 SSFA2P28290 1259 aa12.27□□□□□ -0.45
COPS6-204ENST00000426712 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
COPS6-204ENST00000426712 AK7Q96M32 723 aa12.27□□□□□ -0.45
COPS6-204ENST00000426712 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
COPS6-204ENST00000426712 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
COPS6-204ENST00000426712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
COPS6-204ENST00000426712 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
COPS6-204ENST00000426712 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
COPS6-204ENST00000426712 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
COPS6-204ENST00000426712 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
COPS6-204ENST00000426712 ITPK1Q13572 414 aa12.25□□□□□ -0.45
COPS6-204ENST00000426712 EIF4A2Q14240 407 aaKnown RBP12.25□□□□□ -0.45
COPS6-204ENST00000426712 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
COPS6-204ENST00000426712 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
COPS6-204ENST00000426712 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
COPS6-204ENST00000426712 KIAA1551Q9HCM1 1747 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms