RNA–Protein interactions for RNA: ENST00000426572.5

ZKSCAN1-202, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-202ENST00000426572 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
ZKSCAN1-202ENST00000426572 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
ZKSCAN1-202ENST00000426572 CPDO75976 1380 aa16.9■□□□□ 0.3
ZKSCAN1-202ENST00000426572 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
ZKSCAN1-202ENST00000426572 COL18A1P39060 1754 aa16.9■□□□□ 0.3
ZKSCAN1-202ENST00000426572 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
ZKSCAN1-202ENST00000426572 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
ZKSCAN1-202ENST00000426572 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
ZKSCAN1-202ENST00000426572 GNAI1P63096 354 aa16.89■□□□□ 0.29
ZKSCAN1-202ENST00000426572 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
ZKSCAN1-202ENST00000426572 MCM10Q7L590 875 aa16.89■□□□□ 0.29
ZKSCAN1-202ENST00000426572 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
ZKSCAN1-202ENST00000426572 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
ZKSCAN1-202ENST00000426572 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
ZKSCAN1-202ENST00000426572 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
ZKSCAN1-202ENST00000426572 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
ZKSCAN1-202ENST00000426572 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
ZKSCAN1-202ENST00000426572 AAMPQ13685 434 aa16.86■□□□□ 0.29
ZKSCAN1-202ENST00000426572 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
ZKSCAN1-202ENST00000426572 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
ZKSCAN1-202ENST00000426572 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
ZKSCAN1-202ENST00000426572 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
ZKSCAN1-202ENST00000426572 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
ZKSCAN1-202ENST00000426572 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
ZKSCAN1-202ENST00000426572 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
ZKSCAN1-202ENST00000426572 CRB1P82279 1406 aa16.84■□□□□ 0.29
ZKSCAN1-202ENST00000426572 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
ZKSCAN1-202ENST00000426572 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
ZKSCAN1-202ENST00000426572 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
ZKSCAN1-202ENST00000426572 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
ZKSCAN1-202ENST00000426572 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
ZKSCAN1-202ENST00000426572 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
ZKSCAN1-202ENST00000426572 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
ZKSCAN1-202ENST00000426572 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
ZKSCAN1-202ENST00000426572 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
ZKSCAN1-202ENST00000426572 CHL1O00533 1208 aa16.8■□□□□ 0.28
ZKSCAN1-202ENST00000426572 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
ZKSCAN1-202ENST00000426572 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
ZKSCAN1-202ENST00000426572 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
ZKSCAN1-202ENST00000426572 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
ZKSCAN1-202ENST00000426572 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
ZKSCAN1-202ENST00000426572 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
ZKSCAN1-202ENST00000426572 COL5A2P05997 1499 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
ZKSCAN1-202ENST00000426572 VAMP4O75379 141 aa16.77■□□□□ 0.28
ZKSCAN1-202ENST00000426572 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
ZKSCAN1-202ENST00000426572 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
ZKSCAN1-202ENST00000426572 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.28
ZKSCAN1-202ENST00000426572 MEGF6O75095 1541 aa16.77■□□□□ 0.28
ZKSCAN1-202ENST00000426572 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 PHLPP1O60346 1717 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TOM1O60784 492 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 FAM161AQ3B820 660 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.27
ZKSCAN1-202ENST00000426572 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
ZKSCAN1-202ENST00000426572 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
ZKSCAN1-202ENST00000426572 DDRGK1Q96HY6 314 aa16.76■□□□□ 0.27
ZKSCAN1-202ENST00000426572 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
ZKSCAN1-202ENST00000426572 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
ZKSCAN1-202ENST00000426572 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
ZKSCAN1-202ENST00000426572 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN1-202ENST00000426572 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
ZKSCAN1-202ENST00000426572 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
ZKSCAN1-202ENST00000426572 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TATP17735 454 aaPredicted RBP16.74■□□□□ 0.27
ZKSCAN1-202ENST00000426572 PIP4K2BP78356 416 aa16.74■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
ZKSCAN1-202ENST00000426572 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
ZKSCAN1-202ENST00000426572 C8orf34Q49A92 452 aa16.74■□□□□ 0.27
ZKSCAN1-202ENST00000426572 RLBP1P12271 317 aa16.73■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
ZKSCAN1-202ENST00000426572 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
ZKSCAN1-202ENST00000426572 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
ZKSCAN1-202ENST00000426572 BRPF1P55201 1214 aaPredicted RBP16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 TRIM27P14373 513 aa16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
ZKSCAN1-202ENST00000426572 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.27
ZKSCAN1-202ENST00000426572 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
ZKSCAN1-202ENST00000426572 STRN4Q9NRL3 753 aa16.71■□□□□ 0.27
ZKSCAN1-202ENST00000426572 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
ZKSCAN1-202ENST00000426572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.272e-9■■■■□ 24.5
ZKSCAN1-202ENST00000426572 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 MRPL50Q8N5N7 158 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 ADAMTS7Q9UKP4 1686 aa16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 COL14A1Q05707 1796 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 IGHDP01880 384 aa16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 TEFQ10587 303 aa16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms