RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
GACAT3-201ENST00000426539 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
GACAT3-201ENST00000426539 PAPPAQ13219 1627 aa14.08□□□□□ -0.15
GACAT3-201ENST00000426539 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
GACAT3-201ENST00000426539 MEGF6O75095 1541 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 ZNF827Q17R98 1081 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 CARD14Q9BXL6 1004 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
GACAT3-201ENST00000426539 BTAF1O14981 1849 aa14.06□□□□□ -0.16
GACAT3-201ENST00000426539 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
GACAT3-201ENST00000426539 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
GACAT3-201ENST00000426539 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
GACAT3-201ENST00000426539 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
GACAT3-201ENST00000426539 NSD2O96028 1365 aa14.05□□□□□ -0.16
GACAT3-201ENST00000426539 MYOM1P52179 1685 aa14.04□□□□□ -0.16
GACAT3-201ENST00000426539 HSP90AB2PQ58FF8 381 aa14.04□□□□□ -0.16
GACAT3-201ENST00000426539 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
GACAT3-201ENST00000426539 MTFR1LQ9H019 292 aa14.04□□□□□ -0.16
GACAT3-201ENST00000426539 KCNQ4P56696 695 aa14.03□□□□□ -0.16
GACAT3-201ENST00000426539 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
GACAT3-201ENST00000426539 RGPD2P0DJD1 1756 aa14.03□□□□□ -0.16
GACAT3-201ENST00000426539 SHANK3Q9BYB0 1731 aa14.02□□□□□ -0.16
GACAT3-201ENST00000426539 INSRP06213 1382 aa14.02□□□□□ -0.17
GACAT3-201ENST00000426539 YY1P25490 414 aa14.02□□□□□ -0.17
GACAT3-201ENST00000426539 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
GACAT3-201ENST00000426539 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
GACAT3-201ENST00000426539 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
GACAT3-201ENST00000426539 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
GACAT3-201ENST00000426539 SYTL4Q96C24 671 aaPredicted RBP14.01□□□□□ -0.17
GACAT3-201ENST00000426539 SYT17Q9BSW7 474 aa14.01□□□□□ -0.17
GACAT3-201ENST00000426539 FLT4P35916 1363 aa14□□□□□ -0.17
GACAT3-201ENST00000426539 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
GACAT3-201ENST00000426539 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
GACAT3-201ENST00000426539 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
GACAT3-201ENST00000426539 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
GACAT3-201ENST00000426539 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
GACAT3-201ENST00000426539 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
GACAT3-201ENST00000426539 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
GACAT3-201ENST00000426539 ARXQ96QS3 562 aa13.98□□□□□ -0.17
GACAT3-201ENST00000426539 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
GACAT3-201ENST00000426539 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
GACAT3-201ENST00000426539 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
GACAT3-201ENST00000426539 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
GACAT3-201ENST00000426539 CYP27B1O15528 508 aa13.96□□□□□ -0.17
GACAT3-201ENST00000426539 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
GACAT3-201ENST00000426539 NCAPD2Q15021 1401 aa13.96□□□□□ -0.18
GACAT3-201ENST00000426539 MAP3K5Q99683 1374 aa13.96□□□□□ -0.18
GACAT3-201ENST00000426539 KAT6BQ8WYB5 2073 aa13.95□□□□□ -0.18
GACAT3-201ENST00000426539 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
GACAT3-201ENST00000426539 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
GACAT3-201ENST00000426539 LY75O60449 1722 aa13.95□□□□□ -0.18
GACAT3-201ENST00000426539 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
GACAT3-201ENST00000426539 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
GACAT3-201ENST00000426539 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
GACAT3-201ENST00000426539 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
GACAT3-201ENST00000426539 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
GACAT3-201ENST00000426539 EYA1Q99502 592 aa13.93□□□□□ -0.18
GACAT3-201ENST00000426539 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
GACAT3-201ENST00000426539 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
GACAT3-201ENST00000426539 COL23A1Q86Y22 540 aaPredicted RBP13.92□□□□□ -0.18
GACAT3-201ENST00000426539 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
GACAT3-201ENST00000426539 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
GACAT3-201ENST00000426539 ANKRD26Q9UPS8 1709 aa13.91□□□□□ -0.18
GACAT3-201ENST00000426539 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
GACAT3-201ENST00000426539 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
GACAT3-201ENST00000426539 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
GACAT3-201ENST00000426539 POLR3GLQ9BT43 218 aa13.91□□□□□ -0.18
GACAT3-201ENST00000426539 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
GACAT3-201ENST00000426539 POLD1P28340 1107 aa13.9□□□□□ -0.18
GACAT3-201ENST00000426539 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
GACAT3-201ENST00000426539 AMIGO3Q86WK7 504 aa13.89□□□□□ -0.19
GACAT3-201ENST00000426539 PIGBQ92521 554 aa13.89□□□□□ -0.19
GACAT3-201ENST00000426539 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
GACAT3-201ENST00000426539 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
GACAT3-201ENST00000426539 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
GACAT3-201ENST00000426539 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
GACAT3-201ENST00000426539 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
GACAT3-201ENST00000426539 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
GACAT3-201ENST00000426539 PANK3Q9H999 370 aa13.88□□□□□ -0.19
GACAT3-201ENST00000426539 CAPN15O75808 1086 aa13.87□□□□□ -0.19
GACAT3-201ENST00000426539 MSL1Q68DK7 614 aa13.87□□□□□ -0.19
GACAT3-201ENST00000426539 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
GACAT3-201ENST00000426539 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
GACAT3-201ENST00000426539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
GACAT3-201ENST00000426539 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
GACAT3-201ENST00000426539 PHKG2P15735 406 aa13.86□□□□□ -0.19
GACAT3-201ENST00000426539 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
GACAT3-201ENST00000426539 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
GACAT3-201ENST00000426539 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
GACAT3-201ENST00000426539 GPR162Q16538 588 aa13.85□□□□□ -0.19
GACAT3-201ENST00000426539 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
GACAT3-201ENST00000426539 C5P01031 1676 aa13.85□□□□□ -0.19
GACAT3-201ENST00000426539 ASAP1Q9ULH1 1129 aa13.84□□□□□ -0.19
GACAT3-201ENST00000426539 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
GACAT3-201ENST00000426539 ITGB4P16144 1822 aa13.83□□□□□ -0.2
GACAT3-201ENST00000426539 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
GACAT3-201ENST00000426539 SIK1P57059 783 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms