RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 FAM208AQ9UK61 1670 aaKnown RBP19.6■□□□□ 0.73
GINS3-203ENST00000426538 CAMTA1Q9Y6Y1 1673 aa19.6■□□□□ 0.73
GINS3-203ENST00000426538 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
GINS3-203ENST00000426538 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
GINS3-203ENST00000426538 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
GINS3-203ENST00000426538 STRN4Q9NRL3 753 aa19.58■□□□□ 0.72
GINS3-203ENST00000426538 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
GINS3-203ENST00000426538 BTG4Q9NY30 223 aa19.57■□□□□ 0.72
GINS3-203ENST00000426538 COL5A2P05997 1499 aaPredicted RBP19.57■□□□□ 0.72
GINS3-203ENST00000426538 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
GINS3-203ENST00000426538 CT47B1P0C2W7 299 aaPredicted RBP19.56■□□□□ 0.72
GINS3-203ENST00000426538 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
GINS3-203ENST00000426538 RRP1P56182 461 aaKnown RBP19.56■□□□□ 0.72
GINS3-203ENST00000426538 IRX6P78412 446 aaPredicted RBP19.56■□□□□ 0.72
GINS3-203ENST00000426538 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
GINS3-203ENST00000426538 AKAP4Q5JQC9 854 aa19.56■□□□□ 0.72
GINS3-203ENST00000426538 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
GINS3-203ENST00000426538 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
GINS3-203ENST00000426538 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
GINS3-203ENST00000426538 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
GINS3-203ENST00000426538 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
GINS3-203ENST00000426538 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
GINS3-203ENST00000426538 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
GINS3-203ENST00000426538 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
GINS3-203ENST00000426538 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
GINS3-203ENST00000426538 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
GINS3-203ENST00000426538 MBIPQ9NS73 344 aa19.54■□□□□ 0.72
GINS3-203ENST00000426538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
GINS3-203ENST00000426538 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
GINS3-203ENST00000426538 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
GINS3-203ENST00000426538 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
GINS3-203ENST00000426538 JCADQ9P266 1359 aa19.52■□□□□ 0.72
GINS3-203ENST00000426538 CHL1O00533 1208 aa19.51■□□□□ 0.71
GINS3-203ENST00000426538 ERICH6BQ5W0A0 696 aa19.51■□□□□ 0.71
GINS3-203ENST00000426538 CRB1P82279 1406 aa19.5■□□□□ 0.71
GINS3-203ENST00000426538 RARSP54136 660 aaKnown RBP19.5■□□□□ 0.71
GINS3-203ENST00000426538 BCAR3O75815 825 aa19.49■□□□□ 0.71
GINS3-203ENST00000426538 MEGF6O75095 1541 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 PLIN1O60240 522 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 IL2RBP14784 551 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
GINS3-203ENST00000426538 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
GINS3-203ENST00000426538 TEFQ10587 303 aa19.47■□□□□ 0.71
GINS3-203ENST00000426538 ZNF428Q96B54 188 aa19.47■□□□□ 0.71
GINS3-203ENST00000426538 BABAM1Q9NWV8 329 aa19.47■□□□□ 0.71
GINS3-203ENST00000426538 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
GINS3-203ENST00000426538 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
GINS3-203ENST00000426538 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
GINS3-203ENST00000426538 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
GINS3-203ENST00000426538 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
GINS3-203ENST00000426538 ZCRB1Q8TBF4 217 aaKnown RBP19.45■□□□□ 0.7
GINS3-203ENST00000426538 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
GINS3-203ENST00000426538 PHKG2P15735 406 aa19.45■□□□□ 0.7
GINS3-203ENST00000426538 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
GINS3-203ENST00000426538 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
GINS3-203ENST00000426538 VAMP4O75379 141 aa19.44■□□□□ 0.7
GINS3-203ENST00000426538 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
GINS3-203ENST00000426538 HSPA1LP34931 641 aa19.44■□□□□ 0.7
GINS3-203ENST00000426538 ALDH1L2Q3SY69 923 aa19.43■□□□□ 0.7
GINS3-203ENST00000426538 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
GINS3-203ENST00000426538 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
GINS3-203ENST00000426538 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
GINS3-203ENST00000426538 SMC4Q9NTJ3 1288 aa19.43■□□□□ 0.7
GINS3-203ENST00000426538 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
GINS3-203ENST00000426538 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
GINS3-203ENST00000426538 SSH1Q8WYL5 1049 aa19.42■□□□□ 0.7
GINS3-203ENST00000426538 NGLY1Q96IV0 654 aa19.42■□□□□ 0.7
GINS3-203ENST00000426538 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
GINS3-203ENST00000426538 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
GINS3-203ENST00000426538 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
GINS3-203ENST00000426538 CYP27B1O15528 508 aa19.41■□□□□ 0.7
GINS3-203ENST00000426538 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
GINS3-203ENST00000426538 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
GINS3-203ENST00000426538 BTBD11A6QL63 1104 aa19.4■□□□□ 0.7
GINS3-203ENST00000426538 C8orf37Q96NL8 207 aa19.4■□□□□ 0.7
GINS3-203ENST00000426538 PKD1L3Q7Z443 1732 aa19.39■□□□□ 0.7
GINS3-203ENST00000426538 CCDC9Q9Y3X0 531 aaKnown RBP19.39■□□□□ 0.69
GINS3-203ENST00000426538 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
GINS3-203ENST00000426538 PPP4R2Q9NY27 417 aa19.38■□□□□ 0.69
GINS3-203ENST00000426538 THRAP3Q9Y2W1 955 aaKnown RBP19.38■□□□□ 0.69
GINS3-203ENST00000426538 SLIT2O94813 1529 aa19.37■□□□□ 0.69
GINS3-203ENST00000426538 PDE3AQ14432 1141 aa19.37■□□□□ 0.69
GINS3-203ENST00000426538 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
GINS3-203ENST00000426538 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
GINS3-203ENST00000426538 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
GINS3-203ENST00000426538 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
GINS3-203ENST00000426538 NWD2Q9ULI1 1742 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 SPATA31A1Q5TZJ5 1347 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 KIF16BQ96L93 1317 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 MS4A1P11836 297 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 MEX3CQ5U5Q3 659 aaKnown RBP19.36■□□□□ 0.69
GINS3-203ENST00000426538 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 EXOC6Q8TAG9 804 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 CDCA7Q9BWT1 371 aaPredicted RBP19.36■□□□□ 0.69
GINS3-203ENST00000426538 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
GINS3-203ENST00000426538 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms