RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 GAS2L2Q8NHY3 880 aa19.74■□□□□ 0.75
PKP4-205ENST00000426248 LRRC59Q96AG4 307 aaKnown RBP19.74■□□□□ 0.75
PKP4-205ENST00000426248 SLC4A10Q6U841 1118 aa19.73■□□□□ 0.75
PKP4-205ENST00000426248 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
PKP4-205ENST00000426248 IL13P35225 146 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 NASPP49321 788 aaPredicted RBP19.72■□□□□ 0.75
PKP4-205ENST00000426248 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
PKP4-205ENST00000426248 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 C3P01024 1663 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 ATP7BP35670 1465 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 ZKSCAN2Q63HK3 967 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 TOM1L2Q6ZVM7 507 aa19.72■□□□□ 0.75
PKP4-205ENST00000426248 EYA1Q99502 592 aa19.71■□□□□ 0.75
PKP4-205ENST00000426248 USP6P35125 1406 aa19.71■□□□□ 0.75
PKP4-205ENST00000426248 GBP4Q96PP9 640 aa19.71■□□□□ 0.75
PKP4-205ENST00000426248 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
PKP4-205ENST00000426248 TAOK2Q9UL54 1235 aa19.7■□□□□ 0.74
PKP4-205ENST00000426248 HOXC9P31274 260 aa19.69■□□□□ 0.74
PKP4-205ENST00000426248 CHMP4BQ9H444 224 aaKnown RBP19.69■□□□□ 0.74
PKP4-205ENST00000426248 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
PKP4-205ENST00000426248 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
PKP4-205ENST00000426248 FLT4P35916 1363 aa19.68■□□□□ 0.74
PKP4-205ENST00000426248 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
PKP4-205ENST00000426248 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
PKP4-205ENST00000426248 ZNF330Q9Y3S2 320 aaPredicted RBP19.68■□□□□ 0.74
PKP4-205ENST00000426248 POLR1AO95602 1720 aaPredicted RBP19.68■□□□□ 0.74
PKP4-205ENST00000426248 ADAMTS2O95450 1211 aa19.67■□□□□ 0.74
PKP4-205ENST00000426248 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
PKP4-205ENST00000426248 DLC1Q96QB1 1528 aa19.66■□□□□ 0.74
PKP4-205ENST00000426248 ARHGEF28Q8N1W1 1705 aaKnown RBP19.66■□□□□ 0.74
PKP4-205ENST00000426248 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
PKP4-205ENST00000426248 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
PKP4-205ENST00000426248 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
PKP4-205ENST00000426248 IFT172Q9UG01 1749 aa19.65■□□□□ 0.74
PKP4-205ENST00000426248 TECPR2O15040 1411 aa19.65■□□□□ 0.74
PKP4-205ENST00000426248 DDX54Q8TDD1 881 aaKnown RBP19.65■□□□□ 0.74
PKP4-205ENST00000426248 PRDM4Q9UKN5 801 aa19.65■□□□□ 0.74
PKP4-205ENST00000426248 UBR1Q8IWV7 1749 aa19.65■□□□□ 0.74
PKP4-205ENST00000426248 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.74
PKP4-205ENST00000426248 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
PKP4-205ENST00000426248 APBB1O00213 710 aa19.64■□□□□ 0.73
PKP4-205ENST00000426248 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
PKP4-205ENST00000426248 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.73
PKP4-205ENST00000426248 CBX1P83916 185 aa19.64■□□□□ 0.73
PKP4-205ENST00000426248 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
PKP4-205ENST00000426248 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
PKP4-205ENST00000426248 MTHFSDQ2M296 383 aaKnown RBP19.63■□□□□ 0.73
PKP4-205ENST00000426248 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
PKP4-205ENST00000426248 RARSP54136 660 aaKnown RBP19.63■□□□□ 0.73
PKP4-205ENST00000426248 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
PKP4-205ENST00000426248 SYTL4Q96C24 671 aaPredicted RBP19.63■□□□□ 0.73
PKP4-205ENST00000426248 NOB1Q9ULX3 412 aaKnown RBP19.63■□□□□ 0.73
PKP4-205ENST00000426248 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
PKP4-205ENST00000426248 IP6K1Q92551 441 aa19.62■□□□□ 0.73
PKP4-205ENST00000426248 SLIT1O75093 1534 aa19.62■□□□□ 0.73
PKP4-205ENST00000426248 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
PKP4-205ENST00000426248 IGHDP01880 384 aa19.61■□□□□ 0.73
PKP4-205ENST00000426248 TRIM35Q9UPQ4 493 aa19.61■□□□□ 0.73
PKP4-205ENST00000426248 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
PKP4-205ENST00000426248 VGLL3A8MV65 326 aa19.61■□□□□ 0.73
PKP4-205ENST00000426248 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
PKP4-205ENST00000426248 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
PKP4-205ENST00000426248 NAP1L2Q9ULW6 460 aaPredicted RBP19.61■□□□□ 0.73
PKP4-205ENST00000426248 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
PKP4-205ENST00000426248 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
PKP4-205ENST00000426248 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
PKP4-205ENST00000426248 MBIPQ9NS73 344 aa19.6■□□□□ 0.73
PKP4-205ENST00000426248 UBAP1LF5GYI3 381 aa19.59■□□□□ 0.73
PKP4-205ENST00000426248 OFD1O75665 1012 aa19.58■□□□□ 0.73
PKP4-205ENST00000426248 NBPF6Q5VWK0 638 aa19.58■□□□□ 0.73
PKP4-205ENST00000426248 NBPF4Q96M43 638 aa19.58■□□□□ 0.73
PKP4-205ENST00000426248 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.73
PKP4-205ENST00000426248 KRT24Q2M2I5 525 aa19.58■□□□□ 0.73
PKP4-205ENST00000426248 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
PKP4-205ENST00000426248 MPNDQ8N594 471 aa19.58■□□□□ 0.72
PKP4-205ENST00000426248 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.72
PKP4-205ENST00000426248 SMAP1Q8IYB5 467 aaPredicted RBP19.57■□□□□ 0.72
PKP4-205ENST00000426248 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 MTERF4Q7Z6M4 381 aaKnown RBP19.57■□□□□ 0.72
PKP4-205ENST00000426248 CPS1P31327 1500 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 PLEKHF1Q96S99 279 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
PKP4-205ENST00000426248 GAS2L3Q86XJ1 694 aa19.56■□□□□ 0.72
PKP4-205ENST00000426248 IGSF3O75054 1194 aa19.56■□□□□ 0.72
PKP4-205ENST00000426248 ZNF428Q96B54 188 aa19.56■□□□□ 0.72
PKP4-205ENST00000426248 AATKQ6ZMQ8 1374 aa19.56■□□□□ 0.72
PKP4-205ENST00000426248 RWDD1Q9H446 243 aaPredicted RBP19.55■□□□□ 0.72
PKP4-205ENST00000426248 TSPYL6Q8N831 410 aa19.55■□□□□ 0.72
PKP4-205ENST00000426248 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
PKP4-205ENST00000426248 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
PKP4-205ENST00000426248 ZNF771Q7L3S4 317 aaPredicted RBP19.54■□□□□ 0.72
PKP4-205ENST00000426248 TNNQ9UQP3 1299 aa19.54■□□□□ 0.72
PKP4-205ENST00000426248 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
PKP4-205ENST00000426248 BRINP3Q76B58 766 aa19.54■□□□□ 0.72
PKP4-205ENST00000426248 ANTXR1Q9H6X2 564 aa19.54■□□□□ 0.72
PKP4-205ENST00000426248 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
PKP4-205ENST00000426248 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms