RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 POLKQ9UBT6 870 aa23.94■■□□□ 1.42
SLC6A1-202ENST00000425938 DDX54Q8TDD1 881 aaKnown RBP23.93■■□□□ 1.42
SLC6A1-202ENST00000425938 MEGF6O75095 1541 aa23.93■■□□□ 1.42
SLC6A1-202ENST00000425938 NHSQ6T4R5 1651 aa23.92■■□□□ 1.42
SLC6A1-202ENST00000425938 KCNQ2O43526 872 aa23.92■■□□□ 1.42
SLC6A1-202ENST00000425938 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
SLC6A1-202ENST00000425938 ZCRB1Q8TBF4 217 aaKnown RBP23.91■■□□□ 1.42
SLC6A1-202ENST00000425938 TATP17735 454 aaPredicted RBP23.9■■□□□ 1.42
SLC6A1-202ENST00000425938 PROM2Q8N271 834 aa23.9■■□□□ 1.42
SLC6A1-202ENST00000425938 ACSBG1Q96GR2 724 aa23.9■■□□□ 1.42
SLC6A1-202ENST00000425938 SHANK3Q9BYB0 1731 aa23.88■■□□□ 1.41
SLC6A1-202ENST00000425938 TXNRD1Q16881 649 aa23.88■■□□□ 1.41
SLC6A1-202ENST00000425938 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
SLC6A1-202ENST00000425938 BTAF1O14981 1849 aa23.86■■□□□ 1.41
SLC6A1-202ENST00000425938 ANO8Q9HCE9 1232 aaPredicted RBP23.84■■□□□ 1.41
SLC6A1-202ENST00000425938 NCAPD2Q15021 1401 aa23.84■■□□□ 1.41
SLC6A1-202ENST00000425938 EYA1Q99502 592 aa23.83■■□□□ 1.41
SLC6A1-202ENST00000425938 PCDH11XQ9BZA7 1347 aa23.83■■□□□ 1.4
SLC6A1-202ENST00000425938 PCDH11YQ9BZA8 1340 aa23.83■■□□□ 1.4
SLC6A1-202ENST00000425938 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
SLC6A1-202ENST00000425938 EIF4A2Q14240 407 aaKnown RBP23.82■■□□□ 1.4
SLC6A1-202ENST00000425938 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
SLC6A1-202ENST00000425938 SYTL4Q96C24 671 aaPredicted RBP23.8■■□□□ 1.4
SLC6A1-202ENST00000425938 STK32BQ9NY57 414 aa23.8■■□□□ 1.4
SLC6A1-202ENST00000425938 PKD1L3Q7Z443 1732 aa23.79■■□□□ 1.4
SLC6A1-202ENST00000425938 SPON1Q9HCB6 807 aa23.79■■□□□ 1.4
SLC6A1-202ENST00000425938 PRIM1P49642 420 aaKnown RBP23.78■■□□□ 1.4
SLC6A1-202ENST00000425938 SPG7Q9UQ90 795 aa23.78■■□□□ 1.4
SLC6A1-202ENST00000425938 SLC15A2Q16348 729 aa23.77■■□□□ 1.4
SLC6A1-202ENST00000425938 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
SLC6A1-202ENST00000425938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.39
SLC6A1-202ENST00000425938 IGSF1Q8N6C5 1336 aa23.75■■□□□ 1.39
SLC6A1-202ENST00000425938 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
SLC6A1-202ENST00000425938 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
SLC6A1-202ENST00000425938 CYP27B1O15528 508 aa23.73■■□□□ 1.39
SLC6A1-202ENST00000425938 SLC27A3Q5K4L6 730 aa23.73■■□□□ 1.39
SLC6A1-202ENST00000425938 PDGFDQ9GZP0 370 aaPredicted RBP23.72■■□□□ 1.39
SLC6A1-202ENST00000425938 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
SLC6A1-202ENST00000425938 PLEKHG2Q9H7P9 1386 aa23.72■■□□□ 1.39
SLC6A1-202ENST00000425938 PAPPAQ13219 1627 aa23.71■■□□□ 1.39
SLC6A1-202ENST00000425938 LRRC4BQ9NT99 713 aa23.71■■□□□ 1.39
SLC6A1-202ENST00000425938 MTHFSP49914 203 aa23.7■■□□□ 1.38
SLC6A1-202ENST00000425938 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
SLC6A1-202ENST00000425938 ITGB4P16144 1822 aa23.68■■□□□ 1.38
SLC6A1-202ENST00000425938 ZBTB7AO95365 584 aa23.68■■□□□ 1.38
SLC6A1-202ENST00000425938 IFNL2Q8IZJ0 200 aa23.68■■□□□ 1.38
SLC6A1-202ENST00000425938 LY75O60449 1722 aa23.67■■□□□ 1.38
SLC6A1-202ENST00000425938 IL13P35225 146 aa23.67■■□□□ 1.38
SLC6A1-202ENST00000425938 NKX1-1Q15270 411 aaPredicted RBP23.67■■□□□ 1.38
SLC6A1-202ENST00000425938 TOGARAM1Q9Y4F4 1720 aa23.67■■□□□ 1.38
SLC6A1-202ENST00000425938 MPRIPQ6WCQ1 1025 aa23.66■■□□□ 1.38
SLC6A1-202ENST00000425938 PHKG2P15735 406 aa23.65■■□□□ 1.38
SLC6A1-202ENST00000425938 ZNF827Q17R98 1081 aa23.65■■□□□ 1.38
SLC6A1-202ENST00000425938 PLEKHO1Q53GL0 409 aaPredicted RBP23.65■■□□□ 1.38
SLC6A1-202ENST00000425938 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
SLC6A1-202ENST00000425938 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.37
SLC6A1-202ENST00000425938 AEBP1Q8IUX7 1158 aa23.64■■□□□ 1.37
SLC6A1-202ENST00000425938 AKT1S1Q96B36 256 aa23.64■■□□□ 1.37
SLC6A1-202ENST00000425938 MTFR1LQ9H019 292 aa23.64■■□□□ 1.37
SLC6A1-202ENST00000425938 ATF5Q9Y2D1 282 aaPredicted RBP23.64■■□□□ 1.37
SLC6A1-202ENST00000425938 PTGER2P43116 358 aa23.62■■□□□ 1.37
SLC6A1-202ENST00000425938 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
SLC6A1-202ENST00000425938 KDRP35968 1356 aa23.62■■□□□ 1.37
SLC6A1-202ENST00000425938 DIAPH1O60610 1272 aaKnown RBP23.61■■□□□ 1.37
SLC6A1-202ENST00000425938 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
SLC6A1-202ENST00000425938 KCNQ4P56696 695 aa23.6■■□□□ 1.37
SLC6A1-202ENST00000425938 ZNF530Q6P9A1 599 aaPredicted RBP23.6■■□□□ 1.37
SLC6A1-202ENST00000425938 SMARCC1Q92922 1105 aaPredicted RBP23.6■■□□□ 1.37
SLC6A1-202ENST00000425938 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
SLC6A1-202ENST00000425938 HMGB2P26583 209 aaKnown RBP23.59■■□□□ 1.37
SLC6A1-202ENST00000425938 PALLDQ8WX93 1383 aa23.59■■□□□ 1.37
SLC6A1-202ENST00000425938 QSER1Q2KHR3 1735 aa23.59■■□□□ 1.37
SLC6A1-202ENST00000425938 C1orf141Q5JVX7 400 aa23.58■■□□□ 1.37
SLC6A1-202ENST00000425938 PIGBQ92521 554 aa23.58■■□□□ 1.37
SLC6A1-202ENST00000425938 TFCP2L1Q9NZI6 479 aa23.58■■□□□ 1.37
SLC6A1-202ENST00000425938 SLC16A10Q8TF71 515 aa23.57■■□□□ 1.36
SLC6A1-202ENST00000425938 DCAF5Q96JK2 942 aa23.56■■□□□ 1.36
SLC6A1-202ENST00000425938 SGIP1Q9BQI5 828 aa23.56■■□□□ 1.36
SLC6A1-202ENST00000425938 HMOX1P09601 288 aa23.55■■□□□ 1.36
SLC6A1-202ENST00000425938 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
SLC6A1-202ENST00000425938 PNPLA7Q6ZV29 1317 aa23.55■■□□□ 1.36
SLC6A1-202ENST00000425938 ERVV-2B6SEH9 535 aa23.54■■□□□ 1.36
SLC6A1-202ENST00000425938 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
SLC6A1-202ENST00000425938 C5P01031 1676 aa23.54■■□□□ 1.36
SLC6A1-202ENST00000425938 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
SLC6A1-202ENST00000425938 TAF1LQ8IZX4 1826 aa23.53■■□□□ 1.36
SLC6A1-202ENST00000425938 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
SLC6A1-202ENST00000425938 U2SURPO15042 1029 aaKnown RBP23.52■■□□□ 1.36
SLC6A1-202ENST00000425938 ARXQ96QS3 562 aa23.51■■□□□ 1.35
SLC6A1-202ENST00000425938 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
SLC6A1-202ENST00000425938 FHDC1Q9C0D6 1143 aaPredicted RBP23.5■■□□□ 1.35
SLC6A1-202ENST00000425938 KDM6AO15550 1401 aaPredicted RBP23.5■■□□□ 1.35
SLC6A1-202ENST00000425938 CABP4P57796 275 aa23.49■■□□□ 1.35
SLC6A1-202ENST00000425938 AKAP4Q5JQC9 854 aa23.49■■□□□ 1.35
SLC6A1-202ENST00000425938 ASAP1Q9ULH1 1129 aa23.49■■□□□ 1.35
SLC6A1-202ENST00000425938 SCN11AQ9UI33 1791 aa23.48■■□□□ 1.35
SLC6A1-202ENST00000425938 LOC102724428A0A0B4J2F2 783 aa23.48■■□□□ 1.35
SLC6A1-202ENST00000425938 SIK1P57059 783 aa23.48■■□□□ 1.35
SLC6A1-202ENST00000425938 SYT17Q9BSW7 474 aa23.48■■□□□ 1.35
SLC6A1-202ENST00000425938 ATG3Q9NT62 314 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms