RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 CPDO75976 1380 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 CAMTA1Q9Y6Y1 1673 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 MS4A1P11836 297 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 AAMPQ13685 434 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 ANKRD24Q8TF21 1146 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
CDK3-201ENST00000425876 SSH1Q8WYL5 1049 aa18.54■□□□□ 0.56
CDK3-201ENST00000425876 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
CDK3-201ENST00000425876 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
CDK3-201ENST00000425876 MCM10Q7L590 875 aa18.53■□□□□ 0.56
CDK3-201ENST00000425876 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
CDK3-201ENST00000425876 VAMP4O75379 141 aa18.52■□□□□ 0.56
CDK3-201ENST00000425876 HAP1P54257 671 aaPredicted RBP18.52■□□□□ 0.56
CDK3-201ENST00000425876 ZC3H6P61129 1189 aaKnown RBP18.52■□□□□ 0.56
CDK3-201ENST00000425876 ZKSCAN2Q63HK3 967 aa18.52■□□□□ 0.56
CDK3-201ENST00000425876 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
CDK3-201ENST00000425876 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
CDK3-201ENST00000425876 ERBB3P21860 1342 aa18.52■□□□□ 0.55
CDK3-201ENST00000425876 KIF16BQ96L93 1317 aa18.52■□□□□ 0.55
CDK3-201ENST00000425876 USHBP1Q8N6Y0 703 aa18.51■□□□□ 0.55
CDK3-201ENST00000425876 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
CDK3-201ENST00000425876 KIAA0232Q92628 1395 aa18.51■□□□□ 0.55
CDK3-201ENST00000425876 COL18A1P39060 1754 aa18.51■□□□□ 0.55
CDK3-201ENST00000425876 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
CDK3-201ENST00000425876 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
CDK3-201ENST00000425876 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
CDK3-201ENST00000425876 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
CDK3-201ENST00000425876 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
CDK3-201ENST00000425876 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
CDK3-201ENST00000425876 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
CDK3-201ENST00000425876 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
CDK3-201ENST00000425876 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
CDK3-201ENST00000425876 RGPD2P0DJD1 1756 aa18.49■□□□□ 0.55
CDK3-201ENST00000425876 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
CDK3-201ENST00000425876 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
CDK3-201ENST00000425876 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
CDK3-201ENST00000425876 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
CDK3-201ENST00000425876 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
CDK3-201ENST00000425876 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
CDK3-201ENST00000425876 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
CDK3-201ENST00000425876 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
CDK3-201ENST00000425876 ARHGAP45Q92619 1136 aa18.47■□□□□ 0.55
CDK3-201ENST00000425876 FAM208AQ9UK61 1670 aaKnown RBP18.46■□□□□ 0.55
CDK3-201ENST00000425876 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
CDK3-201ENST00000425876 RLBP1P12271 317 aa18.46■□□□□ 0.55
CDK3-201ENST00000425876 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
CDK3-201ENST00000425876 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
CDK3-201ENST00000425876 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
CDK3-201ENST00000425876 TRIM27P14373 513 aa18.45■□□□□ 0.54
CDK3-201ENST00000425876 AKAP4Q5JQC9 854 aa18.45■□□□□ 0.54
CDK3-201ENST00000425876 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
CDK3-201ENST00000425876 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
CDK3-201ENST00000425876 FTSJ3Q8IY81 847 aaKnown RBP18.44■□□□□ 0.54
CDK3-201ENST00000425876 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
CDK3-201ENST00000425876 TSPYL4Q9UJ04 414 aa18.44■□□□□ 0.54
CDK3-201ENST00000425876 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
CDK3-201ENST00000425876 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
CDK3-201ENST00000425876 MVPQ14764 893 aaKnown RBP18.43■□□□□ 0.54
CDK3-201ENST00000425876 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
CDK3-201ENST00000425876 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
CDK3-201ENST00000425876 JCADQ9P266 1359 aa18.43■□□□□ 0.54
CDK3-201ENST00000425876 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
CDK3-201ENST00000425876 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
CDK3-201ENST00000425876 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
CDK3-201ENST00000425876 TSHZ2Q9NRE2 1034 aa18.42■□□□□ 0.54
CDK3-201ENST00000425876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
CDK3-201ENST00000425876 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
CDK3-201ENST00000425876 NLRP2Q9NX02 1062 aa18.41■□□□□ 0.54
CDK3-201ENST00000425876 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
CDK3-201ENST00000425876 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
CDK3-201ENST00000425876 ABCA3Q99758 1704 aa18.4■□□□□ 0.54
CDK3-201ENST00000425876 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
CDK3-201ENST00000425876 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
CDK3-201ENST00000425876 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
CDK3-201ENST00000425876 CSB-PGBD3P0DP91 1061 aa18.38■□□□□ 0.53
CDK3-201ENST00000425876 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
CDK3-201ENST00000425876 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
CDK3-201ENST00000425876 MIS18AQ9NYP9 233 aa18.38■□□□□ 0.53
CDK3-201ENST00000425876 LRP6O75581 1613 aa18.38■□□□□ 0.53
CDK3-201ENST00000425876 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
CDK3-201ENST00000425876 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
CDK3-201ENST00000425876 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
CDK3-201ENST00000425876 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
CDK3-201ENST00000425876 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
CDK3-201ENST00000425876 ABCC4O15439 1325 aa18.35■□□□□ 0.53
CDK3-201ENST00000425876 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
CDK3-201ENST00000425876 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
CDK3-201ENST00000425876 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
CDK3-201ENST00000425876 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
CDK3-201ENST00000425876 SOCS7O14512 581 aa18.34■□□□□ 0.53
CDK3-201ENST00000425876 TEFQ10587 303 aa18.34■□□□□ 0.53
CDK3-201ENST00000425876 COL5A2P05997 1499 aaPredicted RBP18.34■□□□□ 0.53
CDK3-201ENST00000425876 PTPRCP08575 1304 aa18.34■□□□□ 0.53
CDK3-201ENST00000425876 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
CDK3-201ENST00000425876 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
CDK3-201ENST00000425876 MEGF6O75095 1541 aa18.33■□□□□ 0.53
CDK3-201ENST00000425876 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.52
CDK3-201ENST00000425876 HOXB7P09629 217 aa18.33■□□□□ 0.52
CDK3-201ENST00000425876 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms