RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 NMRK2Q9NPI5 230 aa13.96□□□□□ -0.17
SMIM27-201ENST00000425533 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
SMIM27-201ENST00000425533 NSD2O96028 1365 aa13.96□□□□□ -0.18
SMIM27-201ENST00000425533 USP54Q70EL1 1684 aa13.95□□□□□ -0.18
SMIM27-201ENST00000425533 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
SMIM27-201ENST00000425533 ANKRD36BQ8N2N9 1353 aa13.95□□□□□ -0.18
SMIM27-201ENST00000425533 LTN1O94822 1766 aa13.94□□□□□ -0.18
SMIM27-201ENST00000425533 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
SMIM27-201ENST00000425533 STAC3Q96MF2 364 aa13.94□□□□□ -0.18
SMIM27-201ENST00000425533 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
SMIM27-201ENST00000425533 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
SMIM27-201ENST00000425533 KIAA1210Q9ULL0 1709 aa13.93□□□□□ -0.18
SMIM27-201ENST00000425533 FSTL1Q12841 308 aa13.91□□□□□ -0.18
SMIM27-201ENST00000425533 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
SMIM27-201ENST00000425533 HSPA1AP0DMV8 641 aaKnown RBP13.9□□□□□ -0.18
SMIM27-201ENST00000425533 HSPA1BP0DMV9 641 aaKnown RBP13.9□□□□□ -0.18
SMIM27-201ENST00000425533 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
SMIM27-201ENST00000425533 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
SMIM27-201ENST00000425533 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.19
SMIM27-201ENST00000425533 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
SMIM27-201ENST00000425533 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
SMIM27-201ENST00000425533 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
SMIM27-201ENST00000425533 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
SMIM27-201ENST00000425533 USP47Q96K76 1375 aa13.88□□□□□ -0.19
SMIM27-201ENST00000425533 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
SMIM27-201ENST00000425533 N4BP2Q86UW6 1770 aaPredicted RBP13.87□□□□□ -0.19
SMIM27-201ENST00000425533 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
SMIM27-201ENST00000425533 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
SMIM27-201ENST00000425533 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
SMIM27-201ENST00000425533 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
SMIM27-201ENST00000425533 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
SMIM27-201ENST00000425533 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
SMIM27-201ENST00000425533 UBR3Q6ZT12 1888 aa13.86□□□□□ -0.19
SMIM27-201ENST00000425533 MON2Q7Z3U7 1717 aa13.85□□□□□ -0.19
SMIM27-201ENST00000425533 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
SMIM27-201ENST00000425533 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
SMIM27-201ENST00000425533 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
SMIM27-201ENST00000425533 KCPQ6ZWJ8 1503 aa13.85□□□□□ -0.19
SMIM27-201ENST00000425533 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
SMIM27-201ENST00000425533 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
SMIM27-201ENST00000425533 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.2
SMIM27-201ENST00000425533 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
SMIM27-201ENST00000425533 PHF14O94880 888 aa13.82□□□□□ -0.2
SMIM27-201ENST00000425533 SMIM5Q71RC9 77 aa13.82□□□□□ -0.2
SMIM27-201ENST00000425533 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
SMIM27-201ENST00000425533 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
SMIM27-201ENST00000425533 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
SMIM27-201ENST00000425533 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
SMIM27-201ENST00000425533 C9orf131Q5VYM1 1079 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 SMC1BQ8NDV3 1235 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
SMIM27-201ENST00000425533 AK7Q96M32 723 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 RRAGCQ9HB90 399 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 PALLDQ8WX93 1383 aa13.8□□□□□ -0.2
SMIM27-201ENST00000425533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
SMIM27-201ENST00000425533 HMGB2P26583 209 aaKnown RBP13.79□□□□□ -0.2
SMIM27-201ENST00000425533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMIM27-201ENST00000425533 MEGF6O75095 1541 aa13.79□□□□□ -0.2
SMIM27-201ENST00000425533 ARFGEF1Q9Y6D6 1849 aa13.78□□□□□ -0.2
SMIM27-201ENST00000425533 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
SMIM27-201ENST00000425533 TGFB2P61812 414 aa13.78□□□□□ -0.2
SMIM27-201ENST00000425533 NME9Q86XW9 330 aa13.78□□□□□ -0.2
SMIM27-201ENST00000425533 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
SMIM27-201ENST00000425533 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
SMIM27-201ENST00000425533 FCHSD2O94868 740 aa13.76□□□□□ -0.21
SMIM27-201ENST00000425533 SSFA2P28290 1259 aa13.76□□□□□ -0.21
SMIM27-201ENST00000425533 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
SMIM27-201ENST00000425533 IP6K1Q92551 441 aa13.76□□□□□ -0.21
SMIM27-201ENST00000425533 MMP10P09238 476 aa13.75□□□□□ -0.21
SMIM27-201ENST00000425533 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
SMIM27-201ENST00000425533 ITGB4P16144 1822 aa13.74□□□□□ -0.21
SMIM27-201ENST00000425533 SBF1O95248 1867 aa13.74□□□□□ -0.21
SMIM27-201ENST00000425533 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
SMIM27-201ENST00000425533 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
SMIM27-201ENST00000425533 DPEP1P16444 411 aa13.73□□□□□ -0.21
SMIM27-201ENST00000425533 RNF181Q9P0P0 153 aa13.73□□□□□ -0.21
SMIM27-201ENST00000425533 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
SMIM27-201ENST00000425533 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
SMIM27-201ENST00000425533 C4AP0C0L4 1744 aa13.71□□□□□ -0.21
SMIM27-201ENST00000425533 FOXN1O15353 648 aa13.71□□□□□ -0.21
SMIM27-201ENST00000425533 KCNA3P22001 575 aa13.71□□□□□ -0.21
SMIM27-201ENST00000425533 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
SMIM27-201ENST00000425533 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
SMIM27-201ENST00000425533 GNPATO15228 680 aa13.69□□□□□ -0.22
SMIM27-201ENST00000425533 SMARCC1Q92922 1105 aaPredicted RBP13.69□□□□□ -0.22
SMIM27-201ENST00000425533 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
SMIM27-201ENST00000425533 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
SMIM27-201ENST00000425533 HOXC9P31274 260 aa13.68□□□□□ -0.22
SMIM27-201ENST00000425533 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
SMIM27-201ENST00000425533 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
SMIM27-201ENST00000425533 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
SMIM27-201ENST00000425533 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
SMIM27-201ENST00000425533 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms