RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 TRAK2O60296 914 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
COL12A1-205ENST00000425443 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 AMPHP49418 695 aa16.16■□□□□ 0.18
COL12A1-205ENST00000425443 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
COL12A1-205ENST00000425443 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
COL12A1-205ENST00000425443 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
COL12A1-205ENST00000425443 UBR1Q8IWV7 1749 aa16.15■□□□□ 0.18
COL12A1-205ENST00000425443 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
COL12A1-205ENST00000425443 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
COL12A1-205ENST00000425443 THEMISQ8N1K5 641 aaPredicted RBP16.14■□□□□ 0.18
COL12A1-205ENST00000425443 GOLGA6L3A6NEY3 463 aa16.14■□□□□ 0.17
COL12A1-205ENST00000425443 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
COL12A1-205ENST00000425443 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
COL12A1-205ENST00000425443 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
COL12A1-205ENST00000425443 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
COL12A1-205ENST00000425443 USP6P35125 1406 aa16.13■□□□□ 0.17
COL12A1-205ENST00000425443 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
COL12A1-205ENST00000425443 NUTM2GQ5VZR2 741 aa16.12■□□□□ 0.17
COL12A1-205ENST00000425443 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
COL12A1-205ENST00000425443 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
COL12A1-205ENST00000425443 NLRP6P59044 892 aa16.12■□□□□ 0.17
COL12A1-205ENST00000425443 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 MIS18AQ9NYP9 233 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 C3P01024 1663 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
COL12A1-205ENST00000425443 ABCC4O15439 1325 aa16.1■□□□□ 0.17
COL12A1-205ENST00000425443 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
COL12A1-205ENST00000425443 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
COL12A1-205ENST00000425443 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
COL12A1-205ENST00000425443 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
COL12A1-205ENST00000425443 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.1■□□□□ 0.17
COL12A1-205ENST00000425443 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
COL12A1-205ENST00000425443 SNX21Q969T3 373 aa16.1■□□□□ 0.17
COL12A1-205ENST00000425443 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
COL12A1-205ENST00000425443 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
COL12A1-205ENST00000425443 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
COL12A1-205ENST00000425443 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
COL12A1-205ENST00000425443 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.17
COL12A1-205ENST00000425443 GAS2L3Q86XJ1 694 aa16.08■□□□□ 0.17
COL12A1-205ENST00000425443 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.16
COL12A1-205ENST00000425443 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.16
COL12A1-205ENST00000425443 CHL1O00533 1208 aa16.08■□□□□ 0.16
COL12A1-205ENST00000425443 FOXO3O43524 673 aa16.08■□□□□ 0.16
COL12A1-205ENST00000425443 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
COL12A1-205ENST00000425443 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
COL12A1-205ENST00000425443 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
COL12A1-205ENST00000425443 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
COL12A1-205ENST00000425443 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
COL12A1-205ENST00000425443 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
COL12A1-205ENST00000425443 FLT4P35916 1363 aa16.06■□□□□ 0.16
COL12A1-205ENST00000425443 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 AK9Q5TCS8 1911 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 SMARCA5O60264 1052 aaPredicted RBP16.05■□□□□ 0.16
COL12A1-205ENST00000425443 KCNA6P17658 529 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 ZBTB7CA1YPR0 619 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
COL12A1-205ENST00000425443 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
COL12A1-205ENST00000425443 EYA1Q99502 592 aa16.04■□□□□ 0.16
COL12A1-205ENST00000425443 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
COL12A1-205ENST00000425443 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 SSFA2P28290 1259 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
COL12A1-205ENST00000425443 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
COL12A1-205ENST00000425443 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 ERBB4Q15303 1308 aa16.03■□□□□ 0.16
COL12A1-205ENST00000425443 ARHGEF10O15013 1369 aa16.02■□□□□ 0.15
COL12A1-205ENST00000425443 K7ELQ4 463 aaPredicted RBP16.02■□□□□ 0.15
COL12A1-205ENST00000425443 PTPRCP08575 1304 aa16.01■□□□□ 0.15
COL12A1-205ENST00000425443 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
COL12A1-205ENST00000425443 KIAA0232Q92628 1395 aa16.01■□□□□ 0.15
COL12A1-205ENST00000425443 MRE11P49959 708 aa16.01■□□□□ 0.15
COL12A1-205ENST00000425443 F6X3S4 739 aa16.01■□□□□ 0.15
COL12A1-205ENST00000425443 RGS12O14924 1447 aa16■□□□□ 0.15
COL12A1-205ENST00000425443 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
COL12A1-205ENST00000425443 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
COL12A1-205ENST00000425443 MEIS3Q99687 375 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 DCTPP1Q9H773 170 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 ANKRD44Q8N8A2 993 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 ATP10DQ9P241 1426 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 CDC45O75419 566 aa15.99■□□□□ 0.15
COL12A1-205ENST00000425443 MSH6P52701 1360 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 TSHZ3Q63HK5 1081 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms