RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
CCDC12-202ENST00000425441 IP6K1Q92551 441 aa18.47■□□□□ 0.55
CCDC12-202ENST00000425441 COG3Q96JB2 828 aa18.46■□□□□ 0.55
CCDC12-202ENST00000425441 BTAF1O14981 1849 aa18.46■□□□□ 0.55
CCDC12-202ENST00000425441 MYOM1P52179 1685 aa18.45■□□□□ 0.54
CCDC12-202ENST00000425441 MTFR1LQ9H019 292 aa18.45■□□□□ 0.54
CCDC12-202ENST00000425441 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
CCDC12-202ENST00000425441 TESK2Q96S53 571 aa18.44■□□□□ 0.54
CCDC12-202ENST00000425441 PDGFDQ9GZP0 370 aaPredicted RBP18.44■□□□□ 0.54
CCDC12-202ENST00000425441 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
CCDC12-202ENST00000425441 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
CCDC12-202ENST00000425441 PTGER2P43116 358 aa18.43■□□□□ 0.54
CCDC12-202ENST00000425441 LTV1Q96GA3 475 aaPredicted RBP18.42■□□□□ 0.54
CCDC12-202ENST00000425441 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
CCDC12-202ENST00000425441 AMPHP49418 695 aa18.41■□□□□ 0.54
CCDC12-202ENST00000425441 HOXC9P31274 260 aa18.4■□□□□ 0.54
CCDC12-202ENST00000425441 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
CCDC12-202ENST00000425441 RTL1A6NKG5 1358 aa18.4■□□□□ 0.54
CCDC12-202ENST00000425441 TMF1P82094 1093 aa18.39■□□□□ 0.53
CCDC12-202ENST00000425441 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
CCDC12-202ENST00000425441 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
CCDC12-202ENST00000425441 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
CCDC12-202ENST00000425441 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
CCDC12-202ENST00000425441 PIP4P2Q8N4L2 257 aa18.37■□□□□ 0.53
CCDC12-202ENST00000425441 FHDC1Q9C0D6 1143 aaPredicted RBP18.37■□□□□ 0.53
CCDC12-202ENST00000425441 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
CCDC12-202ENST00000425441 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
CCDC12-202ENST00000425441 DOT1LQ8TEK3 1739 aa18.36■□□□□ 0.53
CCDC12-202ENST00000425441 SGIP1Q9BQI5 828 aa18.36■□□□□ 0.53
CCDC12-202ENST00000425441 SYT17Q9BSW7 474 aa18.36■□□□□ 0.53
CCDC12-202ENST00000425441 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
CCDC12-202ENST00000425441 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
CCDC12-202ENST00000425441 SP7Q8TDD2 431 aaPredicted RBP18.35■□□□□ 0.53
CCDC12-202ENST00000425441 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
CCDC12-202ENST00000425441 ARXQ96QS3 562 aa18.35■□□□□ 0.53
CCDC12-202ENST00000425441 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
CCDC12-202ENST00000425441 USP47Q96K76 1375 aa18.34■□□□□ 0.53
CCDC12-202ENST00000425441 CGNL1Q0VF96 1302 aa18.34■□□□□ 0.53
CCDC12-202ENST00000425441 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
CCDC12-202ENST00000425441 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-202ENST00000425441 LRRC4BQ9NT99 713 aa18.34■□□□□ 0.53
CCDC12-202ENST00000425441 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
CCDC12-202ENST00000425441 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
CCDC12-202ENST00000425441 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.53
CCDC12-202ENST00000425441 LY75O60449 1722 aa18.33■□□□□ 0.52
CCDC12-202ENST00000425441 FYB1O15117 783 aa18.32■□□□□ 0.52
CCDC12-202ENST00000425441 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
CCDC12-202ENST00000425441 GGNBP2Q9H3C7 697 aa18.32■□□□□ 0.52
CCDC12-202ENST00000425441 MEGF6O75095 1541 aa18.32■□□□□ 0.52
CCDC12-202ENST00000425441 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
CCDC12-202ENST00000425441 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
CCDC12-202ENST00000425441 FBLN1P23142 703 aa18.3■□□□□ 0.52
CCDC12-202ENST00000425441 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
CCDC12-202ENST00000425441 POLD1P28340 1107 aa18.3■□□□□ 0.52
CCDC12-202ENST00000425441 RRS1Q15050 365 aaKnown RBP18.3■□□□□ 0.52
CCDC12-202ENST00000425441 RAPGEF4Q8WZA2 1011 aa18.3■□□□□ 0.52
CCDC12-202ENST00000425441 TFCP2L1Q9NZI6 479 aa18.29■□□□□ 0.52
CCDC12-202ENST00000425441 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
CCDC12-202ENST00000425441 INSRP06213 1382 aa18.29■□□□□ 0.52
CCDC12-202ENST00000425441 FLT4P35916 1363 aa18.29■□□□□ 0.52
CCDC12-202ENST00000425441 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
CCDC12-202ENST00000425441 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
CCDC12-202ENST00000425441 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
CCDC12-202ENST00000425441 NSD2O96028 1365 aa18.28■□□□□ 0.52
CCDC12-202ENST00000425441 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
CCDC12-202ENST00000425441 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.52
CCDC12-202ENST00000425441 TUBGCP6Q96RT7 1819 aa18.27■□□□□ 0.52
CCDC12-202ENST00000425441 CHD4Q14839 1912 aa18.27■□□□□ 0.51
CCDC12-202ENST00000425441 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
CCDC12-202ENST00000425441 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
CCDC12-202ENST00000425441 USHBP1Q8N6Y0 703 aa18.25■□□□□ 0.51
CCDC12-202ENST00000425441 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC12-202ENST00000425441 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
CCDC12-202ENST00000425441 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
CCDC12-202ENST00000425441 KCNQ4P56696 695 aa18.22■□□□□ 0.51
CCDC12-202ENST00000425441 GPR162Q16538 588 aa18.22■□□□□ 0.51
CCDC12-202ENST00000425441 ZNF784Q8NCA9 323 aaPredicted RBP18.22■□□□□ 0.51
CCDC12-202ENST00000425441 NSD3Q9BZ95 1437 aa18.22■□□□□ 0.51
CCDC12-202ENST00000425441 C5P01031 1676 aa18.21■□□□□ 0.51
CCDC12-202ENST00000425441 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
CCDC12-202ENST00000425441 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
CCDC12-202ENST00000425441 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
CCDC12-202ENST00000425441 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
CCDC12-202ENST00000425441 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
CCDC12-202ENST00000425441 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
CCDC12-202ENST00000425441 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
CCDC12-202ENST00000425441 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
CCDC12-202ENST00000425441 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
CCDC12-202ENST00000425441 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
CCDC12-202ENST00000425441 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
CCDC12-202ENST00000425441 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
CCDC12-202ENST00000425441 MPRIPQ6WCQ1 1025 aa18.16■□□□□ 0.5
CCDC12-202ENST00000425441 COL23A1Q86Y22 540 aaPredicted RBP18.16■□□□□ 0.5
CCDC12-202ENST00000425441 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
CCDC12-202ENST00000425441 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
CCDC12-202ENST00000425441 ITGB4P16144 1822 aa18.16■□□□□ 0.5
CCDC12-202ENST00000425441 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
CCDC12-202ENST00000425441 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
CCDC12-202ENST00000425441 CYP27B1O15528 508 aa18.15■□□□□ 0.5
CCDC12-202ENST00000425441 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms