RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 VAMP4O75379 141 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 KIF3AQ9Y496 699 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 PIP4K2AP48426 406 aaPredicted RBP12.27□□□□□ -0.45
VPS37A-202ENST00000425020 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
VPS37A-202ENST00000425020 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
VPS37A-202ENST00000425020 PTCD1O75127 700 aaKnown RBP12.26□□□□□ -0.45
VPS37A-202ENST00000425020 KDM5BQ9UGL1 1544 aa12.26□□□□□ -0.45
VPS37A-202ENST00000425020 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
VPS37A-202ENST00000425020 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
VPS37A-202ENST00000425020 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
VPS37A-202ENST00000425020 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
VPS37A-202ENST00000425020 HOMER1Q86YM7 354 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 CHAMP1Q96JM3 812 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
VPS37A-202ENST00000425020 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
VPS37A-202ENST00000425020 ACEP12821 1306 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 PDE4CQ08493 712 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 CCDC73Q6ZRK6 1079 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 TPM4P67936 248 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 USP25Q9UHP3 1055 aa12.25□□□□□ -0.45
VPS37A-202ENST00000425020 COL17A1Q9UMD9 1497 aaPredicted RBP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 ZNF830Q96NB3 372 aaPredicted RBP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 PLCH2O75038 1416 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 GUCY1B3Q02153 619 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 TTC22Q5TAA0 569 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
VPS37A-202ENST00000425020 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
VPS37A-202ENST00000425020 G2E3Q7L622 706 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 RALYLQ86SE5 291 aaKnown RBP12.23□□□□□ -0.45
VPS37A-202ENST00000425020 MCM2P49736 904 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 TRDNQ13061 729 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
VPS37A-202ENST00000425020 FILIP1Q7Z7B0 1213 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 CKAP2LQ8IYA6 745 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
VPS37A-202ENST00000425020 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
VPS37A-202ENST00000425020 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
VPS37A-202ENST00000425020 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 ZSCAN30Q86W11 494 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 UQCRHLA0A096LP55 91 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 UQCRHP07919 91 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 CPA1P15085 419 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 SYNE3Q6ZMZ3 975 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 ATF3P18847 181 aa12.22□□□□□ -0.45
VPS37A-202ENST00000425020 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.45
VPS37A-202ENST00000425020 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
VPS37A-202ENST00000425020 UHRF1BP1Q6BDS2 1440 aa12.21□□□□□ -0.45
VPS37A-202ENST00000425020 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.45
VPS37A-202ENST00000425020 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 RAD21O60216 631 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 PSMA5P28066 241 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 RRAGDQ9NQL2 400 aaPredicted RBP12.21□□□□□ -0.46
VPS37A-202ENST00000425020 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.46
VPS37A-202ENST00000425020 ME1P48163 572 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 TNMDQ9H2S6 317 aa12.21□□□□□ -0.46
VPS37A-202ENST00000425020 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 PDE1AP54750 535 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 TPD52L1Q16890 204 aaPredicted RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 PA2G4Q9UQ80 394 aaKnown RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 MTHFSDQ2M296 383 aaKnown RBP12.2□□□□□ -0.46
VPS37A-202ENST00000425020 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 LRRC2Q9BYS8 371 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 PRDM10Q9NQV6 1147 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
VPS37A-202ENST00000425020 CLSTN1O94985 981 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 KRT85P78386 507 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 TRIM29Q14134 588 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 ZNF771Q7L3S4 317 aaPredicted RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 SMC2O95347 1197 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
VPS37A-202ENST00000425020 SLC39A6Q13433 755 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 PDILTQ8N807 584 aa12.19□□□□□ -0.46
VPS37A-202ENST00000425020 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms