RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
VSTM1-205ENST00000425006 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
VSTM1-205ENST00000425006 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
VSTM1-205ENST00000425006 CCNL1Q9UK58 526 aaPredicted RBP16.37■□□□□ 0.21
VSTM1-205ENST00000425006 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
VSTM1-205ENST00000425006 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
VSTM1-205ENST00000425006 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
VSTM1-205ENST00000425006 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
VSTM1-205ENST00000425006 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
VSTM1-205ENST00000425006 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
VSTM1-205ENST00000425006 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
VSTM1-205ENST00000425006 FSTL1Q12841 308 aa16.33■□□□□ 0.2
VSTM1-205ENST00000425006 ERBB3P21860 1342 aa16.33■□□□□ 0.2
VSTM1-205ENST00000425006 TONSLQ96HA7 1378 aa16.32■□□□□ 0.2
VSTM1-205ENST00000425006 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
VSTM1-205ENST00000425006 NFAT5O94916 1531 aa16.31■□□□□ 0.2
VSTM1-205ENST00000425006 LY75O60449 1722 aa16.31■□□□□ 0.2
VSTM1-205ENST00000425006 ANKRD36BQ8N2N9 1353 aa16.3■□□□□ 0.2
VSTM1-205ENST00000425006 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
VSTM1-205ENST00000425006 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
VSTM1-205ENST00000425006 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
VSTM1-205ENST00000425006 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
VSTM1-205ENST00000425006 NSD2O96028 1365 aa16.28■□□□□ 0.2
VSTM1-205ENST00000425006 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
VSTM1-205ENST00000425006 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
VSTM1-205ENST00000425006 USP47Q96K76 1375 aa16.26■□□□□ 0.19
VSTM1-205ENST00000425006 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
VSTM1-205ENST00000425006 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
VSTM1-205ENST00000425006 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
VSTM1-205ENST00000425006 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
VSTM1-205ENST00000425006 BCS1LQ9Y276 419 aa16.24■□□□□ 0.19
VSTM1-205ENST00000425006 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
VSTM1-205ENST00000425006 C5P01031 1676 aa16.22■□□□□ 0.19
VSTM1-205ENST00000425006 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.19
VSTM1-205ENST00000425006 PHF14O94880 888 aa16.21■□□□□ 0.19
VSTM1-205ENST00000425006 SMC1BQ8NDV3 1235 aa16.21■□□□□ 0.19
VSTM1-205ENST00000425006 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
VSTM1-205ENST00000425006 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
VSTM1-205ENST00000425006 C9orf131Q5VYM1 1079 aa16.2■□□□□ 0.18
VSTM1-205ENST00000425006 AK7Q96M32 723 aa16.2■□□□□ 0.18
VSTM1-205ENST00000425006 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
VSTM1-205ENST00000425006 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
VSTM1-205ENST00000425006 USP54Q70EL1 1684 aa16.2■□□□□ 0.18
VSTM1-205ENST00000425006 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
VSTM1-205ENST00000425006 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
VSTM1-205ENST00000425006 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
VSTM1-205ENST00000425006 SMIM5Q71RC9 77 aa16.18■□□□□ 0.18
VSTM1-205ENST00000425006 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
VSTM1-205ENST00000425006 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
VSTM1-205ENST00000425006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
VSTM1-205ENST00000425006 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
VSTM1-205ENST00000425006 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
VSTM1-205ENST00000425006 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
VSTM1-205ENST00000425006 C10orf71Q711Q0 1435 aa16.17■□□□□ 0.18
VSTM1-205ENST00000425006 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
VSTM1-205ENST00000425006 LTV1Q96GA3 475 aaPredicted RBP16.16■□□□□ 0.18
VSTM1-205ENST00000425006 LTN1O94822 1766 aa16.15■□□□□ 0.18
VSTM1-205ENST00000425006 FCHSD2O94868 740 aa16.15■□□□□ 0.18
VSTM1-205ENST00000425006 TGFB2P61812 414 aa16.15■□□□□ 0.18
VSTM1-205ENST00000425006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.15■□□□□ 0.18
VSTM1-205ENST00000425006 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
VSTM1-205ENST00000425006 PALLDQ8WX93 1383 aa16.14■□□□□ 0.17
VSTM1-205ENST00000425006 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
VSTM1-205ENST00000425006 NSD3Q9BZ95 1437 aa16.14■□□□□ 0.17
VSTM1-205ENST00000425006 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
VSTM1-205ENST00000425006 MMP10P09238 476 aa16.13■□□□□ 0.17
VSTM1-205ENST00000425006 RNF181Q9P0P0 153 aa16.13■□□□□ 0.17
VSTM1-205ENST00000425006 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
VSTM1-205ENST00000425006 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
VSTM1-205ENST00000425006 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
VSTM1-205ENST00000425006 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
VSTM1-205ENST00000425006 SSFA2P28290 1259 aa16.12■□□□□ 0.17
VSTM1-205ENST00000425006 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
VSTM1-205ENST00000425006 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
VSTM1-205ENST00000425006 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
VSTM1-205ENST00000425006 NME9Q86XW9 330 aa16.11■□□□□ 0.17
VSTM1-205ENST00000425006 FOXN1O15353 648 aa16.1■□□□□ 0.17
VSTM1-205ENST00000425006 DPEP1P16444 411 aa16.1■□□□□ 0.17
VSTM1-205ENST00000425006 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
VSTM1-205ENST00000425006 IP6K1Q92551 441 aa16.09■□□□□ 0.17
VSTM1-205ENST00000425006 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
VSTM1-205ENST00000425006 MEGF6O75095 1541 aa16.09■□□□□ 0.17
VSTM1-205ENST00000425006 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.17
VSTM1-205ENST00000425006 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.17
VSTM1-205ENST00000425006 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
VSTM1-205ENST00000425006 ST20-MTHFSA0A0A6YYL1 179 aa16.06■□□□□ 0.16
VSTM1-205ENST00000425006 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
VSTM1-205ENST00000425006 TESK2Q96S53 571 aa16.06■□□□□ 0.16
VSTM1-205ENST00000425006 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
VSTM1-205ENST00000425006 GNPATO15228 680 aa16.05■□□□□ 0.16
VSTM1-205ENST00000425006 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
VSTM1-205ENST00000425006 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
VSTM1-205ENST00000425006 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
VSTM1-205ENST00000425006 MLLT1Q03111 559 aaPredicted RBP16.04■□□□□ 0.16
VSTM1-205ENST00000425006 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
VSTM1-205ENST00000425006 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
VSTM1-205ENST00000425006 ABHD8Q96I13 439 aa16.04■□□□□ 0.16
VSTM1-205ENST00000425006 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
VSTM1-205ENST00000425006 KCNA3P22001 575 aa16.03■□□□□ 0.16
VSTM1-205ENST00000425006 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms