RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
TMEM248-204ENST00000424964 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
TMEM248-204ENST00000424964 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
TMEM248-204ENST00000424964 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
TMEM248-204ENST00000424964 MYBBP1AQ9BQG0 1328 aaKnown RBP19.88■□□□□ 0.77
TMEM248-204ENST00000424964 HMOX1P09601 288 aa19.88■□□□□ 0.77
TMEM248-204ENST00000424964 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
TMEM248-204ENST00000424964 SPG7Q9UQ90 795 aa19.87■□□□□ 0.77
TMEM248-204ENST00000424964 RGPD1P0DJD0 1748 aa19.87■□□□□ 0.77
TMEM248-204ENST00000424964 TRIM37O94972 964 aa19.86■□□□□ 0.77
TMEM248-204ENST00000424964 CCDC125Q86Z20 511 aa19.86■□□□□ 0.77
TMEM248-204ENST00000424964 PCDH11XQ9BZA7 1347 aa19.84■□□□□ 0.77
TMEM248-204ENST00000424964 PCDH11YQ9BZA8 1340 aa19.84■□□□□ 0.77
TMEM248-204ENST00000424964 EP400Q96L91 3159 aa19.84■□□□□ 0.77
TMEM248-204ENST00000424964 ANP32CO43423 234 aa19.84■□□□□ 0.77
TMEM248-204ENST00000424964 PLEKHO1Q53GL0 409 aaPredicted RBP19.84■□□□□ 0.77
TMEM248-204ENST00000424964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.77
TMEM248-204ENST00000424964 KDRP35968 1356 aa19.83■□□□□ 0.77
TMEM248-204ENST00000424964 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
TMEM248-204ENST00000424964 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.77
TMEM248-204ENST00000424964 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
TMEM248-204ENST00000424964 ACSBG1Q96GR2 724 aa19.82■□□□□ 0.76
TMEM248-204ENST00000424964 CYP27B1O15528 508 aa19.81■□□□□ 0.76
TMEM248-204ENST00000424964 AMOTQ4VCS5 1084 aa19.81■□□□□ 0.76
TMEM248-204ENST00000424964 PKD1L3Q7Z443 1732 aa19.81■□□□□ 0.76
TMEM248-204ENST00000424964 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
TMEM248-204ENST00000424964 BCL9O00512 1426 aa19.8■□□□□ 0.76
TMEM248-204ENST00000424964 IFNL2Q8IZJ0 200 aa19.79■□□□□ 0.76
TMEM248-204ENST00000424964 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
TMEM248-204ENST00000424964 KCNQ2O43526 872 aa19.78■□□□□ 0.76
TMEM248-204ENST00000424964 APBA3O96018 575 aa19.78■□□□□ 0.76
TMEM248-204ENST00000424964 BAG6P46379 1132 aa19.78■□□□□ 0.76
TMEM248-204ENST00000424964 ZNF530Q6P9A1 599 aaPredicted RBP19.78■□□□□ 0.76
TMEM248-204ENST00000424964 BCL11BQ9C0K0 894 aaPredicted RBP19.78■□□□□ 0.76
TMEM248-204ENST00000424964 PHKG2P15735 406 aa19.77■□□□□ 0.76
TMEM248-204ENST00000424964 C1orf141Q5JVX7 400 aa19.77■□□□□ 0.76
TMEM248-204ENST00000424964 DEFB132Q7Z7B7 95 aa19.77■□□□□ 0.76
TMEM248-204ENST00000424964 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
TMEM248-204ENST00000424964 PRKAR2BP31323 418 aa19.76■□□□□ 0.75
TMEM248-204ENST00000424964 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
TMEM248-204ENST00000424964 PTF1AQ7RTS3 328 aa19.76■□□□□ 0.75
TMEM248-204ENST00000424964 RSPH6AQ9H0K4 717 aa19.76■□□□□ 0.75
TMEM248-204ENST00000424964 FCHSD2O94868 740 aa19.75■□□□□ 0.75
TMEM248-204ENST00000424964 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
TMEM248-204ENST00000424964 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
TMEM248-204ENST00000424964 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
TMEM248-204ENST00000424964 HSP90AB1P08238 724 aaKnown RBP19.73■□□□□ 0.75
TMEM248-204ENST00000424964 MTHFSDQ2M296 383 aaKnown RBP19.73■□□□□ 0.75
TMEM248-204ENST00000424964 NHSQ6T4R5 1651 aa19.72■□□□□ 0.75
TMEM248-204ENST00000424964 NEFMP07197 916 aa19.72■□□□□ 0.75
TMEM248-204ENST00000424964 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.75
TMEM248-204ENST00000424964 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
TMEM248-204ENST00000424964 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
TMEM248-204ENST00000424964 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
TMEM248-204ENST00000424964 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
TMEM248-204ENST00000424964 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
TMEM248-204ENST00000424964 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
TMEM248-204ENST00000424964 DCAF5Q96JK2 942 aa19.7■□□□□ 0.74
TMEM248-204ENST00000424964 EZH2Q15910 746 aaKnown RBP19.69■□□□□ 0.74
TMEM248-204ENST00000424964 BTAF1O14981 1849 aa19.68■□□□□ 0.74
TMEM248-204ENST00000424964 PLSCR1O15162 318 aa19.68■□□□□ 0.74
TMEM248-204ENST00000424964 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
TMEM248-204ENST00000424964 CAMKK2Q96RR4 588 aa19.68■□□□□ 0.74
TMEM248-204ENST00000424964 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
TMEM248-204ENST00000424964 ITGB4P16144 1822 aa19.67■□□□□ 0.74
TMEM248-204ENST00000424964 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
TMEM248-204ENST00000424964 ERVV-2B6SEH9 535 aa19.66■□□□□ 0.74
TMEM248-204ENST00000424964 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
TMEM248-204ENST00000424964 GNAT3A8MTJ3 354 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 CABP4P57796 275 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 PIGBQ92521 554 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 PLEKHF1Q96S99 279 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 ADAMTS8Q9UP79 889 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 MAPK8IP3Q9UPT6 1336 aa19.65■□□□□ 0.74
TMEM248-204ENST00000424964 KDM6AO15550 1401 aaPredicted RBP19.65■□□□□ 0.74
TMEM248-204ENST00000424964 LGR6Q9HBX8 967 aa19.64■□□□□ 0.73
TMEM248-204ENST00000424964 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
TMEM248-204ENST00000424964 RNMTO43148 476 aaKnown RBP19.63■□□□□ 0.73
TMEM248-204ENST00000424964 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
TMEM248-204ENST00000424964 TXNRD1Q16881 649 aa19.62■□□□□ 0.73
TMEM248-204ENST00000424964 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
TMEM248-204ENST00000424964 RTF1Q92541 710 aaKnown RBP19.62■□□□□ 0.73
TMEM248-204ENST00000424964 SCN11AQ9UI33 1791 aa19.62■□□□□ 0.73
TMEM248-204ENST00000424964 VIRMAQ69YN4 1812 aaKnown RBP19.61■□□□□ 0.73
TMEM248-204ENST00000424964 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
TMEM248-204ENST00000424964 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
TMEM248-204ENST00000424964 PROM2Q8N271 834 aa19.6■□□□□ 0.73
TMEM248-204ENST00000424964 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
TMEM248-204ENST00000424964 RGPD3A6NKT7 1758 aaPredicted RBP19.6■□□□□ 0.73
TMEM248-204ENST00000424964 RGPD4Q7Z3J3 1758 aa19.6■□□□□ 0.73
TMEM248-204ENST00000424964 IL17REQ8NFR9 667 aa19.59■□□□□ 0.73
TMEM248-204ENST00000424964 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
TMEM248-204ENST00000424964 ASAP1Q9ULH1 1129 aa19.59■□□□□ 0.73
TMEM248-204ENST00000424964 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.72
TMEM248-204ENST00000424964 SLC52A2Q9HAB3 445 aa19.58■□□□□ 0.72
TMEM248-204ENST00000424964 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
TMEM248-204ENST00000424964 HTATSF1O43719 755 aaKnown RBP19.57■□□□□ 0.72
TMEM248-204ENST00000424964 TEFQ10587 303 aa19.57■□□□□ 0.72
TMEM248-204ENST00000424964 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
TMEM248-204ENST00000424964 RREB1Q92766 1687 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms