RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 IL16Q14005 1332 aa19.46■□□□□ 0.71
CALD1-206ENST00000424922 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
CALD1-206ENST00000424922 COL5A2P05997 1499 aaPredicted RBP19.44■□□□□ 0.7
CALD1-206ENST00000424922 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
CALD1-206ENST00000424922 MCM10Q7L590 875 aa19.43■□□□□ 0.7
CALD1-206ENST00000424922 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
CALD1-206ENST00000424922 COL14A1Q05707 1796 aaKnown RBP19.43■□□□□ 0.7
CALD1-206ENST00000424922 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
CALD1-206ENST00000424922 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
CALD1-206ENST00000424922 WDR17Q8IZU2 1322 aa19.42■□□□□ 0.7
CALD1-206ENST00000424922 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
CALD1-206ENST00000424922 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
CALD1-206ENST00000424922 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
CALD1-206ENST00000424922 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
CALD1-206ENST00000424922 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
CALD1-206ENST00000424922 EVA1CP58658 441 aa19.4■□□□□ 0.7
CALD1-206ENST00000424922 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
CALD1-206ENST00000424922 RAPGEF4Q8WZA2 1011 aa19.4■□□□□ 0.7
CALD1-206ENST00000424922 MAP3K5Q99683 1374 aa19.39■□□□□ 0.7
CALD1-206ENST00000424922 GNAI1P63096 354 aa19.39■□□□□ 0.69
CALD1-206ENST00000424922 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
CALD1-206ENST00000424922 IFT57Q9NWB7 429 aa19.39■□□□□ 0.69
CALD1-206ENST00000424922 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
CALD1-206ENST00000424922 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
CALD1-206ENST00000424922 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
CALD1-206ENST00000424922 ADAMTS2O95450 1211 aa19.39■□□□□ 0.69
CALD1-206ENST00000424922 NUTM2AQ8IVF1 878 aaPredicted RBP19.39■□□□□ 0.69
CALD1-206ENST00000424922 HTATSF1O43719 755 aaKnown RBP19.38■□□□□ 0.69
CALD1-206ENST00000424922 PLCH1Q4KWH8 1693 aa19.38■□□□□ 0.69
CALD1-206ENST00000424922 ZNF853P0CG23 659 aa19.37■□□□□ 0.69
CALD1-206ENST00000424922 ZNF530Q6P9A1 599 aaPredicted RBP19.37■□□□□ 0.69
CALD1-206ENST00000424922 LARP1Q6PKG0 1096 aaKnown RBP19.37■□□□□ 0.69
CALD1-206ENST00000424922 CFAP44Q96MT7 982 aa19.37■□□□□ 0.69
CALD1-206ENST00000424922 MEGF6O75095 1541 aa19.37■□□□□ 0.69
CALD1-206ENST00000424922 TATP17735 454 aaPredicted RBP19.37■□□□□ 0.69
CALD1-206ENST00000424922 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
CALD1-206ENST00000424922 LRRC37A3O60309 1634 aa19.36■□□□□ 0.69
CALD1-206ENST00000424922 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
CALD1-206ENST00000424922 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
CALD1-206ENST00000424922 CRB1P82279 1406 aa19.35■□□□□ 0.69
CALD1-206ENST00000424922 JCADQ9P266 1359 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 AKAP4Q5JQC9 854 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
CALD1-206ENST00000424922 EXOC6Q8TAG9 804 aa19.33■□□□□ 0.68
CALD1-206ENST00000424922 CHL1O00533 1208 aa19.32■□□□□ 0.68
CALD1-206ENST00000424922 PLIN1O60240 522 aa19.32■□□□□ 0.68
CALD1-206ENST00000424922 BCAR3O75815 825 aa19.32■□□□□ 0.68
CALD1-206ENST00000424922 LGR6Q9HBX8 967 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 USP35Q9P2H5 1018 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 NRAPQ86VF7 1730 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 MPRIPQ6WCQ1 1025 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.31■□□□□ 0.682e-7■■■□□ 15.9
CALD1-206ENST00000424922 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
CALD1-206ENST00000424922 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
CALD1-206ENST00000424922 HSPA1LP34931 641 aa19.3■□□□□ 0.68
CALD1-206ENST00000424922 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
CALD1-206ENST00000424922 NWD2Q9ULI1 1742 aa19.3■□□□□ 0.68
CALD1-206ENST00000424922 SCN11AQ9UI33 1791 aa19.3■□□□□ 0.68
CALD1-206ENST00000424922 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
CALD1-206ENST00000424922 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
CALD1-206ENST00000424922 OVOS2A0A0G2JMS6 1433 aa19.29■□□□□ 0.68
CALD1-206ENST00000424922 IL2RBP14784 551 aa19.28■□□□□ 0.68
CALD1-206ENST00000424922 TSPYL4Q9UJ04 414 aa19.28■□□□□ 0.68
CALD1-206ENST00000424922 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
CALD1-206ENST00000424922 RNMTO43148 476 aaKnown RBP19.27■□□□□ 0.68
CALD1-206ENST00000424922 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
CALD1-206ENST00000424922 BCL2L13Q9BXK5 485 aa19.27■□□□□ 0.68
CALD1-206ENST00000424922 ADAMTS7Q9UKP4 1686 aa19.27■□□□□ 0.68
CALD1-206ENST00000424922 PHKG2P15735 406 aa19.27■□□□□ 0.67
CALD1-206ENST00000424922 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.67
CALD1-206ENST00000424922 C8orf58Q8NAV2 365 aa19.27■□□□□ 0.67
CALD1-206ENST00000424922 SHANK3Q9BYB0 1731 aa19.26■□□□□ 0.67
CALD1-206ENST00000424922 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
CALD1-206ENST00000424922 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
CALD1-206ENST00000424922 CYP27B1O15528 508 aa19.25■□□□□ 0.67
CALD1-206ENST00000424922 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
CALD1-206ENST00000424922 ZCRB1Q8TBF4 217 aaKnown RBP19.25■□□□□ 0.67
CALD1-206ENST00000424922 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
CALD1-206ENST00000424922 SPATA31A6Q5VVP1 1343 aa19.25■□□□□ 0.67
CALD1-206ENST00000424922 TEFQ10587 303 aa19.25■□□□□ 0.67
CALD1-206ENST00000424922 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
CALD1-206ENST00000424922 SLIT2O94813 1529 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 VAMP4O75379 141 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 KRT24Q2M2I5 525 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 KDM3BQ7LBC6 1761 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 SSH1Q8WYL5 1049 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 C8orf37Q96NL8 207 aa19.24■□□□□ 0.67
CALD1-206ENST00000424922 LRP6O75581 1613 aa19.23■□□□□ 0.67
CALD1-206ENST00000424922 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
CALD1-206ENST00000424922 KDM6AO15550 1401 aaPredicted RBP19.22■□□□□ 0.67
CALD1-206ENST00000424922 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
CALD1-206ENST00000424922 FRAT1Q92837 279 aaPredicted RBP19.22■□□□□ 0.67
CALD1-206ENST00000424922 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
CALD1-206ENST00000424922 PCDH11XQ9BZA7 1347 aa19.22■□□□□ 0.67
CALD1-206ENST00000424922 PCDH11YQ9BZA8 1340 aa19.22■□□□□ 0.67
CALD1-206ENST00000424922 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms