RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 NEFMP07197 916 aa18.38■□□□□ 0.53
LINC00839-201ENST00000424751 NGEFQ8N5V2 710 aa18.38■□□□□ 0.53
LINC00839-201ENST00000424751 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
LINC00839-201ENST00000424751 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
LINC00839-201ENST00000424751 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
LINC00839-201ENST00000424751 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
LINC00839-201ENST00000424751 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
LINC00839-201ENST00000424751 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
LINC00839-201ENST00000424751 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
LINC00839-201ENST00000424751 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
LINC00839-201ENST00000424751 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
LINC00839-201ENST00000424751 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
LINC00839-201ENST00000424751 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
LINC00839-201ENST00000424751 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
LINC00839-201ENST00000424751 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
LINC00839-201ENST00000424751 ERBB3P21860 1342 aa18.34■□□□□ 0.53
LINC00839-201ENST00000424751 PANK1Q8TE04 598 aa18.33■□□□□ 0.53
LINC00839-201ENST00000424751 RLBP1P12271 317 aa18.32■□□□□ 0.52
LINC00839-201ENST00000424751 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
LINC00839-201ENST00000424751 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
LINC00839-201ENST00000424751 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
LINC00839-201ENST00000424751 LGR6Q9HBX8 967 aa18.32■□□□□ 0.52
LINC00839-201ENST00000424751 CRB1P82279 1406 aa18.31■□□□□ 0.52
LINC00839-201ENST00000424751 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
LINC00839-201ENST00000424751 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
LINC00839-201ENST00000424751 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
LINC00839-201ENST00000424751 IL16Q14005 1332 aa18.3■□□□□ 0.52
LINC00839-201ENST00000424751 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
LINC00839-201ENST00000424751 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
LINC00839-201ENST00000424751 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
LINC00839-201ENST00000424751 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
LINC00839-201ENST00000424751 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
LINC00839-201ENST00000424751 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
LINC00839-201ENST00000424751 LMO7Q8WWI1 1683 aa18.28■□□□□ 0.52
LINC00839-201ENST00000424751 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
LINC00839-201ENST00000424751 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.52
LINC00839-201ENST00000424751 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
LINC00839-201ENST00000424751 MEGF6O75095 1541 aa18.27■□□□□ 0.52
LINC00839-201ENST00000424751 VAMP4O75379 141 aa18.26■□□□□ 0.51
LINC00839-201ENST00000424751 IL27Q8NEV9 243 aa18.26■□□□□ 0.51
LINC00839-201ENST00000424751 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
LINC00839-201ENST00000424751 GNAI1P63096 354 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 NCAPD2Q15021 1401 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 CHL1O00533 1208 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
LINC00839-201ENST00000424751 KCNQ3O43525 872 aa18.24■□□□□ 0.51
LINC00839-201ENST00000424751 ZNF530Q6P9A1 599 aaPredicted RBP18.24■□□□□ 0.51
LINC00839-201ENST00000424751 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
LINC00839-201ENST00000424751 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
LINC00839-201ENST00000424751 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
LINC00839-201ENST00000424751 CPDO75976 1380 aa18.24■□□□□ 0.51
LINC00839-201ENST00000424751 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
LINC00839-201ENST00000424751 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
LINC00839-201ENST00000424751 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
LINC00839-201ENST00000424751 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
LINC00839-201ENST00000424751 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
LINC00839-201ENST00000424751 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
LINC00839-201ENST00000424751 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
LINC00839-201ENST00000424751 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
LINC00839-201ENST00000424751 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
LINC00839-201ENST00000424751 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.5
LINC00839-201ENST00000424751 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
LINC00839-201ENST00000424751 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
LINC00839-201ENST00000424751 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
LINC00839-201ENST00000424751 TRIM27P14373 513 aa18.2■□□□□ 0.5
LINC00839-201ENST00000424751 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
LINC00839-201ENST00000424751 ADAMTS2O95450 1211 aa18.19■□□□□ 0.5
LINC00839-201ENST00000424751 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
LINC00839-201ENST00000424751 GSE1Q14687 1217 aa18.19■□□□□ 0.5
LINC00839-201ENST00000424751 CENPQQ7L2Z9 268 aaPredicted RBP18.19■□□□□ 0.5
LINC00839-201ENST00000424751 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00839-201ENST00000424751 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00839-201ENST00000424751 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00839-201ENST00000424751 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
LINC00839-201ENST00000424751 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
LINC00839-201ENST00000424751 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
LINC00839-201ENST00000424751 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
LINC00839-201ENST00000424751 CYP27B1O15528 508 aa18.16■□□□□ 0.5
LINC00839-201ENST00000424751 CALD1Q05682 793 aaKnown RBP18.16■□□□□ 0.5
LINC00839-201ENST00000424751 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
LINC00839-201ENST00000424751 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
LINC00839-201ENST00000424751 PRAMEF22A3QJZ6 481 aa18.15■□□□□ 0.5
LINC00839-201ENST00000424751 RNMTO43148 476 aaKnown RBP18.15■□□□□ 0.5
LINC00839-201ENST00000424751 PRKCSHP14314 528 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-201ENST00000424751 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
LINC00839-201ENST00000424751 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
LINC00839-201ENST00000424751 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-201ENST00000424751 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
LINC00839-201ENST00000424751 G2E3Q7L622 706 aa18.15■□□□□ 0.5
LINC00839-201ENST00000424751 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-201ENST00000424751 NFKBIBQ15653 356 aa18.14■□□□□ 0.49
LINC00839-201ENST00000424751 TMEM57Q8N5G2 664 aa18.14■□□□□ 0.49
LINC00839-201ENST00000424751 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
LINC00839-201ENST00000424751 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
LINC00839-201ENST00000424751 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
LINC00839-201ENST00000424751 TATP17735 454 aaPredicted RBP18.12■□□□□ 0.49
LINC00839-201ENST00000424751 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
LINC00839-201ENST00000424751 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms