RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
PRNP-202ENST00000424424 EYA1Q99502 592 aa25.37■■□□□ 1.65
PRNP-202ENST00000424424 CAMKK2Q96RR4 588 aa25.36■■□□□ 1.65
PRNP-202ENST00000424424 SHANK3Q9BYB0 1731 aa25.35■■□□□ 1.65
PRNP-202ENST00000424424 CNGB1Q14028 1251 aaPredicted RBP25.35■■□□□ 1.65
PRNP-202ENST00000424424 NHSQ6T4R5 1651 aa25.34■■□□□ 1.65
PRNP-202ENST00000424424 NCAPD2Q15021 1401 aa25.34■■□□□ 1.65
PRNP-202ENST00000424424 ACSBG1Q96GR2 724 aa25.33■■□□□ 1.65
PRNP-202ENST00000424424 RGPD3A6NKT7 1758 aaPredicted RBP25.33■■□□□ 1.65
PRNP-202ENST00000424424 RGPD4Q7Z3J3 1758 aa25.33■■□□□ 1.65
PRNP-202ENST00000424424 PLSCR1O15162 318 aa25.32■■□□□ 1.64
PRNP-202ENST00000424424 MTHFSP49914 203 aa25.32■■□□□ 1.64
PRNP-202ENST00000424424 PCDH11XQ9BZA7 1347 aa25.31■■□□□ 1.64
PRNP-202ENST00000424424 PCDH11YQ9BZA8 1340 aa25.31■■□□□ 1.64
PRNP-202ENST00000424424 RREB1Q92766 1687 aa25.3■■□□□ 1.64
PRNP-202ENST00000424424 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
PRNP-202ENST00000424424 KCNQ2O43526 872 aa25.29■■□□□ 1.64
PRNP-202ENST00000424424 PTF1AQ7RTS3 328 aa25.29■■□□□ 1.64
PRNP-202ENST00000424424 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
PRNP-202ENST00000424424 IGSF1Q8N6C5 1336 aa25.29■■□□□ 1.64
PRNP-202ENST00000424424 DOT1LQ8TEK3 1739 aa25.27■■□□□ 1.64
PRNP-202ENST00000424424 BTAF1O14981 1849 aa25.26■■□□□ 1.63
PRNP-202ENST00000424424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
PRNP-202ENST00000424424 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
PRNP-202ENST00000424424 SYTL4Q96C24 671 aaPredicted RBP25.25■■□□□ 1.63
PRNP-202ENST00000424424 PLEKHG2Q9H7P9 1386 aa25.25■■□□□ 1.63
PRNP-202ENST00000424424 IL13P35225 146 aa25.24■■□□□ 1.63
PRNP-202ENST00000424424 NBPF14Q5TI25 921 aa25.24■■□□□ 1.63
PRNP-202ENST00000424424 DIAPH1O60610 1272 aaKnown RBP25.22■■□□□ 1.63
PRNP-202ENST00000424424 PRIM1P49642 420 aaKnown RBP25.22■■□□□ 1.63
PRNP-202ENST00000424424 CYP27B1O15528 508 aa25.21■■□□□ 1.63
PRNP-202ENST00000424424 SULT6B1Q6IMI4 303 aa25.2■■□□□ 1.62
PRNP-202ENST00000424424 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
PRNP-202ENST00000424424 IFNL2Q8IZJ0 200 aa25.19■■□□□ 1.62
PRNP-202ENST00000424424 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
PRNP-202ENST00000424424 TXNRD1Q16881 649 aa25.18■■□□□ 1.62
PRNP-202ENST00000424424 AMOTQ4VCS5 1084 aa25.18■■□□□ 1.62
PRNP-202ENST00000424424 CFAP53Q96M91 514 aa25.18■■□□□ 1.62
PRNP-202ENST00000424424 R3HDM1Q15032 1099 aaKnown RBP25.17■■□□□ 1.62
PRNP-202ENST00000424424 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
PRNP-202ENST00000424424 DDX10Q13206 875 aaKnown RBP25.16■■□□□ 1.62
PRNP-202ENST00000424424 NKX1-1Q15270 411 aaPredicted RBP25.16■■□□□ 1.62
PRNP-202ENST00000424424 PROM2Q8N271 834 aa25.16■■□□□ 1.62
PRNP-202ENST00000424424 ITGB4P16144 1822 aa25.16■■□□□ 1.62
PRNP-202ENST00000424424 KDRP35968 1356 aa25.16■■□□□ 1.62
PRNP-202ENST00000424424 PHKG2P15735 406 aa25.15■■□□□ 1.62
PRNP-202ENST00000424424 PPP2R1AP30153 589 aa25.14■■□□□ 1.62
PRNP-202ENST00000424424 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
PRNP-202ENST00000424424 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
PRNP-202ENST00000424424 HMOX1P09601 288 aa25.12■■□□□ 1.61
PRNP-202ENST00000424424 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
PRNP-202ENST00000424424 COL3A1P02461 1466 aaPredicted RBP25.12■■□□□ 1.61
PRNP-202ENST00000424424 U2SURPO15042 1029 aaKnown RBP25.11■■□□□ 1.61
PRNP-202ENST00000424424 ZNF530Q6P9A1 599 aaPredicted RBP25.11■■□□□ 1.61
PRNP-202ENST00000424424 LY75O60449 1722 aa25.1■■□□□ 1.61
PRNP-202ENST00000424424 C1orf141Q5JVX7 400 aa25.1■■□□□ 1.61
PRNP-202ENST00000424424 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
PRNP-202ENST00000424424 STK32BQ9NY57 414 aa25.09■■□□□ 1.61
PRNP-202ENST00000424424 NUDCQ9Y266 331 aa25.09■■□□□ 1.61
PRNP-202ENST00000424424 LRP5O75197 1615 aa25.08■■□□□ 1.61
PRNP-202ENST00000424424 DCAF5Q96JK2 942 aa25.07■■□□□ 1.6
PRNP-202ENST00000424424 TMOD3Q9NYL9 352 aa25.07■■□□□ 1.6
PRNP-202ENST00000424424 SMARCC1Q92922 1105 aaPredicted RBP25.05■■□□□ 1.6
PRNP-202ENST00000424424 ANO8Q9HCE9 1232 aaPredicted RBP25.05■■□□□ 1.6
PRNP-202ENST00000424424 ERVV-2B6SEH9 535 aa25.04■■□□□ 1.6
PRNP-202ENST00000424424 HMGB2P26583 209 aaKnown RBP25.04■■□□□ 1.6
PRNP-202ENST00000424424 RALBP1Q15311 655 aa25.04■■□□□ 1.6
PRNP-202ENST00000424424 SLC15A2Q16348 729 aa25.04■■□□□ 1.6
PRNP-202ENST00000424424 PIGBQ92521 554 aa25.03■■□□□ 1.6
PRNP-202ENST00000424424 LRRC4BQ9NT99 713 aa25.03■■□□□ 1.6
PRNP-202ENST00000424424 CCNL1Q9UK58 526 aaPredicted RBP25.03■■□□□ 1.6
PRNP-202ENST00000424424 AKAP4Q5JQC9 854 aa25.02■■□□□ 1.6
PRNP-202ENST00000424424 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
PRNP-202ENST00000424424 PALLDQ8WX93 1383 aa25.01■■□□□ 1.59
PRNP-202ENST00000424424 SCN11AQ9UI33 1791 aa25■■□□□ 1.59
PRNP-202ENST00000424424 VIRMAQ69YN4 1812 aaKnown RBP25■■□□□ 1.59
PRNP-202ENST00000424424 CABP4P57796 275 aa24.99■■□□□ 1.59
PRNP-202ENST00000424424 KDM6AO15550 1401 aaPredicted RBP24.98■■□□□ 1.59
PRNP-202ENST00000424424 U2AF1L5P0DN76 240 aaPredicted RBP24.98■■□□□ 1.59
PRNP-202ENST00000424424 U2AF1Q01081 240 aaKnown RBP eCLIP24.98■■□□□ 1.59
PRNP-202ENST00000424424 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
PRNP-202ENST00000424424 KCNQ4P56696 695 aa24.97■■□□□ 1.59
PRNP-202ENST00000424424 GAS2L2Q8NHY3 880 aa24.96■■□□□ 1.59
PRNP-202ENST00000424424 TAF1LQ8IZX4 1826 aa24.96■■□□□ 1.59
PRNP-202ENST00000424424 C5P01031 1676 aa24.95■■□□□ 1.58
PRNP-202ENST00000424424 ASAP1Q9ULH1 1129 aa24.95■■□□□ 1.58
PRNP-202ENST00000424424 CASZ1Q86V15 1759 aa24.95■■□□□ 1.58
PRNP-202ENST00000424424 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
PRNP-202ENST00000424424 FCHSD2O94868 740 aa24.94■■□□□ 1.58
PRNP-202ENST00000424424 PRKAR2BP31323 418 aa24.94■■□□□ 1.58
PRNP-202ENST00000424424 RSPH6AQ9H0K4 717 aa24.94■■□□□ 1.58
PRNP-202ENST00000424424 QSER1Q2KHR3 1735 aa24.94■■□□□ 1.58
PRNP-202ENST00000424424 ZNF827Q17R98 1081 aa24.93■■□□□ 1.58
PRNP-202ENST00000424424 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
PRNP-202ENST00000424424 ATG3Q9NT62 314 aa24.93■■□□□ 1.58
PRNP-202ENST00000424424 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
PRNP-202ENST00000424424 NFATC2IPQ8NCF5 419 aa24.92■■□□□ 1.58
PRNP-202ENST00000424424 SPON1Q9HCB6 807 aa24.92■■□□□ 1.58
PRNP-202ENST00000424424 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
PRNP-202ENST00000424424 LOC102724428A0A0B4J2F2 783 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms