RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
LAMA4-207ENST00000424408 CCDC57Q2TAC2 916 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 CDKL5O76039 1030 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 LMAN1P49257 510 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 IFFO1Q0D2I5 559 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 USP25Q9UHP3 1055 aa14.16□□□□□ -0.14
LAMA4-207ENST00000424408 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
LAMA4-207ENST00000424408 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
LAMA4-207ENST00000424408 GTF2A1P52655 376 aaPredicted RBP14.15□□□□□ -0.14
LAMA4-207ENST00000424408 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
LAMA4-207ENST00000424408 SRCIN1Q9C0H9 1055 aa14.15□□□□□ -0.14
LAMA4-207ENST00000424408 SSR1P43307 286 aaKnown RBP14.15□□□□□ -0.14
LAMA4-207ENST00000424408 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
LAMA4-207ENST00000424408 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
LAMA4-207ENST00000424408 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
LAMA4-207ENST00000424408 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
LAMA4-207ENST00000424408 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
LAMA4-207ENST00000424408 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 DYNC1I1O14576 645 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 ATF7IPQ6VMQ6 1270 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 IMMTQ16891 758 aaKnown RBP14.14□□□□□ -0.15
LAMA4-207ENST00000424408 CCDC83Q8IWF9 413 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 CEP63Q96MT8 703 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 SSFA2P28290 1259 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 NUTM2GQ5VZR2 741 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 ZNF428Q96B54 188 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 CNNM1Q9NRU3 951 aa14.14□□□□□ -0.15
LAMA4-207ENST00000424408 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 CTR9Q6PD62 1173 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 FERMT3Q86UX7 667 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 AACSQ86V21 672 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 LUZP1Q86V48 1076 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 SMC1AQ14683 1233 aaKnown RBP14.13□□□□□ -0.15
LAMA4-207ENST00000424408 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
LAMA4-207ENST00000424408 NACAP1Q9BZK3 213 aa14.13□□□□□ -0.15
LAMA4-207ENST00000424408 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 GCOM1H8Y6P7 765 aaPredicted RBP14.12□□□□□ -0.15
LAMA4-207ENST00000424408 MYZAPP0CAP1 466 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 DNA2P51530 1060 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 KIF6Q6ZMV9 814 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 MNAT1P51948 309 aa14.12□□□□□ -0.15
LAMA4-207ENST00000424408 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
LAMA4-207ENST00000424408 ADCY5O95622 1261 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
LAMA4-207ENST00000424408 DNAAF4Q8WXU2 420 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 CEP131Q9UPN4 1083 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 CCDC175P0C221 793 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 CEP135Q66GS9 1140 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 KLHL10Q6JEL2 608 aa14.11□□□□□ -0.15
LAMA4-207ENST00000424408 KRT32Q14532 448 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 CKAP2LQ8IYA6 745 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 MCM5P33992 734 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 CPLX3Q8WVH0 158 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 PIBF1Q8WXW3 757 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 WASF1Q92558 559 aa14.1□□□□□ -0.15
LAMA4-207ENST00000424408 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 SNW1Q13573 536 aaKnown RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 NEMFO60524 1076 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 NBPF1Q3BBV0 1214 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 NUP88Q99567 741 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 IL1RAPL2Q9NP60 686 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 TMC6Q7Z403 805 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 STAMBPO95630 424 aa14.09□□□□□ -0.15
LAMA4-207ENST00000424408 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 GNL3LQ9NVN8 582 aaKnown RBP14.09□□□□□ -0.15
LAMA4-207ENST00000424408 ZSCAN25Q6NSZ9 544 aa14.08□□□□□ -0.15
LAMA4-207ENST00000424408 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.15
LAMA4-207ENST00000424408 PRIMPOLQ96LW4 560 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 HDGFL1Q5TGJ6 251 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 PAFAH1B1P43034 410 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 KRT222Q8N1A0 295 aa14.08□□□□□ -0.16
LAMA4-207ENST00000424408 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
LAMA4-207ENST00000424408 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 MAATS1Q7Z4T9 603 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 UBAC1Q9BSL1 405 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 NEBLO76041 1014 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 MATR3P43243 847 aaKnown RBP eCLIP14.07□□□□□ -0.16
LAMA4-207ENST00000424408 GSDMDP57764 484 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 RUSC2Q8N2Y8 1516 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 SCAND2PQ9GZW5 306 aaPredicted RBP14.07□□□□□ -0.16
LAMA4-207ENST00000424408 ATP2C2O75185 946 aa14.07□□□□□ -0.16
LAMA4-207ENST00000424408 PRPF40BQ6NWY9 871 aaKnown RBP14.07□□□□□ -0.16
LAMA4-207ENST00000424408 SRGAP3O43295 1099 aa14.06□□□□□ -0.16
LAMA4-207ENST00000424408 LIG1P18858 919 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms