RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 HOXC9P31274 260 aa9.41□□□□□ -0.9
SCN7A-203ENST00000424326 RILPL2Q969X0 211 aa9.41□□□□□ -0.9
SCN7A-203ENST00000424326 NAP1L2Q9ULW6 460 aaPredicted RBP9.41□□□□□ -0.9
SCN7A-203ENST00000424326 PPRC1Q5VV67 1664 aaKnown RBP9.41□□□□□ -0.9
SCN7A-203ENST00000424326 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
SCN7A-203ENST00000424326 NOL10Q9BSC4 688 aaKnown RBP9.41□□□□□ -0.9
SCN7A-203ENST00000424326 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
SCN7A-203ENST00000424326 KIF24Q5T7B8 1368 aa9.4□□□□□ -0.9
SCN7A-203ENST00000424326 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
SCN7A-203ENST00000424326 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
SCN7A-203ENST00000424326 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
SCN7A-203ENST00000424326 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.9
SCN7A-203ENST00000424326 MAP3K19Q56UN5 1328 aa9.4□□□□□ -0.91
SCN7A-203ENST00000424326 USHBP1Q8N6Y0 703 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 PHF23Q9BUL5 403 aaPredicted RBP9.39□□□□□ -0.91
SCN7A-203ENST00000424326 PLEKHH1Q9ULM0 1364 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 CDC45O75419 566 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 ZKSCAN1P17029 563 aaPredicted RBP9.39□□□□□ -0.91
SCN7A-203ENST00000424326 NBR1Q14596 966 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 AMOTL1Q8IY63 956 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
SCN7A-203ENST00000424326 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 MADDQ8WXG6 1647 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
SCN7A-203ENST00000424326 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 VPS37DQ86XT2 251 aa9.39□□□□□ -0.91
SCN7A-203ENST00000424326 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 CLTCQ00610 1675 aaKnown RBP9.38□□□□□ -0.91
SCN7A-203ENST00000424326 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 IL2RBP14784 551 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 IL13P35225 146 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 MBIPQ9NS73 344 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
SCN7A-203ENST00000424326 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
SCN7A-203ENST00000424326 LRRCC1Q9C099 1032 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
SCN7A-203ENST00000424326 LNPKQ9C0E8 428 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 A0A087WZG4 1122 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
SCN7A-203ENST00000424326 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 DCTN1Q14203 1278 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 DLC1Q96QB1 1528 aa9.37□□□□□ -0.91
SCN7A-203ENST00000424326 EYA1Q99502 592 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 MYL6BP14649 208 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 REREQ9P2R6 1566 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 GNL3LQ9NVN8 582 aaKnown RBP9.36□□□□□ -0.91
SCN7A-203ENST00000424326 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
SCN7A-203ENST00000424326 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
SCN7A-203ENST00000424326 CHRNA2Q15822 529 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 DNAAF4Q8WXU2 420 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 ORAI2Q96SN7 254 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 VWDEQ8N2E2 1590 aa9.36□□□□□ -0.91
SCN7A-203ENST00000424326 PDZRN3Q9UPQ7 1066 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 CCDC57Q2TAC2 916 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 HOXB7P09629 217 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 USP6P35125 1406 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 CCDC158Q5M9N0 1113 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 KIAA1210Q9ULL0 1709 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 FLIIQ13045 1269 aa9.35□□□□□ -0.91
SCN7A-203ENST00000424326 MTHFSDQ2M296 383 aaKnown RBP9.35□□□□□ -0.91
SCN7A-203ENST00000424326 NEUROD6Q96NK8 337 aa9.34□□□□□ -0.91
SCN7A-203ENST00000424326 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
SCN7A-203ENST00000424326 PTCH1Q13635 1447 aa9.34□□□□□ -0.91
SCN7A-203ENST00000424326 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
SCN7A-203ENST00000424326 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
SCN7A-203ENST00000424326 SYNE3Q6ZMZ3 975 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 CCDC34Q96HJ3 373 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 SRGAP3O43295 1099 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 TRDNQ13061 729 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 DDB1Q16531 1140 aa9.33□□□□□ -0.92
SCN7A-203ENST00000424326 SYAP1Q96A49 352 aaPredicted RBP9.33□□□□□ -0.92
SCN7A-203ENST00000424326 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCN7A-203ENST00000424326 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 ALDH1L1O75891 902 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 PSMA5P28066 241 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 KIF1BPQ96EK5 621 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 ANO8Q9HCE9 1232 aaPredicted RBP9.32□□□□□ -0.92
SCN7A-203ENST00000424326 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
SCN7A-203ENST00000424326 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms