RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
GTF3C2-204ENST00000423998 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
GTF3C2-204ENST00000423998 BCL9O00512 1426 aa18.44■□□□□ 0.54
GTF3C2-204ENST00000423998 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
GTF3C2-204ENST00000423998 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
GTF3C2-204ENST00000423998 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
GTF3C2-204ENST00000423998 U2SURPO15042 1029 aaKnown RBP18.43■□□□□ 0.54
GTF3C2-204ENST00000423998 BAG6P46379 1132 aa18.43■□□□□ 0.54
GTF3C2-204ENST00000423998 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
GTF3C2-204ENST00000423998 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
GTF3C2-204ENST00000423998 NCAPD2Q15021 1401 aa18.41■□□□□ 0.54
GTF3C2-204ENST00000423998 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
GTF3C2-204ENST00000423998 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
GTF3C2-204ENST00000423998 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
GTF3C2-204ENST00000423998 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
GTF3C2-204ENST00000423998 FCHSD2O94868 740 aa18.39■□□□□ 0.53
GTF3C2-204ENST00000423998 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
GTF3C2-204ENST00000423998 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
GTF3C2-204ENST00000423998 KDRP35968 1356 aa18.39■□□□□ 0.53
GTF3C2-204ENST00000423998 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
GTF3C2-204ENST00000423998 TRIM37O94972 964 aa18.37■□□□□ 0.53
GTF3C2-204ENST00000423998 APBA3O96018 575 aa18.36■□□□□ 0.53
GTF3C2-204ENST00000423998 FAM182BQ5T319 152 aa18.36■□□□□ 0.53
GTF3C2-204ENST00000423998 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
GTF3C2-204ENST00000423998 MEGF6O75095 1541 aa18.35■□□□□ 0.53
GTF3C2-204ENST00000423998 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-204ENST00000423998 GAS2L2Q8NHY3 880 aa18.35■□□□□ 0.53
GTF3C2-204ENST00000423998 PLSCR1O15162 318 aa18.34■□□□□ 0.53
GTF3C2-204ENST00000423998 HMOX1P09601 288 aa18.34■□□□□ 0.53
GTF3C2-204ENST00000423998 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
GTF3C2-204ENST00000423998 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
GTF3C2-204ENST00000423998 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
GTF3C2-204ENST00000423998 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
GTF3C2-204ENST00000423998 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
GTF3C2-204ENST00000423998 PHKG2P15735 406 aa18.32■□□□□ 0.52
GTF3C2-204ENST00000423998 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
GTF3C2-204ENST00000423998 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
GTF3C2-204ENST00000423998 CYP27B1O15528 508 aa18.31■□□□□ 0.52
GTF3C2-204ENST00000423998 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
GTF3C2-204ENST00000423998 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
GTF3C2-204ENST00000423998 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 ACSBG1Q96GR2 724 aa18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
GTF3C2-204ENST00000423998 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
GTF3C2-204ENST00000423998 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
GTF3C2-204ENST00000423998 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
GTF3C2-204ENST00000423998 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
GTF3C2-204ENST00000423998 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
GTF3C2-204ENST00000423998 GNAT3A8MTJ3 354 aa18.26■□□□□ 0.51
GTF3C2-204ENST00000423998 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
GTF3C2-204ENST00000423998 CABP4P57796 275 aa18.26■□□□□ 0.51
GTF3C2-204ENST00000423998 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
GTF3C2-204ENST00000423998 SLC27A3Q5K4L6 730 aa18.25■□□□□ 0.51
GTF3C2-204ENST00000423998 MPRIPQ6WCQ1 1025 aa18.25■□□□□ 0.51
GTF3C2-204ENST00000423998 PKD1L3Q7Z443 1732 aa18.24■□□□□ 0.51
GTF3C2-204ENST00000423998 KCNQ2O43526 872 aa18.24■□□□□ 0.51
GTF3C2-204ENST00000423998 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
GTF3C2-204ENST00000423998 EP400Q96L91 3159 aa18.24■□□□□ 0.51
GTF3C2-204ENST00000423998 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
GTF3C2-204ENST00000423998 DEFB132Q7Z7B7 95 aa18.23■□□□□ 0.51
GTF3C2-204ENST00000423998 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
GTF3C2-204ENST00000423998 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
GTF3C2-204ENST00000423998 TEFQ10587 303 aa18.21■□□□□ 0.51
GTF3C2-204ENST00000423998 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
GTF3C2-204ENST00000423998 EZH2Q15910 746 aaKnown RBP18.2■□□□□ 0.5
GTF3C2-204ENST00000423998 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
GTF3C2-204ENST00000423998 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
GTF3C2-204ENST00000423998 TXNRD1Q16881 649 aa18.19■□□□□ 0.5
GTF3C2-204ENST00000423998 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
GTF3C2-204ENST00000423998 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
GTF3C2-204ENST00000423998 PIGBQ92521 554 aa18.18■□□□□ 0.5
GTF3C2-204ENST00000423998 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
GTF3C2-204ENST00000423998 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 NFE2L2Q16236 605 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 SLC52A2Q9HAB3 445 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 ADAMTS8Q9UP79 889 aa18.17■□□□□ 0.5
GTF3C2-204ENST00000423998 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
GTF3C2-204ENST00000423998 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
GTF3C2-204ENST00000423998 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
GTF3C2-204ENST00000423998 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
GTF3C2-204ENST00000423998 CALD1Q05682 793 aaKnown RBP18.14■□□□□ 0.49
GTF3C2-204ENST00000423998 STK32BQ9NY57 414 aa18.14■□□□□ 0.49
GTF3C2-204ENST00000423998 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.49
GTF3C2-204ENST00000423998 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.49
GTF3C2-204ENST00000423998 TNS1Q9HBL0 1735 aaKnown RBP18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 RIPK4P57078 832 aa18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 PALLDQ8WX93 1383 aa18.13■□□□□ 0.49
GTF3C2-204ENST00000423998 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
GTF3C2-204ENST00000423998 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
GTF3C2-204ENST00000423998 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
GTF3C2-204ENST00000423998 TAF7Q15545 349 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms