RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
CLCN3P1-201ENST00000423965 CHRNA2Q15822 529 aa12.05□□□□□ -0.48
CLCN3P1-201ENST00000423965 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
CLCN3P1-201ENST00000423965 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
CLCN3P1-201ENST00000423965 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
CLCN3P1-201ENST00000423965 RGPD8O14715 1765 aaPredicted RBP12.04□□□□□ -0.48
CLCN3P1-201ENST00000423965 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
CLCN3P1-201ENST00000423965 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
CLCN3P1-201ENST00000423965 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
CLCN3P1-201ENST00000423965 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
CLCN3P1-201ENST00000423965 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
CLCN3P1-201ENST00000423965 TMEM132EQ6IEE7 984 aa12.02□□□□□ -0.49
CLCN3P1-201ENST00000423965 ALS2Q96Q42 1657 aa12.02□□□□□ -0.49
CLCN3P1-201ENST00000423965 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
CLCN3P1-201ENST00000423965 ZC3H6P61129 1189 aaKnown RBP12.01□□□□□ -0.49
CLCN3P1-201ENST00000423965 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
CLCN3P1-201ENST00000423965 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
CLCN3P1-201ENST00000423965 POLD1P28340 1107 aa12□□□□□ -0.49
CLCN3P1-201ENST00000423965 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
CLCN3P1-201ENST00000423965 TMEM121BQ9BXQ6 578 aaPredicted RBP12□□□□□ -0.49
CLCN3P1-201ENST00000423965 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
CLCN3P1-201ENST00000423965 AATKQ6ZMQ8 1374 aa12□□□□□ -0.49
CLCN3P1-201ENST00000423965 BCL9O00512 1426 aa12□□□□□ -0.49
CLCN3P1-201ENST00000423965 PPP1R37O75864 691 aa11.99□□□□□ -0.49
CLCN3P1-201ENST00000423965 DDB1Q16531 1140 aa11.99□□□□□ -0.49
CLCN3P1-201ENST00000423965 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
CLCN3P1-201ENST00000423965 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
CLCN3P1-201ENST00000423965 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
CLCN3P1-201ENST00000423965 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
CLCN3P1-201ENST00000423965 PEAK1Q9H792 1746 aa11.98□□□□□ -0.49
CLCN3P1-201ENST00000423965 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLCN3P1-201ENST00000423965 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
CLCN3P1-201ENST00000423965 PPLO60437 1756 aa11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 IFT172Q9UG01 1749 aa11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 ATP7BP35670 1465 aa11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
CLCN3P1-201ENST00000423965 ADCY9O60503 1353 aa11.96□□□□□ -0.49
CLCN3P1-201ENST00000423965 KIF3CO14782 793 aa11.96□□□□□ -0.49
CLCN3P1-201ENST00000423965 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
CLCN3P1-201ENST00000423965 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
CLCN3P1-201ENST00000423965 ZNF526Q8TF50 670 aaPredicted RBP11.95□□□□□ -0.5
CLCN3P1-201ENST00000423965 CPDO75976 1380 aa11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 MARCH10Q8NA82 808 aaPredicted RBP11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
CLCN3P1-201ENST00000423965 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
CLCN3P1-201ENST00000423965 TOMM70O94826 608 aa11.93□□□□□ -0.5
CLCN3P1-201ENST00000423965 PCNTO95613 3336 aa11.92□□□□□ -0.5
CLCN3P1-201ENST00000423965 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
CLCN3P1-201ENST00000423965 POGKQ9P215 609 aa11.92□□□□□ -0.5
CLCN3P1-201ENST00000423965 WWC3Q9ULE0 1092 aa11.92□□□□□ -0.5
CLCN3P1-201ENST00000423965 CRB1P82279 1406 aa11.92□□□□□ -0.5
CLCN3P1-201ENST00000423965 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLCN3P1-201ENST00000423965 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
CLCN3P1-201ENST00000423965 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
CLCN3P1-201ENST00000423965 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CLCN3P1-201ENST00000423965 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
CLCN3P1-201ENST00000423965 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
CLCN3P1-201ENST00000423965 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
CLCN3P1-201ENST00000423965 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
CLCN3P1-201ENST00000423965 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
CLCN3P1-201ENST00000423965 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
CLCN3P1-201ENST00000423965 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
CLCN3P1-201ENST00000423965 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
CLCN3P1-201ENST00000423965 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
CLCN3P1-201ENST00000423965 COL24A1Q17RW2 1714 aa11.87□□□□□ -0.51
CLCN3P1-201ENST00000423965 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
CLCN3P1-201ENST00000423965 SNPHO15079 494 aa11.87□□□□□ -0.51
CLCN3P1-201ENST00000423965 EXOC5O00471 708 aa11.86□□□□□ -0.51
CLCN3P1-201ENST00000423965 GCP02774 474 aa11.86□□□□□ -0.51
CLCN3P1-201ENST00000423965 TOM1L2Q6ZVM7 507 aa11.86□□□□□ -0.51
CLCN3P1-201ENST00000423965 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
CLCN3P1-201ENST00000423965 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
CLCN3P1-201ENST00000423965 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
CLCN3P1-201ENST00000423965 HIRIP3Q9BW71 556 aaPredicted RBP11.85□□□□□ -0.51
CLCN3P1-201ENST00000423965 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
CLCN3P1-201ENST00000423965 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
CLCN3P1-201ENST00000423965 USP19O94966 1318 aa11.85□□□□□ -0.51
CLCN3P1-201ENST00000423965 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 PNPLA7Q6ZV29 1317 aa11.84□□□□□ -0.51
CLCN3P1-201ENST00000423965 ITGAEP38570 1179 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 CFAP70Q5T0N1 1121 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
CLCN3P1-201ENST00000423965 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
CLCN3P1-201ENST00000423965 FSTL1Q12841 308 aa11.82□□□□□ -0.52
CLCN3P1-201ENST00000423965 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CLCN3P1-201ENST00000423965 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
CLCN3P1-201ENST00000423965 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
CLCN3P1-201ENST00000423965 WDR90Q96KV7 1748 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms