RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 SOCS7O14512 581 aa29.13■■■□□ 2.25
SEC22C-207ENST00000423701 MARCH10Q8NA82 808 aaPredicted RBP29.13■■■□□ 2.25
SEC22C-207ENST00000423701 SULT6B1Q6IMI4 303 aa29.12■■■□□ 2.25
SEC22C-207ENST00000423701 ZCRB1Q8TBF4 217 aaKnown RBP29.1■■■□□ 2.25
SEC22C-207ENST00000423701 PLEKHG2Q9H7P9 1386 aa29.09■■■□□ 2.25
SEC22C-207ENST00000423701 U2SURPO15042 1029 aaKnown RBP29.09■■■□□ 2.25
SEC22C-207ENST00000423701 FAM196AQ6ZSG2 479 aa29.08■■■□□ 2.25
SEC22C-207ENST00000423701 HMOX1P09601 288 aa29.07■■■□□ 2.24
SEC22C-207ENST00000423701 DDX54Q8TDD1 881 aaKnown RBP29.06■■■□□ 2.24
SEC22C-207ENST00000423701 UPF1Q92900 1129 aaKnown RBP eCLIP29.06■■■□□ 2.243e-7■□□□□ 10.1
SEC22C-207ENST00000423701 NUDCQ9Y266 331 aa29.06■■■□□ 2.24
SEC22C-207ENST00000423701 BCL9O00512 1426 aa29.06■■■□□ 2.24
SEC22C-207ENST00000423701 PCDH11XQ9BZA7 1347 aa29.04■■■□□ 2.24
SEC22C-207ENST00000423701 PCDH11YQ9BZA8 1340 aa29.04■■■□□ 2.24
SEC22C-207ENST00000423701 ANP32CO43423 234 aa29.04■■■□□ 2.24
SEC22C-207ENST00000423701 SBF2Q86WG5 1849 aa29.03■■■□□ 2.24
SEC22C-207ENST00000423701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.03■■■□□ 2.24
SEC22C-207ENST00000423701 SPG7Q9UQ90 795 aa29.03■■■□□ 2.24
SEC22C-207ENST00000423701 TNS1Q9HBL0 1735 aaKnown RBP29.01■■■□□ 2.23
SEC22C-207ENST00000423701 U2AF1L5P0DN76 240 aaPredicted RBP29■■■□□ 2.23
SEC22C-207ENST00000423701 U2AF1Q01081 240 aaKnown RBP eCLIP29■■■□□ 2.23
SEC22C-207ENST00000423701 CYP27B1O15528 508 aa28.99■■■□□ 2.23
SEC22C-207ENST00000423701 TRIM37O94972 964 aa28.97■■■□□ 2.23
SEC22C-207ENST00000423701 DOT1LQ8TEK3 1739 aa28.97■■■□□ 2.23
SEC22C-207ENST00000423701 NHSQ6T4R5 1651 aa28.97■■■□□ 2.23
SEC22C-207ENST00000423701 AMOTQ4VCS5 1084 aa28.97■■■□□ 2.23
SEC22C-207ENST00000423701 PLEKHO1Q53GL0 409 aaPredicted RBP28.97■■■□□ 2.23
SEC22C-207ENST00000423701 RSPH6AQ9H0K4 717 aa28.97■■■□□ 2.23
SEC22C-207ENST00000423701 CCDC125Q86Z20 511 aa28.96■■■□□ 2.23
SEC22C-207ENST00000423701 PHKG2P15735 406 aa28.93■■■□□ 2.22
SEC22C-207ENST00000423701 PRKAR2BP31323 418 aa28.93■■■□□ 2.22
SEC22C-207ENST00000423701 TOGARAM1Q9Y4F4 1720 aa28.93■■■□□ 2.22
SEC22C-207ENST00000423701 ZNF530Q6P9A1 599 aaPredicted RBP28.92■■■□□ 2.22
SEC22C-207ENST00000423701 IFNL2Q8IZJ0 200 aa28.92■■■□□ 2.22
SEC22C-207ENST00000423701 ACSBG1Q96GR2 724 aa28.92■■■□□ 2.22
SEC22C-207ENST00000423701 FCHSD2O94868 740 aa28.91■■■□□ 2.22
SEC22C-207ENST00000423701 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
SEC22C-207ENST00000423701 PTF1AQ7RTS3 328 aa28.91■■■□□ 2.22
SEC22C-207ENST00000423701 KCNQ2O43526 872 aa28.9■■■□□ 2.22
SEC22C-207ENST00000423701 NKX1-1Q15270 411 aaPredicted RBP28.9■■■□□ 2.22
SEC22C-207ENST00000423701 CCDC184Q52MB2 194 aa28.89■■■□□ 2.22
SEC22C-207ENST00000423701 BCL11BQ9C0K0 894 aaPredicted RBP28.89■■■□□ 2.22
SEC22C-207ENST00000423701 MTHFSDQ2M296 383 aaKnown RBP28.88■■■□□ 2.21
SEC22C-207ENST00000423701 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
SEC22C-207ENST00000423701 PHACTR3Q96KR7 559 aa28.86■■■□□ 2.21
SEC22C-207ENST00000423701 BTAF1O14981 1849 aa28.85■■■□□ 2.21
SEC22C-207ENST00000423701 PRIM1P49642 420 aaKnown RBP28.85■■■□□ 2.21
SEC22C-207ENST00000423701 WDR43Q15061 677 aaKnown RBP eCLIP28.85■■■□□ 2.21
SEC22C-207ENST00000423701 DEFB132Q7Z7B7 95 aa28.85■■■□□ 2.21
SEC22C-207ENST00000423701 KDM6AO15550 1401 aaPredicted RBP28.84■■■□□ 2.21
SEC22C-207ENST00000423701 APBA3O96018 575 aa28.84■■■□□ 2.21
SEC22C-207ENST00000423701 SYTL4Q96C24 671 aaPredicted RBP28.84■■■□□ 2.21
SEC22C-207ENST00000423701 HSP90AB1P08238 724 aaKnown RBP28.83■■■□□ 2.21
SEC22C-207ENST00000423701 BAG6P46379 1132 aa28.83■■■□□ 2.21
SEC22C-207ENST00000423701 AKAP4Q5JQC9 854 aa28.83■■■□□ 2.21
SEC22C-207ENST00000423701 ITGB4P16144 1822 aa28.82■■■□□ 2.2
SEC22C-207ENST00000423701 KAT6BQ8WYB5 2073 aa28.82■■■□□ 2.2
SEC22C-207ENST00000423701 GAS2L2Q8NHY3 880 aa28.82■■■□□ 2.2
SEC22C-207ENST00000423701 PLEKHF1Q96S99 279 aa28.82■■■□□ 2.2
SEC22C-207ENST00000423701 DCAF5Q96JK2 942 aa28.81■■■□□ 2.2
SEC22C-207ENST00000423701 MRS2Q9HD23 443 aa28.81■■■□□ 2.2
SEC22C-207ENST00000423701 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
SEC22C-207ENST00000423701 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
SEC22C-207ENST00000423701 SCN11AQ9UI33 1791 aa28.8■■■□□ 2.2
SEC22C-207ENST00000423701 DIEXFQ68CQ4 756 aaKnown RBP28.79■■■□□ 2.2
SEC22C-207ENST00000423701 ADAMTS8Q9UP79 889 aa28.79■■■□□ 2.2
SEC22C-207ENST00000423701 ADAMTS7Q9UKP4 1686 aa28.79■■■□□ 2.2
SEC22C-207ENST00000423701 EN1Q05925 392 aaPredicted RBP28.78■■■□□ 2.2
SEC22C-207ENST00000423701 MPRIPQ6WCQ1 1025 aa28.78■■■□□ 2.2
SEC22C-207ENST00000423701 PNNQ9H307 717 aaKnown RBP28.78■■■□□ 2.2
SEC22C-207ENST00000423701 MAP3K5Q99683 1374 aa28.78■■■□□ 2.2
SEC22C-207ENST00000423701 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
SEC22C-207ENST00000423701 NEFMP07197 916 aa28.77■■■□□ 2.2
SEC22C-207ENST00000423701 MAPK8IP3Q9UPT6 1336 aa28.75■■■□□ 2.19
SEC22C-207ENST00000423701 ERVV-2B6SEH9 535 aa28.74■■■□□ 2.19
SEC22C-207ENST00000423701 PLSCR1O15162 318 aa28.74■■■□□ 2.19
SEC22C-207ENST00000423701 CAMKK2Q96RR4 588 aa28.74■■■□□ 2.19
SEC22C-207ENST00000423701 RREB1Q92766 1687 aa28.74■■■□□ 2.19
SEC22C-207ENST00000423701 GNAT3A8MTJ3 354 aa28.73■■■□□ 2.19
SEC22C-207ENST00000423701 EZH2Q15910 746 aaKnown RBP28.73■■■□□ 2.19
SEC22C-207ENST00000423701 MRC1P22897 1456 aa28.73■■■□□ 2.19
SEC22C-207ENST00000423701 CCDC146Q8IYE0 955 aa28.72■■■□□ 2.19
SEC22C-207ENST00000423701 PNISRQ8TF01 805 aaKnown RBP28.72■■■□□ 2.19
SEC22C-207ENST00000423701 PIGBQ92521 554 aa28.72■■■□□ 2.19
SEC22C-207ENST00000423701 LGR6Q9HBX8 967 aa28.72■■■□□ 2.19
SEC22C-207ENST00000423701 TMOD3Q9NYL9 352 aa28.72■■■□□ 2.19
SEC22C-207ENST00000423701 RNMTO43148 476 aaKnown RBP28.72■■■□□ 2.19
SEC22C-207ENST00000423701 DLG5Q8TDM6 1919 aa28.71■■■□□ 2.19
SEC22C-207ENST00000423701 CABP4P57796 275 aa28.69■■■□□ 2.18
SEC22C-207ENST00000423701 NFE2L2Q16236 605 aa28.69■■■□□ 2.18
SEC22C-207ENST00000423701 RUNDC1Q96C34 613 aa28.69■■■□□ 2.18
SEC22C-207ENST00000423701 LY75O60449 1722 aa28.69■■■□□ 2.18
SEC22C-207ENST00000423701 NUP188Q5SRE5 1749 aa28.68■■■□□ 2.18
SEC22C-207ENST00000423701 IL17REQ8NFR9 667 aa28.67■■■□□ 2.18
SEC22C-207ENST00000423701 SLC52A2Q9HAB3 445 aa28.66■■■□□ 2.18
SEC22C-207ENST00000423701 CEMIPQ8WUJ3 1361 aa28.66■■■□□ 2.18
SEC22C-207ENST00000423701 PROM2Q8N271 834 aa28.66■■■□□ 2.18
SEC22C-207ENST00000423701 NFATC2IPQ8NCF5 419 aa28.66■■■□□ 2.18
SEC22C-207ENST00000423701 PALLDQ8WX93 1383 aa28.66■■■□□ 2.18
SEC22C-207ENST00000423701 TXNRD1Q16881 649 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms