RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
CCDC78-203ENST00000423653 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
CCDC78-203ENST00000423653 ZCRB1Q8TBF4 217 aaKnown RBP23.2■■□□□ 1.3
CCDC78-203ENST00000423653 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
CCDC78-203ENST00000423653 PPP1R1BQ9UD71 204 aaPredicted RBP23.2■■□□□ 1.3
CCDC78-203ENST00000423653 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
CCDC78-203ENST00000423653 HSP90AB2PQ58FF8 381 aa23.18■■□□□ 1.3
CCDC78-203ENST00000423653 SLC15A2Q16348 729 aa23.17■■□□□ 1.3
CCDC78-203ENST00000423653 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
CCDC78-203ENST00000423653 EMILIN1Q9Y6C2 1016 aa23.17■■□□□ 1.3
CCDC78-203ENST00000423653 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-203ENST00000423653 PCDH11XQ9BZA7 1347 aa23.15■■□□□ 1.3
CCDC78-203ENST00000423653 PCDH11YQ9BZA8 1340 aa23.15■■□□□ 1.3
CCDC78-203ENST00000423653 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
CCDC78-203ENST00000423653 MAP2P11137 1827 aaKnown RBP23.13■■□□□ 1.29
CCDC78-203ENST00000423653 PPM1GO15355 546 aaPredicted RBP23.13■■□□□ 1.29
CCDC78-203ENST00000423653 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
CCDC78-203ENST00000423653 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
CCDC78-203ENST00000423653 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
CCDC78-203ENST00000423653 NSD2O96028 1365 aa23.13■■□□□ 1.29
CCDC78-203ENST00000423653 LY75O60449 1722 aa23.11■■□□□ 1.29
CCDC78-203ENST00000423653 PRIM1P49642 420 aaKnown RBP23.11■■□□□ 1.29
CCDC78-203ENST00000423653 WASHC2AQ641Q2 1341 aa23.1■■□□□ 1.29
CCDC78-203ENST00000423653 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
CCDC78-203ENST00000423653 QSER1Q2KHR3 1735 aa23.09■■□□□ 1.29
CCDC78-203ENST00000423653 PDGFDQ9GZP0 370 aaPredicted RBP23.09■■□□□ 1.29
CCDC78-203ENST00000423653 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
CCDC78-203ENST00000423653 PANK3Q9H999 370 aa23.07■■□□□ 1.28
CCDC78-203ENST00000423653 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
CCDC78-203ENST00000423653 POLKQ9UBT6 870 aa23.06■■□□□ 1.28
CCDC78-203ENST00000423653 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
CCDC78-203ENST00000423653 TNNT2P45379 298 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-203ENST00000423653 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
CCDC78-203ENST00000423653 DCAF8L1A6NGE4 600 aa23.03■■□□□ 1.28
CCDC78-203ENST00000423653 PTGER2P43116 358 aa23.03■■□□□ 1.28
CCDC78-203ENST00000423653 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
CCDC78-203ENST00000423653 ATF5Q9Y2D1 282 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-203ENST00000423653 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
CCDC78-203ENST00000423653 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
CCDC78-203ENST00000423653 AKT1S1Q96B36 256 aa23.02■■□□□ 1.28
CCDC78-203ENST00000423653 CCNL1Q9UK58 526 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-203ENST00000423653 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
CCDC78-203ENST00000423653 CYP27B1O15528 508 aa23.01■■□□□ 1.27
CCDC78-203ENST00000423653 EYA1Q99502 592 aa23.01■■□□□ 1.27
CCDC78-203ENST00000423653 C5P01031 1676 aa23■■□□□ 1.27
CCDC78-203ENST00000423653 ITGB4P16144 1822 aa22.99■■□□□ 1.27
CCDC78-203ENST00000423653 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
CCDC78-203ENST00000423653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCDC78-203ENST00000423653 TFCP2L1Q9NZI6 479 aa22.99■■□□□ 1.27
CCDC78-203ENST00000423653 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
CCDC78-203ENST00000423653 SLC16A10Q8TF71 515 aa22.98■■□□□ 1.27
CCDC78-203ENST00000423653 PALLDQ8WX93 1383 aa22.98■■□□□ 1.27
CCDC78-203ENST00000423653 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
CCDC78-203ENST00000423653 KCNQ4P56696 695 aa22.96■■□□□ 1.27
CCDC78-203ENST00000423653 SGIP1Q9BQI5 828 aa22.96■■□□□ 1.27
CCDC78-203ENST00000423653 PNPLA7Q6ZV29 1317 aa22.96■■□□□ 1.27
CCDC78-203ENST00000423653 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
CCDC78-203ENST00000423653 NKX1-1Q15270 411 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-203ENST00000423653 KIF7Q2M1P5 1343 aa22.95■■□□□ 1.26
CCDC78-203ENST00000423653 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
CCDC78-203ENST00000423653 SMARCC1Q92922 1105 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-203ENST00000423653 COL24A1Q17RW2 1714 aa22.94■■□□□ 1.26
CCDC78-203ENST00000423653 ARXQ96QS3 562 aa22.93■■□□□ 1.26
CCDC78-203ENST00000423653 FHDC1Q9C0D6 1143 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-203ENST00000423653 TAF1LQ8IZX4 1826 aa22.93■■□□□ 1.26
CCDC78-203ENST00000423653 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
CCDC78-203ENST00000423653 POLD1P28340 1107 aa22.92■■□□□ 1.26
CCDC78-203ENST00000423653 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
CCDC78-203ENST00000423653 PHKG2P15735 406 aa22.9■■□□□ 1.26
CCDC78-203ENST00000423653 TMOD3Q9NYL9 352 aa22.9■■□□□ 1.26
CCDC78-203ENST00000423653 C4BP0C0L5 1744 aa22.89■■□□□ 1.26
CCDC78-203ENST00000423653 SYT17Q9BSW7 474 aa22.89■■□□□ 1.25
CCDC78-203ENST00000423653 AMER1Q5JTC6 1135 aaPredicted RBP22.88■■□□□ 1.25
CCDC78-203ENST00000423653 PIGBQ92521 554 aa22.88■■□□□ 1.25
CCDC78-203ENST00000423653 MSH5O43196 834 aa22.86■■□□□ 1.25
CCDC78-203ENST00000423653 HSP90AB1P08238 724 aaKnown RBP22.86■■□□□ 1.25
CCDC78-203ENST00000423653 YY1P25490 414 aa22.86■■□□□ 1.25
CCDC78-203ENST00000423653 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
CCDC78-203ENST00000423653 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
CCDC78-203ENST00000423653 FLAD1Q8NFF5 587 aa22.85■■□□□ 1.25
CCDC78-203ENST00000423653 AK7Q96M32 723 aa22.84■■□□□ 1.25
CCDC78-203ENST00000423653 KDRP35968 1356 aa22.83■■□□□ 1.25
CCDC78-203ENST00000423653 LOC102724428A0A0B4J2F2 783 aa22.82■■□□□ 1.24
CCDC78-203ENST00000423653 SIK1P57059 783 aa22.82■■□□□ 1.24
CCDC78-203ENST00000423653 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
CCDC78-203ENST00000423653 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
CCDC78-203ENST00000423653 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
CCDC78-203ENST00000423653 UBR3Q6ZT12 1888 aa22.81■■□□□ 1.24
CCDC78-203ENST00000423653 KLHL34Q8N239 644 aa22.81■■□□□ 1.24
CCDC78-203ENST00000423653 ERVV-2B6SEH9 535 aa22.8■■□□□ 1.24
CCDC78-203ENST00000423653 C1orf141Q5JVX7 400 aa22.8■■□□□ 1.24
CCDC78-203ENST00000423653 ZNF831Q5JPB2 1677 aa22.79■■□□□ 1.24
CCDC78-203ENST00000423653 SULT6B1Q6IMI4 303 aa22.79■■□□□ 1.24
CCDC78-203ENST00000423653 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
CCDC78-203ENST00000423653 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
CCDC78-203ENST00000423653 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
CCDC78-203ENST00000423653 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
CCDC78-203ENST00000423653 IL13P35225 146 aa22.78■■□□□ 1.24
CCDC78-203ENST00000423653 PER1O15534 1290 aaPredicted RBP22.77■■□□□ 1.24
CCDC78-203ENST00000423653 SSFA2P28290 1259 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms