RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 NEBLO76041 1014 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
TNC-203ENST00000423613 SEPT6Q14141 434 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
TNC-203ENST00000423613 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
TNC-203ENST00000423613 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 CFAP57Q96MR6 1250 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
TNC-203ENST00000423613 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 TXNDC2Q86VQ3 553 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
TNC-203ENST00000423613 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
TNC-203ENST00000423613 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.32
TNC-203ENST00000423613 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.32
TNC-203ENST00000423613 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.32
TNC-203ENST00000423613 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 BCAR3O75815 825 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 STAMBPO95630 424 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
TNC-203ENST00000423613 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 GCC1Q96CN9 775 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 CPSF2Q9P2I0 782 aaKnown RBP13.02□□□□□ -0.33
TNC-203ENST00000423613 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
TNC-203ENST00000423613 SARNPP82979 210 aaKnown RBP13.02□□□□□ -0.33
TNC-203ENST00000423613 TANGO6Q9C0B7 1094 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 TMCO5BA8MYB1 307 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
TNC-203ENST00000423613 CBFA2T2O43439 604 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 MCM2P49736 904 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 PTPN14Q15678 1187 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 KIAA1328Q86T90 577 aa13.01□□□□□ -0.33
TNC-203ENST00000423613 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
TNC-203ENST00000423613 GNAI2P04899 355 aa13□□□□□ -0.33
TNC-203ENST00000423613 HIP1O00291 1037 aa13□□□□□ -0.33
TNC-203ENST00000423613 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
TNC-203ENST00000423613 PDE3AQ14432 1141 aa13□□□□□ -0.33
TNC-203ENST00000423613 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
TNC-203ENST00000423613 AKNAQ7Z591 1439 aa13□□□□□ -0.33
TNC-203ENST00000423613 TXLNAP40222 546 aa13□□□□□ -0.33
TNC-203ENST00000423613 PDCP20941 246 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 NBPF1Q3BBV0 1214 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 MAP9Q49MG5 647 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 TXLNBQ8N3L3 684 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 LUC7LQ9NQ29 371 aaKnown RBP12.99□□□□□ -0.33
TNC-203ENST00000423613 CCDC175P0C221 793 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 RSPH14Q9UHP6 348 aa12.99□□□□□ -0.33
TNC-203ENST00000423613 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 ZNF396Q96N95 335 aaPredicted RBP12.98□□□□□ -0.33
TNC-203ENST00000423613 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
TNC-203ENST00000423613 STK38Q15208 465 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
TNC-203ENST00000423613 ZNF76P36508 570 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
TNC-203ENST00000423613 RAI14Q9P0K7 980 aa12.98□□□□□ -0.33
TNC-203ENST00000423613 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
TNC-203ENST00000423613 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 TAF4BQ92750 862 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
TNC-203ENST00000423613 SYCE3A1L190 88 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 MYL6BP14649 208 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 STK3Q13188 491 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 ARHGAP29Q52LW3 1261 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
TNC-203ENST00000423613 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
TNC-203ENST00000423613 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
TNC-203ENST00000423613 AFAP1Q8N556 730 aa12.96□□□□□ -0.33
TNC-203ENST00000423613 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
TNC-203ENST00000423613 LUZP1Q86V48 1076 aa12.96□□□□□ -0.33
TNC-203ENST00000423613 DACH1Q9UI36 760 aa12.96□□□□□ -0.33
TNC-203ENST00000423613 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNC-203ENST00000423613 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.34
TNC-203ENST00000423613 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.34
TNC-203ENST00000423613 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.34
TNC-203ENST00000423613 GRM1Q13255 1194 aa12.96□□□□□ -0.34
TNC-203ENST00000423613 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.34
TNC-203ENST00000423613 KIF18AQ8NI77 898 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms