RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PROM2Q8N271 834 aa21.36■■□□□ 1.01
SPC24-201ENST00000423327 POLKQ9UBT6 870 aa21.35■■□□□ 1.01
SPC24-201ENST00000423327 ANO8Q9HCE9 1232 aaPredicted RBP21.33■■□□□ 1.01
SPC24-201ENST00000423327 WASHC2AQ641Q2 1341 aa21.32■■□□□ 1
SPC24-201ENST00000423327 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
SPC24-201ENST00000423327 DDX54Q8TDD1 881 aaKnown RBP21.32■■□□□ 1
SPC24-201ENST00000423327 NSD2O96028 1365 aa21.32■■□□□ 1
SPC24-201ENST00000423327 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
SPC24-201ENST00000423327 PAPPAQ13219 1627 aa21.31■■□□□ 1
SPC24-201ENST00000423327 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
SPC24-201ENST00000423327 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
SPC24-201ENST00000423327 ZCRB1Q8TBF4 217 aaKnown RBP21.3■■□□□ 1
SPC24-201ENST00000423327 CASZ1Q86V15 1759 aa21.28■■□□□ 1
SPC24-201ENST00000423327 TXNRD1Q16881 649 aa21.28■■□□□ 1
SPC24-201ENST00000423327 TOGARAM1Q9Y4F4 1720 aa21.27■■□□□ 1
SPC24-201ENST00000423327 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
SPC24-201ENST00000423327 RAPGEF4Q8WZA2 1011 aa21.27■■□□□ 1
SPC24-201ENST00000423327 EYA1Q99502 592 aa21.26■□□□□ 0.99
SPC24-201ENST00000423327 TATP17735 454 aaPredicted RBP21.25■□□□□ 0.99
SPC24-201ENST00000423327 EIF4A2Q14240 407 aaKnown RBP21.25■□□□□ 0.99
SPC24-201ENST00000423327 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
SPC24-201ENST00000423327 PER1O15534 1290 aaPredicted RBP21.23■□□□□ 0.99
SPC24-201ENST00000423327 KNSTRNQ9Y448 316 aa21.23■□□□□ 0.99
SPC24-201ENST00000423327 LY75O60449 1722 aa21.23■□□□□ 0.99
SPC24-201ENST00000423327 CYP27B1O15528 508 aa21.22■□□□□ 0.99
SPC24-201ENST00000423327 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
SPC24-201ENST00000423327 PCDH11XQ9BZA7 1347 aa21.22■□□□□ 0.99
SPC24-201ENST00000423327 PCDH11YQ9BZA8 1340 aa21.22■□□□□ 0.99
SPC24-201ENST00000423327 MORC1Q86VD1 984 aa21.21■□□□□ 0.99
SPC24-201ENST00000423327 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
SPC24-201ENST00000423327 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
SPC24-201ENST00000423327 IGSF1Q8N6C5 1336 aa21.2■□□□□ 0.98
SPC24-201ENST00000423327 ITGB4P16144 1822 aa21.19■□□□□ 0.98
SPC24-201ENST00000423327 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
SPC24-201ENST00000423327 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
SPC24-201ENST00000423327 TUBGCP6Q96RT7 1819 aa21.17■□□□□ 0.98
SPC24-201ENST00000423327 ZNF827Q17R98 1081 aa21.16■□□□□ 0.98
SPC24-201ENST00000423327 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
SPC24-201ENST00000423327 KCNQ4P56696 695 aa21.14■□□□□ 0.97
SPC24-201ENST00000423327 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
SPC24-201ENST00000423327 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
SPC24-201ENST00000423327 PLEKHG2Q9H7P9 1386 aa21.12■□□□□ 0.97
SPC24-201ENST00000423327 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
SPC24-201ENST00000423327 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
SPC24-201ENST00000423327 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
SPC24-201ENST00000423327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
SPC24-201ENST00000423327 IL13P35225 146 aa21.11■□□□□ 0.97
SPC24-201ENST00000423327 SLC27A3Q5K4L6 730 aa21.11■□□□□ 0.97
SPC24-201ENST00000423327 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
SPC24-201ENST00000423327 SPG7Q9UQ90 795 aa21.11■□□□□ 0.97
SPC24-201ENST00000423327 PHKG2P15735 406 aa21.1■□□□□ 0.97
SPC24-201ENST00000423327 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
SPC24-201ENST00000423327 SPON1Q9HCB6 807 aa21.09■□□□□ 0.97
SPC24-201ENST00000423327 KDRP35968 1356 aa21.09■□□□□ 0.97
SPC24-201ENST00000423327 C5P01031 1676 aa21.09■□□□□ 0.97
SPC24-201ENST00000423327 COL3A1P02461 1466 aaPredicted RBP21.08■□□□□ 0.97
SPC24-201ENST00000423327 ZBTB7AO95365 584 aa21.08■□□□□ 0.97
SPC24-201ENST00000423327 MTHFSP49914 203 aa21.08■□□□□ 0.97
SPC24-201ENST00000423327 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
SPC24-201ENST00000423327 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
SPC24-201ENST00000423327 PTGER2P43116 358 aa21.06■□□□□ 0.96
SPC24-201ENST00000423327 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
SPC24-201ENST00000423327 PIGBQ92521 554 aa21.06■□□□□ 0.96
SPC24-201ENST00000423327 CCNL1Q9UK58 526 aaPredicted RBP21.06■□□□□ 0.96
SPC24-201ENST00000423327 KDM6AO15550 1401 aaPredicted RBP21.05■□□□□ 0.96
SPC24-201ENST00000423327 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
SPC24-201ENST00000423327 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
SPC24-201ENST00000423327 SGIP1Q9BQI5 828 aa21.04■□□□□ 0.96
SPC24-201ENST00000423327 COL24A1Q17RW2 1714 aa21.04■□□□□ 0.96
SPC24-201ENST00000423327 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
SPC24-201ENST00000423327 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
SPC24-201ENST00000423327 MTFR1LQ9H019 292 aa21.01■□□□□ 0.95
SPC24-201ENST00000423327 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
SPC24-201ENST00000423327 PLEKHO1Q53GL0 409 aaPredicted RBP21■□□□□ 0.95
SPC24-201ENST00000423327 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
SPC24-201ENST00000423327 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
SPC24-201ENST00000423327 ASAP1Q9ULH1 1129 aa20.99■□□□□ 0.95
SPC24-201ENST00000423327 SCN11AQ9UI33 1791 aa20.98■□□□□ 0.95
SPC24-201ENST00000423327 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
SPC24-201ENST00000423327 UBR3Q6ZT12 1888 aa20.97■□□□□ 0.95
SPC24-201ENST00000423327 HMOX1P09601 288 aa20.97■□□□□ 0.95
SPC24-201ENST00000423327 SMARCC1Q92922 1105 aaPredicted RBP20.97■□□□□ 0.95
SPC24-201ENST00000423327 TFCP2L1Q9NZI6 479 aa20.97■□□□□ 0.95
SPC24-201ENST00000423327 PPP1R1BQ9UD71 204 aaPredicted RBP20.97■□□□□ 0.95
SPC24-201ENST00000423327 DIAPH1O60610 1272 aaKnown RBP20.96■□□□□ 0.95
SPC24-201ENST00000423327 AMIGO3Q86WK7 504 aa20.96■□□□□ 0.95
SPC24-201ENST00000423327 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
SPC24-201ENST00000423327 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
SPC24-201ENST00000423327 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
SPC24-201ENST00000423327 ADAMTS7Q9UKP4 1686 aa20.95■□□□□ 0.94
SPC24-201ENST00000423327 LOC102724428A0A0B4J2F2 783 aa20.94■□□□□ 0.94
SPC24-201ENST00000423327 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
SPC24-201ENST00000423327 SIK1P57059 783 aa20.94■□□□□ 0.94
SPC24-201ENST00000423327 COL23A1Q86Y22 540 aaPredicted RBP20.94■□□□□ 0.94
SPC24-201ENST00000423327 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
SPC24-201ENST00000423327 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
SPC24-201ENST00000423327 ITPK1Q13572 414 aa20.93■□□□□ 0.94
SPC24-201ENST00000423327 LINC00116Q8NCU8 138 aa20.93■□□□□ 0.94
SPC24-201ENST00000423327 MRC1P22897 1456 aa20.93■□□□□ 0.94
SPC24-201ENST00000423327 COL5A3P25940 1745 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms