RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 ATP7AQ04656 1500 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 AP1G2O75843 785 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 HNRNPMP52272 730 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 THAP11Q96EK4 314 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 ZBTB3Q9H5J0 574 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 V9GY48 417 aaPredicted RBP7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 INO80Q9ULG1 1556 aaPredicted RBP7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 CEP170BQ9Y4F5 1589 aaPredicted RBP7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 MYO3AQ8NEV4 1616 aa7.49□□□□□ -1.21
CDC42EP3-202ENST00000422687 FDX1P10109 184 aa7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 GJD4Q96KN9 370 aaPredicted RBP7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 PCDHGC3Q9UN70 934 aa7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 A2ML1A8K2U0 1454 aa7.48□□□□□ -1.21
CDC42EP3-202ENST00000422687 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 GPR37L1O60883 481 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 PDIA4P13667 645 aaKnown RBP7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 ANKLE1Q8NAG6 615 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 SPSB2Q99619 263 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 SLC27A5Q9Y2P5 690 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 MBD5Q9P267 1494 aa7.47□□□□□ -1.21
CDC42EP3-202ENST00000422687 RTEL1-TNFRSF6BF6WH68 1400 aa7.46□□□□□ -1.21
CDC42EP3-202ENST00000422687 NUTM2BA6NNL0 878 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 NUTM2EB1AL46 878 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 S1PR4O95977 384 aa7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 NUTM2DQ5VT03 806 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 NUTM2AQ8IVF1 878 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 PRKD2Q9BZL6 878 aa7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 SLC6A16Q9GZN6 736 aa7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 PRM3Q9NNZ6 103 aa7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 CFDP1Q9UEE9 299 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 CLTCQ00610 1675 aaKnown RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 DHX29Q7Z478 1369 aaKnown RBP7.46□□□□□ -1.22
CDC42EP3-202ENST00000422687 DNMT1P26358 1616 aaKnown RBP7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 SUPT6HQ7KZ85 1726 aaKnown RBP7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 ABL2P42684 1182 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 IRF5Q13568 498 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 GGT6Q6P531 493 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 HLA-CQ95604 372 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 TRAIPQ9BWF2 469 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 CPS1P31327 1500 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 FAM135AQ9P2D6 1515 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 NEURL4Q96JN8 1562 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 CCNB3Q8WWL7 1395 aa7.45□□□□□ -1.22
CDC42EP3-202ENST00000422687 SHANK2Q9UPX8 1470 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 POM121CA8CG34 1229 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 HSPA1LP34931 641 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 GUCA2AQ02747 115 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 Q3C1V9 767 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 MSS51Q4VC12 460 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
CDC42EP3-202ENST00000422687 MED14O60244 1454 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 PZPP20742 1482 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 MED1Q15648 1581 aaPredicted RBP7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 ALKQ9UM73 1620 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 TOM1O60784 492 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 MTMR2Q13614 643 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 GLMNQ92990 594 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 ZNF644Q9H582 1327 aaPredicted RBP7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 TNRQ92752 1358 aa7.43□□□□□ -1.22
CDC42EP3-202ENST00000422687 VWDEQ8N2E2 1590 aa7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 ADGBQ8N7X0 1667 aa7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 RNF19BQ6ZMZ0 732 aa7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 EMID1Q96A84 441 aaPredicted RBP7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 CALR3Q96L12 384 aaKnown RBP7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 CEP162Q5TB80 1403 aa7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 TIAM1Q13009 1591 aa7.42□□□□□ -1.22
CDC42EP3-202ENST00000422687 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 PPP1R15AO75807 674 aaPredicted RBP7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 MTUS2Q5JR59 1369 aa7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 MIA2Q96PC5 1412 aa7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 NLRP1Q9C000 1473 aa7.41□□□□□ -1.22
CDC42EP3-202ENST00000422687 LAPTM4AQ15012 233 aa7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 ANKLE2Q86XL3 938 aa7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 THEMISQ8N1K5 641 aaPredicted RBP7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 ADAMTS19Q8TE59 1207 aa7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 KDM5DQ9BY66 1539 aa7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
CDC42EP3-202ENST00000422687 NPHP4O75161 1426 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 KIF3BO15066 747 aa7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 PIP4K2BP78356 416 aa7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 WASHC4Q2M389 1173 aa7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 RETREG2Q8NC44 543 aa7.39□□□□□ -1.23
CDC42EP3-202ENST00000422687 POLR1AO95602 1720 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-202ENST00000422687 EHBP1L1Q8N3D4 1523 aa7.38□□□□□ -1.23
CDC42EP3-202ENST00000422687 CCDC141Q6ZP82 1450 aa7.38□□□□□ -1.23
CDC42EP3-202ENST00000422687 SLC19A1P41440 591 aa7.38□□□□□ -1.23
CDC42EP3-202ENST00000422687 MMP16P51512 607 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms