RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 PRPHP41219 470 aa10.83□□□□□ -0.68
CD109-202ENST00000422508 FAM135AQ9P2D6 1515 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 K7ELQ4 463 aaPredicted RBP10.82□□□□□ -0.68
CD109-202ENST00000422508 MAP3K11Q16584 847 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.82□□□□□ -0.68
CD109-202ENST00000422508 PNISRQ8TF01 805 aaKnown RBP10.82□□□□□ -0.68
CD109-202ENST00000422508 TSNARE1Q96NA8 513 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 UPF3BQ9BZI7 483 aaKnown RBP10.82□□□□□ -0.68
CD109-202ENST00000422508 GNAI2P04899 355 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 CCDC158Q5M9N0 1113 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
CD109-202ENST00000422508 TTC21AQ8NDW8 1320 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 GGT6Q6P531 493 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 FSD1Q9BTV5 496 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 PTPN14Q15678 1187 aa10.82□□□□□ -0.68
CD109-202ENST00000422508 AIMP1Q12904 312 aaKnown RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 PRIMPOLQ96LW4 560 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 ZWINTO95229 277 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 RIPK4P57078 832 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 KIF14Q15058 1648 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 CASTP20810 708 aaKnown RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 ATAD2Q6PL18 1390 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 CKAP4Q07065 602 aaKnown RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 WASHC4Q2M389 1173 aa10.81□□□□□ -0.68
CD109-202ENST00000422508 DNAJC21Q5F1R6 531 aaKnown RBP10.81□□□□□ -0.68
CD109-202ENST00000422508 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 PAFAH1B1P43034 410 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
CD109-202ENST00000422508 CCDC183Q5T5S1 534 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 FSD2A1L4K1 749 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 HSPA4P34932 840 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 KANK3Q6NY19 840 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 SH2B1Q9NRF2 756 aaPredicted RBP10.8□□□□□ -0.68
CD109-202ENST00000422508 CCDC6Q16204 474 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 ANKRD30BQ9BXX2 1392 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 KIF3CO14782 793 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
CD109-202ENST00000422508 SENP3Q9H4L4 574 aaPredicted RBP10.8□□□□□ -0.68
CD109-202ENST00000422508 ESPNB1AK53 854 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 SPATA32Q96LK8 384 aa10.8□□□□□ -0.68
CD109-202ENST00000422508 TIGD1Q96MW7 591 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 JAKMIP2Q96AA8 810 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 ANO10Q9NW15 660 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 STXBP4Q6ZWJ1 553 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 LRRC27Q9C0I9 530 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 PABPN1LA6NDY0 278 aaKnown RBP10.79□□□□□ -0.68
CD109-202ENST00000422508 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 RASAL2Q9UJF2 1139 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 EIF5P55010 431 aaKnown RBP10.79□□□□□ -0.68
CD109-202ENST00000422508 IKBKGQ9Y6K9 419 aa10.79□□□□□ -0.68
CD109-202ENST00000422508 SRRTQ9BXP5 876 aaKnown RBP10.79□□□□□ -0.68
CD109-202ENST00000422508 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
CD109-202ENST00000422508 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
CD109-202ENST00000422508 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
CD109-202ENST00000422508 FMNL2Q96PY5 1086 aa10.78□□□□□ -0.68
CD109-202ENST00000422508 TANGO6Q9C0B7 1094 aa10.78□□□□□ -0.68
CD109-202ENST00000422508 DHX37Q8IY37 1157 aaKnown RBP10.78□□□□□ -0.68
CD109-202ENST00000422508 SEC63Q9UGP8 760 aaKnown RBP10.78□□□□□ -0.68
CD109-202ENST00000422508 U3KPZ7 1027 aaPredicted RBP10.78□□□□□ -0.68
CD109-202ENST00000422508 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
CD109-202ENST00000422508 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.68
CD109-202ENST00000422508 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.68
CD109-202ENST00000422508 CCDC110Q8TBZ0 833 aa10.77□□□□□ -0.68
CD109-202ENST00000422508 USP37Q86T82 979 aa10.77□□□□□ -0.68
CD109-202ENST00000422508 CCDC50Q8IVM0 306 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 FHOD3Q2V2M9 1422 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 BRPF1P55201 1214 aaPredicted RBP10.77□□□□□ -0.69
CD109-202ENST00000422508 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
CD109-202ENST00000422508 NEK4P51957 841 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 BMS1Q14692 1282 aaKnown RBP10.77□□□□□ -0.69
CD109-202ENST00000422508 CCDC27Q2M243 656 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 KIF1BO60333 1816 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 KIF4AO95239 1232 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 SH2D4BQ5SQS7 431 aa10.77□□□□□ -0.69
CD109-202ENST00000422508 GSTTP1A0A1W2PQM5 241 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 NDC80O14777 642 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 RAPGEF4Q8WZA2 1011 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 AMPD3Q01432 767 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 CPSF2Q9P2I0 782 aaKnown RBP10.76□□□□□ -0.69
CD109-202ENST00000422508 SSX2IPQ9Y2D8 614 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 YEATS4O95619 227 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 PSME1Q06323 249 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 318.3 ms