RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 MEGF6O75095 1541 aa19■□□□□ 0.63
CNBP-201ENST00000422453 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
CNBP-201ENST00000422453 KAT6BQ8WYB5 2073 aa19■□□□□ 0.63
CNBP-201ENST00000422453 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
CNBP-201ENST00000422453 EIF4A2Q14240 407 aaKnown RBP18.98■□□□□ 0.63
CNBP-201ENST00000422453 EYA1Q99502 592 aa18.98■□□□□ 0.63
CNBP-201ENST00000422453 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
CNBP-201ENST00000422453 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
CNBP-201ENST00000422453 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
CNBP-201ENST00000422453 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
CNBP-201ENST00000422453 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
CNBP-201ENST00000422453 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
CNBP-201ENST00000422453 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
CNBP-201ENST00000422453 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
CNBP-201ENST00000422453 RREB1Q92766 1687 aa18.94■□□□□ 0.62
CNBP-201ENST00000422453 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
CNBP-201ENST00000422453 SPG7Q9UQ90 795 aa18.94■□□□□ 0.62
CNBP-201ENST00000422453 RGPD3A6NKT7 1758 aaPredicted RBP18.93■□□□□ 0.62
CNBP-201ENST00000422453 RGPD4Q7Z3J3 1758 aa18.93■□□□□ 0.62
CNBP-201ENST00000422453 TXNRD1Q16881 649 aa18.93■□□□□ 0.62
CNBP-201ENST00000422453 PROM2Q8N271 834 aa18.92■□□□□ 0.62
CNBP-201ENST00000422453 NUP188Q5SRE5 1749 aa18.92■□□□□ 0.62
CNBP-201ENST00000422453 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
CNBP-201ENST00000422453 MTHFSP49914 203 aa18.9■□□□□ 0.62
CNBP-201ENST00000422453 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
CNBP-201ENST00000422453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■□□□□ 10.7
CNBP-201ENST00000422453 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
CNBP-201ENST00000422453 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
CNBP-201ENST00000422453 CYP27B1O15528 508 aa18.89■□□□□ 0.61
CNBP-201ENST00000422453 BTAF1O14981 1849 aa18.88■□□□□ 0.61
CNBP-201ENST00000422453 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
CNBP-201ENST00000422453 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
CNBP-201ENST00000422453 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
CNBP-201ENST00000422453 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
CNBP-201ENST00000422453 IL13P35225 146 aa18.85■□□□□ 0.61
CNBP-201ENST00000422453 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
CNBP-201ENST00000422453 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
CNBP-201ENST00000422453 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
CNBP-201ENST00000422453 MPRIPQ6WCQ1 1025 aa18.85■□□□□ 0.61
CNBP-201ENST00000422453 PKD1L3Q7Z443 1732 aa18.84■□□□□ 0.61
CNBP-201ENST00000422453 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
CNBP-201ENST00000422453 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.61
CNBP-201ENST00000422453 SLC15A2Q16348 729 aa18.83■□□□□ 0.61
CNBP-201ENST00000422453 AMOTQ4VCS5 1084 aa18.83■□□□□ 0.61
CNBP-201ENST00000422453 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
CNBP-201ENST00000422453 PHKG2P15735 406 aa18.82■□□□□ 0.6
CNBP-201ENST00000422453 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
CNBP-201ENST00000422453 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
CNBP-201ENST00000422453 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
CNBP-201ENST00000422453 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
CNBP-201ENST00000422453 CCNL1Q9UK58 526 aaPredicted RBP18.8■□□□□ 0.6
CNBP-201ENST00000422453 LRP5O75197 1615 aa18.8■□□□□ 0.6
CNBP-201ENST00000422453 C1orf141Q5JVX7 400 aa18.79■□□□□ 0.6
CNBP-201ENST00000422453 SPON1Q9HCB6 807 aa18.79■□□□□ 0.6
CNBP-201ENST00000422453 TMOD3Q9NYL9 352 aa18.79■□□□□ 0.6
CNBP-201ENST00000422453 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
CNBP-201ENST00000422453 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
CNBP-201ENST00000422453 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
CNBP-201ENST00000422453 KCNQ4P56696 695 aa18.78■□□□□ 0.6
CNBP-201ENST00000422453 PIGBQ92521 554 aa18.78■□□□□ 0.6
CNBP-201ENST00000422453 KDRP35968 1356 aa18.78■□□□□ 0.6
CNBP-201ENST00000422453 HMOX1P09601 288 aa18.77■□□□□ 0.6
CNBP-201ENST00000422453 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
CNBP-201ENST00000422453 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
CNBP-201ENST00000422453 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
CNBP-201ENST00000422453 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
CNBP-201ENST00000422453 PPP1R1BQ9UD71 204 aaPredicted RBP18.76■□□□□ 0.59
CNBP-201ENST00000422453 ZBTB7AO95365 584 aa18.75■□□□□ 0.59
CNBP-201ENST00000422453 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
CNBP-201ENST00000422453 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
CNBP-201ENST00000422453 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
CNBP-201ENST00000422453 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
CNBP-201ENST00000422453 PDGFDQ9GZP0 370 aaPredicted RBP18.74■□□□□ 0.59
CNBP-201ENST00000422453 LY75O60449 1722 aa18.74■□□□□ 0.59
CNBP-201ENST00000422453 ITGB4P16144 1822 aa18.74■□□□□ 0.59
CNBP-201ENST00000422453 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
CNBP-201ENST00000422453 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
CNBP-201ENST00000422453 CABP4P57796 275 aa18.73■□□□□ 0.59
CNBP-201ENST00000422453 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
CNBP-201ENST00000422453 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
CNBP-201ENST00000422453 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
CNBP-201ENST00000422453 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
CNBP-201ENST00000422453 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
CNBP-201ENST00000422453 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
CNBP-201ENST00000422453 CASZ1Q86V15 1759 aa18.69■□□□□ 0.58
CNBP-201ENST00000422453 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
CNBP-201ENST00000422453 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
CNBP-201ENST00000422453 SIK1P57059 783 aa18.69■□□□□ 0.58
CNBP-201ENST00000422453 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
CNBP-201ENST00000422453 MSH5O43196 834 aa18.68■□□□□ 0.58
CNBP-201ENST00000422453 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
CNBP-201ENST00000422453 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
CNBP-201ENST00000422453 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
CNBP-201ENST00000422453 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
CNBP-201ENST00000422453 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
CNBP-201ENST00000422453 SLC16A10Q8TF71 515 aa18.66■□□□□ 0.58
CNBP-201ENST00000422453 AK7Q96M32 723 aa18.66■□□□□ 0.58
CNBP-201ENST00000422453 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
CNBP-201ENST00000422453 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
CNBP-201ENST00000422453 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.584e-13■■■■□ 26.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms