RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
MDC1-204ENST00000422266 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
MDC1-204ENST00000422266 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
MDC1-204ENST00000422266 NUP188Q5SRE5 1749 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 KCNQ2O43526 872 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.522e-7■□□□□ 8.6
MDC1-204ENST00000422266 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 KAT6BQ8WYB5 2073 aa11.81□□□□□ -0.52
MDC1-204ENST00000422266 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
MDC1-204ENST00000422266 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
MDC1-204ENST00000422266 SLC15A2Q16348 729 aa11.79□□□□□ -0.52
MDC1-204ENST00000422266 PROM2Q8N271 834 aa11.79□□□□□ -0.52
MDC1-204ENST00000422266 MEGF6O75095 1541 aa11.79□□□□□ -0.52
MDC1-204ENST00000422266 TNNT2P45379 298 aaPredicted RBP11.78□□□□□ -0.52
MDC1-204ENST00000422266 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
MDC1-204ENST00000422266 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
MDC1-204ENST00000422266 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
MDC1-204ENST00000422266 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
MDC1-204ENST00000422266 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
MDC1-204ENST00000422266 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.52
MDC1-204ENST00000422266 MAP2P11137 1827 aaKnown RBP11.77□□□□□ -0.52
MDC1-204ENST00000422266 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
MDC1-204ENST00000422266 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
MDC1-204ENST00000422266 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
MDC1-204ENST00000422266 EYA1Q99502 592 aa11.76□□□□□ -0.53
MDC1-204ENST00000422266 BTAF1O14981 1849 aa11.75□□□□□ -0.53
MDC1-204ENST00000422266 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
MDC1-204ENST00000422266 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
MDC1-204ENST00000422266 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
MDC1-204ENST00000422266 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
MDC1-204ENST00000422266 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
MDC1-204ENST00000422266 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
MDC1-204ENST00000422266 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
MDC1-204ENST00000422266 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
MDC1-204ENST00000422266 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
MDC1-204ENST00000422266 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
MDC1-204ENST00000422266 CYP27B1O15528 508 aa11.73□□□□□ -0.53
MDC1-204ENST00000422266 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
MDC1-204ENST00000422266 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
MDC1-204ENST00000422266 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
MDC1-204ENST00000422266 CCNL1Q9UK58 526 aaPredicted RBP11.73□□□□□ -0.53
MDC1-204ENST00000422266 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
MDC1-204ENST00000422266 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
MDC1-204ENST00000422266 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
MDC1-204ENST00000422266 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
MDC1-204ENST00000422266 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.53
MDC1-204ENST00000422266 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
MDC1-204ENST00000422266 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.53
MDC1-204ENST00000422266 PKD1L3Q7Z443 1732 aa11.71□□□□□ -0.54
MDC1-204ENST00000422266 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
MDC1-204ENST00000422266 SHANK3Q9BYB0 1731 aa11.71□□□□□ -0.54
MDC1-204ENST00000422266 PHKG2P15735 406 aa11.7□□□□□ -0.54
MDC1-204ENST00000422266 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
MDC1-204ENST00000422266 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
MDC1-204ENST00000422266 PALLDQ8WX93 1383 aa11.69□□□□□ -0.54
MDC1-204ENST00000422266 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
MDC1-204ENST00000422266 ZBTB7AO95365 584 aa11.69□□□□□ -0.54
MDC1-204ENST00000422266 POLD1P28340 1107 aa11.69□□□□□ -0.54
MDC1-204ENST00000422266 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
MDC1-204ENST00000422266 MTHFSP49914 203 aa11.68□□□□□ -0.54
MDC1-204ENST00000422266 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
MDC1-204ENST00000422266 CASZ1Q86V15 1759 aa11.68□□□□□ -0.54
MDC1-204ENST00000422266 KDRP35968 1356 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 LY75O60449 1722 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 DIAPH1O60610 1272 aaKnown RBP11.67□□□□□ -0.54
MDC1-204ENST00000422266 IL13P35225 146 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 PTGER2P43116 358 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 PIGBQ92521 554 aa11.67□□□□□ -0.54
MDC1-204ENST00000422266 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
MDC1-204ENST00000422266 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
MDC1-204ENST00000422266 AK7Q96M32 723 aa11.66□□□□□ -0.54
MDC1-204ENST00000422266 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
MDC1-204ENST00000422266 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
MDC1-204ENST00000422266 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
MDC1-204ENST00000422266 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
MDC1-204ENST00000422266 SIK1P57059 783 aa11.65□□□□□ -0.54
MDC1-204ENST00000422266 CABP4P57796 275 aa11.65□□□□□ -0.54
MDC1-204ENST00000422266 ARXQ96QS3 562 aa11.65□□□□□ -0.54
MDC1-204ENST00000422266 PDGFDQ9GZP0 370 aaPredicted RBP11.65□□□□□ -0.54
MDC1-204ENST00000422266 MSH5O43196 834 aa11.64□□□□□ -0.55
MDC1-204ENST00000422266 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
MDC1-204ENST00000422266 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
MDC1-204ENST00000422266 MAP3K5Q99683 1374 aa11.64□□□□□ -0.55
MDC1-204ENST00000422266 SSFA2P28290 1259 aa11.63□□□□□ -0.55
MDC1-204ENST00000422266 NUDCQ9Y266 331 aa11.63□□□□□ -0.55
MDC1-204ENST00000422266 ITGB4P16144 1822 aa11.63□□□□□ -0.55
MDC1-204ENST00000422266 ATP6V1AP38606 617 aa11.62□□□□□ -0.55
MDC1-204ENST00000422266 KCNQ4P56696 695 aa11.62□□□□□ -0.55
MDC1-204ENST00000422266 SYT17Q9BSW7 474 aa11.62□□□□□ -0.55
MDC1-204ENST00000422266 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
MDC1-204ENST00000422266 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
MDC1-204ENST00000422266 ATG3Q9NT62 314 aa11.61□□□□□ -0.55
MDC1-204ENST00000422266 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
MDC1-204ENST00000422266 C5P01031 1676 aa11.61□□□□□ -0.55
MDC1-204ENST00000422266 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
MDC1-204ENST00000422266 ADRA2BP18089 450 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms