RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
NF1-203ENST00000422121 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
NF1-203ENST00000422121 EXOC5O00471 708 aa13.62□□□□□ -0.23
NF1-203ENST00000422121 IL2RBP14784 551 aa13.62□□□□□ -0.23
NF1-203ENST00000422121 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
NF1-203ENST00000422121 FLT4P35916 1363 aa13.61□□□□□ -0.23
NF1-203ENST00000422121 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
NF1-203ENST00000422121 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
NF1-203ENST00000422121 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
NF1-203ENST00000422121 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
NF1-203ENST00000422121 BCL9O00512 1426 aa13.6□□□□□ -0.23
NF1-203ENST00000422121 CAMKK2Q96RR4 588 aa13.6□□□□□ -0.23
NF1-203ENST00000422121 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
NF1-203ENST00000422121 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
NF1-203ENST00000422121 KNSTRNQ9Y448 316 aa13.6□□□□□ -0.23
NF1-203ENST00000422121 TNS2Q63HR2 1409 aa13.59□□□□□ -0.23
NF1-203ENST00000422121 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
NF1-203ENST00000422121 MEGF6O75095 1541 aa13.59□□□□□ -0.23
NF1-203ENST00000422121 NSD2O96028 1365 aa13.58□□□□□ -0.23
NF1-203ENST00000422121 OVOS2A0A0G2JMS6 1433 aa13.58□□□□□ -0.24
NF1-203ENST00000422121 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
NF1-203ENST00000422121 EZH2Q15910 746 aaKnown RBP13.58□□□□□ -0.24
NF1-203ENST00000422121 RGPD1P0DJD0 1748 aa13.58□□□□□ -0.24
NF1-203ENST00000422121 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 KCNQ2O43526 872 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 APBA3O96018 575 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
NF1-203ENST00000422121 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 EYA1Q99502 592 aa13.57□□□□□ -0.24
NF1-203ENST00000422121 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
NF1-203ENST00000422121 BAG6P46379 1132 aa13.56□□□□□ -0.24
NF1-203ENST00000422121 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
NF1-203ENST00000422121 PROM2Q8N271 834 aa13.56□□□□□ -0.24
NF1-203ENST00000422121 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
NF1-203ENST00000422121 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
NF1-203ENST00000422121 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
NF1-203ENST00000422121 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
NF1-203ENST00000422121 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
NF1-203ENST00000422121 ACSBG1Q96GR2 724 aa13.53□□□□□ -0.24
NF1-203ENST00000422121 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
NF1-203ENST00000422121 PLSCR1O15162 318 aa13.52□□□□□ -0.25
NF1-203ENST00000422121 CYP27B1O15528 508 aa13.51□□□□□ -0.25
NF1-203ENST00000422121 IL13P35225 146 aa13.51□□□□□ -0.25
NF1-203ENST00000422121 MTHFSP49914 203 aa13.51□□□□□ -0.25
NF1-203ENST00000422121 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
NF1-203ENST00000422121 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
NF1-203ENST00000422121 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
NF1-203ENST00000422121 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
NF1-203ENST00000422121 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
NF1-203ENST00000422121 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
NF1-203ENST00000422121 RREB1Q92766 1687 aa13.48□□□□□ -0.25
NF1-203ENST00000422121 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
NF1-203ENST00000422121 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
NF1-203ENST00000422121 CNGB1Q14028 1251 aaPredicted RBP13.48□□□□□ -0.25
NF1-203ENST00000422121 R3HDM1Q15032 1099 aaKnown RBP13.46□□□□□ -0.25
NF1-203ENST00000422121 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
NF1-203ENST00000422121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
NF1-203ENST00000422121 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
NF1-203ENST00000422121 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
NF1-203ENST00000422121 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
NF1-203ENST00000422121 COL3A1P02461 1466 aaPredicted RBP13.45□□□□□ -0.26
NF1-203ENST00000422121 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
NF1-203ENST00000422121 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
NF1-203ENST00000422121 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
NF1-203ENST00000422121 KDRP35968 1356 aa13.45□□□□□ -0.26
NF1-203ENST00000422121 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
NF1-203ENST00000422121 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
NF1-203ENST00000422121 BTAF1O14981 1849 aa13.44□□□□□ -0.26
NF1-203ENST00000422121 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
NF1-203ENST00000422121 ANO8Q9HCE9 1232 aaPredicted RBP13.44□□□□□ -0.26
NF1-203ENST00000422121 RGPD3A6NKT7 1758 aaPredicted RBP13.44□□□□□ -0.26
NF1-203ENST00000422121 RGPD4Q7Z3J3 1758 aa13.44□□□□□ -0.26
NF1-203ENST00000422121 PHKG2P15735 406 aa13.43□□□□□ -0.26
NF1-203ENST00000422121 DOT1LQ8TEK3 1739 aa13.42□□□□□ -0.26
NF1-203ENST00000422121 PPP2R1AP30153 589 aa13.42□□□□□ -0.26
NF1-203ENST00000422121 PDGFDQ9GZP0 370 aaPredicted RBP13.42□□□□□ -0.26
NF1-203ENST00000422121 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
NF1-203ENST00000422121 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
NF1-203ENST00000422121 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
NF1-203ENST00000422121 DIAPH1O60610 1272 aaKnown RBP13.41□□□□□ -0.26
NF1-203ENST00000422121 KCNQ4P56696 695 aa13.41□□□□□ -0.26
NF1-203ENST00000422121 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
NF1-203ENST00000422121 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
NF1-203ENST00000422121 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
NF1-203ENST00000422121 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
NF1-203ENST00000422121 PIGBQ92521 554 aa13.4□□□□□ -0.26
NF1-203ENST00000422121 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
NF1-203ENST00000422121 HMOX1P09601 288 aa13.39□□□□□ -0.27
NF1-203ENST00000422121 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
NF1-203ENST00000422121 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
NF1-203ENST00000422121 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
NF1-203ENST00000422121 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
NF1-203ENST00000422121 KDM6AO15550 1401 aaPredicted RBP13.38□□□□□ -0.27
NF1-203ENST00000422121 ITGB4P16144 1822 aa13.37□□□□□ -0.27
NF1-203ENST00000422121 ZEB1P37275 1124 aaPredicted RBP13.37□□□□□ -0.27
NF1-203ENST00000422121 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
NF1-203ENST00000422121 ZNF827Q17R98 1081 aa13.37□□□□□ -0.27
NF1-203ENST00000422121 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms