RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 EMILIN1Q9Y6C2 1016 aa15.79■□□□□ 0.12
NDUFA3-208ENST00000422029 MYOM1P52179 1685 aa15.79■□□□□ 0.12
NDUFA3-208ENST00000422029 SLC24A1O60721 1099 aa15.78■□□□□ 0.12
NDUFA3-208ENST00000422029 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
NDUFA3-208ENST00000422029 FAM208AQ9UK61 1670 aaKnown RBP15.77■□□□□ 0.12
NDUFA3-208ENST00000422029 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
NDUFA3-208ENST00000422029 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
NDUFA3-208ENST00000422029 MTFR1LQ9H019 292 aa15.77■□□□□ 0.12
NDUFA3-208ENST00000422029 NSD3Q9BZ95 1437 aa15.77■□□□□ 0.11
NDUFA3-208ENST00000422029 MSH5O43196 834 aa15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
NDUFA3-208ENST00000422029 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
NDUFA3-208ENST00000422029 ARXQ96QS3 562 aa15.74■□□□□ 0.11
NDUFA3-208ENST00000422029 CCNL1Q9UK58 526 aaPredicted RBP15.74■□□□□ 0.11
NDUFA3-208ENST00000422029 NSD2O96028 1365 aa15.74■□□□□ 0.11
NDUFA3-208ENST00000422029 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
NDUFA3-208ENST00000422029 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
NDUFA3-208ENST00000422029 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
NDUFA3-208ENST00000422029 SHANK3Q9BYB0 1731 aa15.73■□□□□ 0.11
NDUFA3-208ENST00000422029 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
NDUFA3-208ENST00000422029 PAPPAQ13219 1627 aa15.72■□□□□ 0.11
NDUFA3-208ENST00000422029 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
NDUFA3-208ENST00000422029 SMG6Q86US8 1419 aaKnown RBP15.72■□□□□ 0.11
NDUFA3-208ENST00000422029 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
NDUFA3-208ENST00000422029 INSRP06213 1382 aa15.72■□□□□ 0.11
NDUFA3-208ENST00000422029 CYP27B1O15528 508 aa15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 SLC27A3Q5K4L6 730 aa15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 FLT4P35916 1363 aa15.71■□□□□ 0.11
NDUFA3-208ENST00000422029 MSL1Q68DK7 614 aa15.7■□□□□ 0.1
NDUFA3-208ENST00000422029 COL23A1Q86Y22 540 aaPredicted RBP15.68■□□□□ 0.1
NDUFA3-208ENST00000422029 EYA1Q99502 592 aa15.67■□□□□ 0.1
NDUFA3-208ENST00000422029 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
NDUFA3-208ENST00000422029 PCDH11XQ9BZA7 1347 aa15.67■□□□□ 0.1
NDUFA3-208ENST00000422029 PCDH11YQ9BZA8 1340 aa15.67■□□□□ 0.1
NDUFA3-208ENST00000422029 GPR162Q16538 588 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 PANK3Q9H999 370 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 TIMELESSQ9UNS1 1208 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 CGNL1Q0VF96 1302 aa15.66■□□□□ 0.1
NDUFA3-208ENST00000422029 POLD1P28340 1107 aa15.65■□□□□ 0.1
NDUFA3-208ENST00000422029 EIF4G2P78344 907 aaKnown RBP eCLIP15.64■□□□□ 0.09
NDUFA3-208ENST00000422029 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
NDUFA3-208ENST00000422029 PIGBQ92521 554 aa15.64■□□□□ 0.09
NDUFA3-208ENST00000422029 WASHC2AQ641Q2 1341 aa15.64■□□□□ 0.09
NDUFA3-208ENST00000422029 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
NDUFA3-208ENST00000422029 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
NDUFA3-208ENST00000422029 LY75O60449 1722 aa15.63■□□□□ 0.09
NDUFA3-208ENST00000422029 PHF14O94880 888 aa15.63■□□□□ 0.09
NDUFA3-208ENST00000422029 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
NDUFA3-208ENST00000422029 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
NDUFA3-208ENST00000422029 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
NDUFA3-208ENST00000422029 WWC3Q9ULE0 1092 aa15.62■□□□□ 0.09
NDUFA3-208ENST00000422029 CNGB1Q14028 1251 aaPredicted RBP15.61■□□□□ 0.09
NDUFA3-208ENST00000422029 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
NDUFA3-208ENST00000422029 KIF24Q5T7B8 1368 aa15.61■□□□□ 0.09
NDUFA3-208ENST00000422029 TOGARAM1Q9Y4F4 1720 aa15.6■□□□□ 0.09
NDUFA3-208ENST00000422029 ZNF784Q8NCA9 323 aaPredicted RBP15.6■□□□□ 0.09
NDUFA3-208ENST00000422029 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
NDUFA3-208ENST00000422029 ITGB4P16144 1822 aa15.59■□□□□ 0.09
NDUFA3-208ENST00000422029 PHKG2P15735 406 aa15.58■□□□□ 0.08
NDUFA3-208ENST00000422029 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
NDUFA3-208ENST00000422029 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
NDUFA3-208ENST00000422029 AK7Q96M32 723 aa15.58■□□□□ 0.08
NDUFA3-208ENST00000422029 TMOD3Q9NYL9 352 aa15.58■□□□□ 0.08
NDUFA3-208ENST00000422029 ITPK1Q13572 414 aa15.57■□□□□ 0.08
NDUFA3-208ENST00000422029 AEBP1Q8IUX7 1158 aa15.57■□□□□ 0.08
NDUFA3-208ENST00000422029 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
NDUFA3-208ENST00000422029 C5P01031 1676 aa15.57■□□□□ 0.08
NDUFA3-208ENST00000422029 LOC102724428A0A0B4J2F2 783 aa15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 YBX3P16989 372 aaKnown RBP eCLIP15.56■□□□□ 0.081e-10■■■■□ 22.9
NDUFA3-208ENST00000422029 SIK1P57059 783 aa15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 NKX1-1Q15270 411 aaPredicted RBP15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 IFNL2Q8IZJ0 200 aa15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 QSER1Q2KHR3 1735 aa15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 PKD1L3Q7Z443 1732 aa15.56■□□□□ 0.08
NDUFA3-208ENST00000422029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.55■□□□□ 0.08
NDUFA3-208ENST00000422029 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
NDUFA3-208ENST00000422029 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
NDUFA3-208ENST00000422029 ATG3Q9NT62 314 aa15.55■□□□□ 0.08
NDUFA3-208ENST00000422029 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
NDUFA3-208ENST00000422029 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
NDUFA3-208ENST00000422029 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
NDUFA3-208ENST00000422029 TAF1LQ8IZX4 1826 aa15.53■□□□□ 0.08
NDUFA3-208ENST00000422029 GNPATO15228 680 aa15.53■□□□□ 0.08
NDUFA3-208ENST00000422029 ZNF530Q6P9A1 599 aaPredicted RBP15.53■□□□□ 0.08
NDUFA3-208ENST00000422029 C4BP0C0L5 1744 aa15.52■□□□□ 0.08
NDUFA3-208ENST00000422029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.52■□□□□ 0.08
NDUFA3-208ENST00000422029 KNSTRNQ9Y448 316 aa15.52■□□□□ 0.08
NDUFA3-208ENST00000422029 IGSF1Q8N6C5 1336 aa15.51■□□□□ 0.07
NDUFA3-208ENST00000422029 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
NDUFA3-208ENST00000422029 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
NDUFA3-208ENST00000422029 SLC4A9Q96Q91 983 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms