RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
UFD1-203ENST00000421968 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
UFD1-203ENST00000421968 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
UFD1-203ENST00000421968 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
UFD1-203ENST00000421968 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
UFD1-203ENST00000421968 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
UFD1-203ENST00000421968 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
UFD1-203ENST00000421968 RRAGCQ9HB90 399 aa17.59■□□□□ 0.41
UFD1-203ENST00000421968 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
UFD1-203ENST00000421968 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
UFD1-203ENST00000421968 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
UFD1-203ENST00000421968 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
UFD1-203ENST00000421968 PLEKHG2Q9H7P9 1386 aa17.56■□□□□ 0.4
UFD1-203ENST00000421968 CABP2Q9NPB3 220 aa17.56■□□□□ 0.4
UFD1-203ENST00000421968 ERBB3P21860 1342 aa17.55■□□□□ 0.4
UFD1-203ENST00000421968 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
UFD1-203ENST00000421968 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
UFD1-203ENST00000421968 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
UFD1-203ENST00000421968 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
UFD1-203ENST00000421968 NSD2O96028 1365 aa17.54■□□□□ 0.4
UFD1-203ENST00000421968 USP47Q96K76 1375 aa17.54■□□□□ 0.4
UFD1-203ENST00000421968 FOXN1O15353 648 aa17.53■□□□□ 0.4
UFD1-203ENST00000421968 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.4
UFD1-203ENST00000421968 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
UFD1-203ENST00000421968 C5P01031 1676 aa17.52■□□□□ 0.39
UFD1-203ENST00000421968 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
UFD1-203ENST00000421968 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
UFD1-203ENST00000421968 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
UFD1-203ENST00000421968 NFAT5O94916 1531 aa17.51■□□□□ 0.39
UFD1-203ENST00000421968 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
UFD1-203ENST00000421968 PHF14O94880 888 aa17.5■□□□□ 0.39
UFD1-203ENST00000421968 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
UFD1-203ENST00000421968 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
UFD1-203ENST00000421968 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
UFD1-203ENST00000421968 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
UFD1-203ENST00000421968 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
UFD1-203ENST00000421968 FCHSD2O94868 740 aa17.49■□□□□ 0.39
UFD1-203ENST00000421968 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
UFD1-203ENST00000421968 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
UFD1-203ENST00000421968 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
UFD1-203ENST00000421968 AK7Q96M32 723 aa17.48■□□□□ 0.39
UFD1-203ENST00000421968 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
UFD1-203ENST00000421968 TGFB2P61812 414 aa17.47■□□□□ 0.39
UFD1-203ENST00000421968 AMIGO3Q86WK7 504 aa17.47■□□□□ 0.39
UFD1-203ENST00000421968 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
UFD1-203ENST00000421968 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
UFD1-203ENST00000421968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.46■□□□□ 0.39
UFD1-203ENST00000421968 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
UFD1-203ENST00000421968 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
UFD1-203ENST00000421968 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
UFD1-203ENST00000421968 TTC21AQ8NDW8 1320 aa17.44■□□□□ 0.38
UFD1-203ENST00000421968 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
UFD1-203ENST00000421968 KIF13BQ9NQT8 1826 aa17.43■□□□□ 0.38
UFD1-203ENST00000421968 MMP10P09238 476 aa17.43■□□□□ 0.38
UFD1-203ENST00000421968 DPEP1P16444 411 aa17.43■□□□□ 0.38
UFD1-203ENST00000421968 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
UFD1-203ENST00000421968 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
UFD1-203ENST00000421968 VEGFAP15692 232 aaPredicted RBP17.42■□□□□ 0.38
UFD1-203ENST00000421968 RGS19P49795 217 aa17.42■□□□□ 0.38
UFD1-203ENST00000421968 LBX1P52954 281 aa17.42■□□□□ 0.38
UFD1-203ENST00000421968 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
UFD1-203ENST00000421968 UBR3Q6ZT12 1888 aa17.41■□□□□ 0.38
UFD1-203ENST00000421968 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
UFD1-203ENST00000421968 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
UFD1-203ENST00000421968 PDE4DIPQ5VU43 2346 aa17.41■□□□□ 0.38
UFD1-203ENST00000421968 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
UFD1-203ENST00000421968 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
UFD1-203ENST00000421968 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
UFD1-203ENST00000421968 LTN1O94822 1766 aa17.39■□□□□ 0.37
UFD1-203ENST00000421968 SSFA2P28290 1259 aa17.39■□□□□ 0.37
UFD1-203ENST00000421968 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
UFD1-203ENST00000421968 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
UFD1-203ENST00000421968 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
UFD1-203ENST00000421968 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
UFD1-203ENST00000421968 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
UFD1-203ENST00000421968 SBF1O95248 1867 aa17.36■□□□□ 0.37
UFD1-203ENST00000421968 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
UFD1-203ENST00000421968 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
UFD1-203ENST00000421968 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
UFD1-203ENST00000421968 CNTNAP1P78357 1384 aa17.33■□□□□ 0.36
UFD1-203ENST00000421968 GLTPD2A6NH11 291 aa17.33■□□□□ 0.36
UFD1-203ENST00000421968 KCNA3P22001 575 aa17.33■□□□□ 0.36
UFD1-203ENST00000421968 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
UFD1-203ENST00000421968 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.36
UFD1-203ENST00000421968 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
UFD1-203ENST00000421968 ZC3H4Q9UPT8 1303 aaKnown RBP17.32■□□□□ 0.36
UFD1-203ENST00000421968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.32■□□□□ 0.36
UFD1-203ENST00000421968 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
UFD1-203ENST00000421968 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
UFD1-203ENST00000421968 GNPATO15228 680 aa17.31■□□□□ 0.36
UFD1-203ENST00000421968 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
UFD1-203ENST00000421968 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
UFD1-203ENST00000421968 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
UFD1-203ENST00000421968 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
UFD1-203ENST00000421968 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
UFD1-203ENST00000421968 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
UFD1-203ENST00000421968 VEGFBP49765 207 aa17.29■□□□□ 0.36
UFD1-203ENST00000421968 TMF1P82094 1093 aa17.29■□□□□ 0.36
UFD1-203ENST00000421968 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
UFD1-203ENST00000421968 IP6K1Q92551 441 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms