RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 NUP188Q5SRE5 1749 aa24.77■■□□□ 1.56
UBXN11-208ENST00000421827 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
UBXN11-208ENST00000421827 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
UBXN11-208ENST00000421827 MAP2P11137 1827 aaKnown RBP24.77■■□□□ 1.56
UBXN11-208ENST00000421827 NHSQ6T4R5 1651 aa24.75■■□□□ 1.55
UBXN11-208ENST00000421827 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
UBXN11-208ENST00000421827 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
UBXN11-208ENST00000421827 PROM2Q8N271 834 aa24.72■■□□□ 1.55
UBXN11-208ENST00000421827 KAT6BQ8WYB5 2073 aa24.7■■□□□ 1.54
UBXN11-208ENST00000421827 TXNRD1Q16881 649 aa24.7■■□□□ 1.54
UBXN11-208ENST00000421827 SHANK3Q9BYB0 1731 aa24.69■■□□□ 1.54
UBXN11-208ENST00000421827 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
UBXN11-208ENST00000421827 AMER1Q5JTC6 1135 aaPredicted RBP24.68■■□□□ 1.54
UBXN11-208ENST00000421827 EYA1Q99502 592 aa24.68■■□□□ 1.54
UBXN11-208ENST00000421827 EIF4A2Q14240 407 aaKnown RBP24.67■■□□□ 1.54
UBXN11-208ENST00000421827 BTAF1O14981 1849 aa24.65■■□□□ 1.54
UBXN11-208ENST00000421827 PCDH11XQ9BZA7 1347 aa24.65■■□□□ 1.54
UBXN11-208ENST00000421827 PCDH11YQ9BZA8 1340 aa24.65■■□□□ 1.54
UBXN11-208ENST00000421827 LRP5O75197 1615 aa24.65■■□□□ 1.54
UBXN11-208ENST00000421827 PER1O15534 1290 aaPredicted RBP24.65■■□□□ 1.54
UBXN11-208ENST00000421827 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
UBXN11-208ENST00000421827 SYTL4Q96C24 671 aaPredicted RBP24.65■■□□□ 1.54
UBXN11-208ENST00000421827 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
UBXN11-208ENST00000421827 DOT1LQ8TEK3 1739 aa24.61■■□□□ 1.53
UBXN11-208ENST00000421827 CYP27B1O15528 508 aa24.61■■□□□ 1.53
UBXN11-208ENST00000421827 STK32BQ9NY57 414 aa24.6■■□□□ 1.53
UBXN11-208ENST00000421827 SPG7Q9UQ90 795 aa24.6■■□□□ 1.53
UBXN11-208ENST00000421827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.59■■□□□ 1.53
UBXN11-208ENST00000421827 IGSF1Q8N6C5 1336 aa24.59■■□□□ 1.53
UBXN11-208ENST00000421827 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.53
UBXN11-208ENST00000421827 SLC15A2Q16348 729 aa24.57■■□□□ 1.52
UBXN11-208ENST00000421827 CC2D1BQ5T0F9 858 aaKnown RBP24.57■■□□□ 1.52
UBXN11-208ENST00000421827 LRRC4BQ9NT99 713 aa24.56■■□□□ 1.52
UBXN11-208ENST00000421827 SLC27A3Q5K4L6 730 aa24.55■■□□□ 1.52
UBXN11-208ENST00000421827 PLEKHG2Q9H7P9 1386 aa24.54■■□□□ 1.52
UBXN11-208ENST00000421827 NPC1L1Q9UHC9 1359 aa24.54■■□□□ 1.52
UBXN11-208ENST00000421827 NKX1-1Q15270 411 aaPredicted RBP24.54■■□□□ 1.52
UBXN11-208ENST00000421827 MTHFSP49914 203 aa24.52■■□□□ 1.52
UBXN11-208ENST00000421827 PAPPAQ13219 1627 aa24.51■■□□□ 1.51
UBXN11-208ENST00000421827 IFNL2Q8IZJ0 200 aa24.51■■□□□ 1.51
UBXN11-208ENST00000421827 SPON1Q9HCB6 807 aa24.51■■□□□ 1.51
UBXN11-208ENST00000421827 PHKG2P15735 406 aa24.5■■□□□ 1.51
UBXN11-208ENST00000421827 IL13P35225 146 aa24.5■■□□□ 1.51
UBXN11-208ENST00000421827 MPRIPQ6WCQ1 1025 aa24.5■■□□□ 1.51
UBXN11-208ENST00000421827 PDGFDQ9GZP0 370 aaPredicted RBP24.5■■□□□ 1.51
UBXN11-208ENST00000421827 CNGB1Q14028 1251 aaPredicted RBP24.49■■□□□ 1.51
UBXN11-208ENST00000421827 ZNF827Q17R98 1081 aa24.49■■□□□ 1.51
UBXN11-208ENST00000421827 CASZ1Q86V15 1759 aa24.49■■□□□ 1.51
UBXN11-208ENST00000421827 KCNQ4P56696 695 aa24.48■■□□□ 1.51
UBXN11-208ENST00000421827 AEBP1Q8IUX7 1158 aa24.48■■□□□ 1.51
UBXN11-208ENST00000421827 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
UBXN11-208ENST00000421827 LY75O60449 1722 aa24.47■■□□□ 1.51
UBXN11-208ENST00000421827 PLEKHO1Q53GL0 409 aaPredicted RBP24.47■■□□□ 1.51
UBXN11-208ENST00000421827 SULT6B1Q6IMI4 303 aa24.47■■□□□ 1.51
UBXN11-208ENST00000421827 CCNL1Q9UK58 526 aaPredicted RBP24.47■■□□□ 1.51
UBXN11-208ENST00000421827 AKT1S1Q96B36 256 aa24.46■■□□□ 1.51
UBXN11-208ENST00000421827 ZBTB7AO95365 584 aa24.45■■□□□ 1.5
UBXN11-208ENST00000421827 AMOTQ4VCS5 1084 aa24.45■■□□□ 1.5
UBXN11-208ENST00000421827 PIGBQ92521 554 aa24.45■■□□□ 1.5
UBXN11-208ENST00000421827 KDRP35968 1356 aa24.44■■□□□ 1.5
UBXN11-208ENST00000421827 SMARCC1Q92922 1105 aaPredicted RBP24.44■■□□□ 1.5
UBXN11-208ENST00000421827 ITGB4P16144 1822 aa24.44■■□□□ 1.5
UBXN11-208ENST00000421827 PALLDQ8WX93 1383 aa24.43■■□□□ 1.5
UBXN11-208ENST00000421827 ZNF530Q6P9A1 599 aaPredicted RBP24.43■■□□□ 1.5
UBXN11-208ENST00000421827 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
UBXN11-208ENST00000421827 TMOD3Q9NYL9 352 aa24.42■■□□□ 1.5
UBXN11-208ENST00000421827 PPP1R1BQ9UD71 204 aaPredicted RBP24.42■■□□□ 1.5
UBXN11-208ENST00000421827 HSP90AB1P08238 724 aaKnown RBP24.41■■□□□ 1.5
UBXN11-208ENST00000421827 ATF5Q9Y2D1 282 aaPredicted RBP24.41■■□□□ 1.5
UBXN11-208ENST00000421827 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
UBXN11-208ENST00000421827 MTFR1LQ9H019 292 aa24.4■■□□□ 1.5
UBXN11-208ENST00000421827 TFCP2L1Q9NZI6 479 aa24.4■■□□□ 1.5
UBXN11-208ENST00000421827 HMGB2P26583 209 aaKnown RBP24.39■■□□□ 1.49
UBXN11-208ENST00000421827 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
UBXN11-208ENST00000421827 C1orf141Q5JVX7 400 aa24.38■■□□□ 1.49
UBXN11-208ENST00000421827 HMOX1P09601 288 aa24.37■■□□□ 1.49
UBXN11-208ENST00000421827 PTGER2P43116 358 aa24.37■■□□□ 1.49
UBXN11-208ENST00000421827 PNPLA7Q6ZV29 1317 aa24.36■■□□□ 1.49
UBXN11-208ENST00000421827 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
UBXN11-208ENST00000421827 QSER1Q2KHR3 1735 aa24.35■■□□□ 1.49
UBXN11-208ENST00000421827 COL3A1P02461 1466 aaPredicted RBP24.35■■□□□ 1.49
UBXN11-208ENST00000421827 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
UBXN11-208ENST00000421827 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
UBXN11-208ENST00000421827 C5P01031 1676 aa24.33■■□□□ 1.49
UBXN11-208ENST00000421827 LOC102724428A0A0B4J2F2 783 aa24.32■■□□□ 1.48
UBXN11-208ENST00000421827 SIK1P57059 783 aa24.32■■□□□ 1.48
UBXN11-208ENST00000421827 CABP4P57796 275 aa24.32■■□□□ 1.48
UBXN11-208ENST00000421827 SGIP1Q9BQI5 828 aa24.32■■□□□ 1.48
UBXN11-208ENST00000421827 ATG3Q9NT62 314 aa24.32■■□□□ 1.48
UBXN11-208ENST00000421827 TUBGCP6Q96RT7 1819 aa24.31■■□□□ 1.48
UBXN11-208ENST00000421827 U2SURPO15042 1029 aaKnown RBP24.31■■□□□ 1.48
UBXN11-208ENST00000421827 CFAP53Q96M91 514 aa24.31■■□□□ 1.48
UBXN11-208ENST00000421827 PPP2R1AP30153 589 aa24.3■■□□□ 1.48
UBXN11-208ENST00000421827 AKAP4Q5JQC9 854 aa24.3■■□□□ 1.48
UBXN11-208ENST00000421827 TAF1LQ8IZX4 1826 aa24.3■■□□□ 1.48
UBXN11-208ENST00000421827 MSH5O43196 834 aa24.27■■□□□ 1.48
UBXN11-208ENST00000421827 ATP6V1AP38606 617 aa24.27■■□□□ 1.48
UBXN11-208ENST00000421827 COL23A1Q86Y22 540 aaPredicted RBP24.27■■□□□ 1.48
UBXN11-208ENST00000421827 AK7Q96M32 723 aa24.27■■□□□ 1.48
UBXN11-208ENST00000421827 C4BP0C0L5 1744 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms