RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-202ENST00000421230 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
PPFIA3-202ENST00000421230 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
PPFIA3-202ENST00000421230 ERBB3P21860 1342 aa23.35■■□□□ 1.33
PPFIA3-202ENST00000421230 DLG5Q8TDM6 1919 aa23.35■■□□□ 1.33
PPFIA3-202ENST00000421230 COL16A1Q07092 1604 aaPredicted RBP23.34■■□□□ 1.33
PPFIA3-202ENST00000421230 SKAP1Q86WV1 359 aa23.34■■□□□ 1.33
PPFIA3-202ENST00000421230 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
PPFIA3-202ENST00000421230 E9PSI1 815 aa23.33■■□□□ 1.33
PPFIA3-202ENST00000421230 TRMT2AQ8IZ69 625 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-202ENST00000421230 MTHFSDQ2M296 383 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-202ENST00000421230 THUMPD2Q9BTF0 503 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-202ENST00000421230 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
PPFIA3-202ENST00000421230 CSB-PGBD3P0DP91 1061 aa23.31■■□□□ 1.32
PPFIA3-202ENST00000421230 C20orf194Q5TEA3 1177 aa23.3■■□□□ 1.32
PPFIA3-202ENST00000421230 NLRP2Q9NX02 1062 aa23.3■■□□□ 1.32
PPFIA3-202ENST00000421230 ABCC6O95255 1503 aa23.29■■□□□ 1.32
PPFIA3-202ENST00000421230 CAMTA1Q9Y6Y1 1673 aa23.29■■□□□ 1.32
PPFIA3-202ENST00000421230 DCTN1Q14203 1278 aa23.29■■□□□ 1.32
PPFIA3-202ENST00000421230 COL22A1Q8NFW1 1626 aaPredicted RBP23.29■■□□□ 1.32
PPFIA3-202ENST00000421230 CENPQQ7L2Z9 268 aaPredicted RBP23.28■■□□□ 1.32
PPFIA3-202ENST00000421230 GSE1Q14687 1217 aa23.27■■□□□ 1.32
PPFIA3-202ENST00000421230 NFKBIBQ15653 356 aa23.27■■□□□ 1.32
PPFIA3-202ENST00000421230 LMO7Q8WWI1 1683 aa23.27■■□□□ 1.32
PPFIA3-202ENST00000421230 NCAPD2Q15021 1401 aa23.26■■□□□ 1.31
PPFIA3-202ENST00000421230 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
PPFIA3-202ENST00000421230 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
PPFIA3-202ENST00000421230 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
PPFIA3-202ENST00000421230 MCM10Q7L590 875 aa23.24■■□□□ 1.31
PPFIA3-202ENST00000421230 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
PPFIA3-202ENST00000421230 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
PPFIA3-202ENST00000421230 COL5A2P05997 1499 aaPredicted RBP23.23■■□□□ 1.31
PPFIA3-202ENST00000421230 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
PPFIA3-202ENST00000421230 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
PPFIA3-202ENST00000421230 IL16Q14005 1332 aa23.22■■□□□ 1.31
PPFIA3-202ENST00000421230 C8orf34Q49A92 452 aa23.22■■□□□ 1.31
PPFIA3-202ENST00000421230 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
PPFIA3-202ENST00000421230 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
PPFIA3-202ENST00000421230 ADAMTS2O95450 1211 aa23.21■■□□□ 1.31
PPFIA3-202ENST00000421230 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
PPFIA3-202ENST00000421230 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
PPFIA3-202ENST00000421230 WDR17Q8IZU2 1322 aa23.2■■□□□ 1.31
PPFIA3-202ENST00000421230 BTG4Q9NY30 223 aa23.2■■□□□ 1.3
PPFIA3-202ENST00000421230 EVA1CP58658 441 aa23.2■■□□□ 1.3
PPFIA3-202ENST00000421230 TOM1L2Q6ZVM7 507 aa23.2■■□□□ 1.3
PPFIA3-202ENST00000421230 SLC4A3P48751 1232 aa23.18■■□□□ 1.3
PPFIA3-202ENST00000421230 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-202ENST00000421230 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-202ENST00000421230 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
PPFIA3-202ENST00000421230 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-202ENST00000421230 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
PPFIA3-202ENST00000421230 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
PPFIA3-202ENST00000421230 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
PPFIA3-202ENST00000421230 COL14A1Q05707 1796 aaKnown RBP23.16■■□□□ 1.3
PPFIA3-202ENST00000421230 ZNF530Q6P9A1 599 aaPredicted RBP23.16■■□□□ 1.3
PPFIA3-202ENST00000421230 DAXXQ9UER7 740 aaPredicted RBP23.16■■□□□ 1.3
PPFIA3-202ENST00000421230 BRPF3Q9ULD4 1205 aa23.16■■□□□ 1.3
PPFIA3-202ENST00000421230 MEGF6O75095 1541 aa23.15■■□□□ 1.3
PPFIA3-202ENST00000421230 EXOSC9Q06265 439 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-202ENST00000421230 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
PPFIA3-202ENST00000421230 ZNF853P0CG23 659 aa23.14■■□□□ 1.3
PPFIA3-202ENST00000421230 GNAI1P63096 354 aa23.14■■□□□ 1.3
PPFIA3-202ENST00000421230 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.3
PPFIA3-202ENST00000421230 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.3
PPFIA3-202ENST00000421230 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.3
PPFIA3-202ENST00000421230 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
PPFIA3-202ENST00000421230 IL17REQ8NFR9 667 aa23.13■■□□□ 1.29
PPFIA3-202ENST00000421230 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
PPFIA3-202ENST00000421230 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
PPFIA3-202ENST00000421230 JCADQ9P266 1359 aa23.12■■□□□ 1.29
PPFIA3-202ENST00000421230 CRB1P82279 1406 aa23.12■■□□□ 1.29
PPFIA3-202ENST00000421230 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
PPFIA3-202ENST00000421230 HSPA1LP34931 641 aa23.12■■□□□ 1.29
PPFIA3-202ENST00000421230 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
PPFIA3-202ENST00000421230 MIS18AQ9NYP9 233 aa23.11■■□□□ 1.29
PPFIA3-202ENST00000421230 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
PPFIA3-202ENST00000421230 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
PPFIA3-202ENST00000421230 C1orf141Q5JVX7 400 aa23.1■■□□□ 1.29
PPFIA3-202ENST00000421230 BCAR3O75815 825 aa23.09■■□□□ 1.29
PPFIA3-202ENST00000421230 MPRIPQ6WCQ1 1025 aa23.09■■□□□ 1.29
PPFIA3-202ENST00000421230 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
PPFIA3-202ENST00000421230 CHL1O00533 1208 aa23.08■■□□□ 1.28
PPFIA3-202ENST00000421230 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
PPFIA3-202ENST00000421230 LRRC37A3O60309 1634 aa23.07■■□□□ 1.28
PPFIA3-202ENST00000421230 ELL2O00472 640 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 BCL2L13Q9BXK5 485 aa23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 TSPYL6Q8N831 410 aa23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 OVOS2A0A0G2JMS6 1433 aa23.05■■□□□ 1.28
PPFIA3-202ENST00000421230 IL2RBP14784 551 aa23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 C8orf58Q8NAV2 365 aa23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 VIRMAQ69YN4 1812 aaKnown RBP23.04■■□□□ 1.28
PPFIA3-202ENST00000421230 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
PPFIA3-202ENST00000421230 PARP4Q9UKK3 1724 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-202ENST00000421230 RNMTO43148 476 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-202ENST00000421230 PHKG2P15735 406 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms