RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 JMYQ8N9B5 988 aa10.32□□□□□ -0.76
RFX3-205ENST00000420720 ZNF526Q8TF50 670 aaPredicted RBP10.32□□□□□ -0.76
RFX3-205ENST00000420720 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
RFX3-205ENST00000420720 TRPM3Q9HCF6 1732 aaPredicted RBP10.32□□□□□ -0.76
RFX3-205ENST00000420720 CRYBG1Q9Y4K1 1723 aa10.32□□□□□ -0.76
RFX3-205ENST00000420720 PLEKHG3A1L390 1219 aa10.31□□□□□ -0.76
RFX3-205ENST00000420720 KIF3CO14782 793 aa10.31□□□□□ -0.76
RFX3-205ENST00000420720 PDE3BQ13370 1112 aa10.31□□□□□ -0.76
RFX3-205ENST00000420720 NLGN2Q8NFZ4 835 aa10.31□□□□□ -0.76
RFX3-205ENST00000420720 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
RFX3-205ENST00000420720 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 EVA1CP58658 441 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
RFX3-205ENST00000420720 SLC15A2Q16348 729 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
RFX3-205ENST00000420720 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 ABTB2Q8N961 1025 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 WWC3Q9ULE0 1092 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 ALS2Q96Q42 1657 aa10.3□□□□□ -0.76
RFX3-205ENST00000420720 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
RFX3-205ENST00000420720 POLR3AO14802 1390 aaPredicted RBP10.28□□□□□ -0.76
RFX3-205ENST00000420720 TNS2Q63HR2 1409 aa10.28□□□□□ -0.76
RFX3-205ENST00000420720 HTRA3P83110 453 aa10.28□□□□□ -0.76
RFX3-205ENST00000420720 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
RFX3-205ENST00000420720 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
RFX3-205ENST00000420720 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
RFX3-205ENST00000420720 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
RFX3-205ENST00000420720 NLRP13Q86W25 1043 aa10.27□□□□□ -0.77
RFX3-205ENST00000420720 CENPJQ9HC77 1338 aaPredicted RBP10.27□□□□□ -0.77
RFX3-205ENST00000420720 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.77
RFX3-205ENST00000420720 PARP4Q9UKK3 1724 aaKnown RBP10.27□□□□□ -0.77
RFX3-205ENST00000420720 ZBTB7CA1YPR0 619 aa10.26□□□□□ -0.77
RFX3-205ENST00000420720 GCP02774 474 aa10.26□□□□□ -0.77
RFX3-205ENST00000420720 PLCG2P16885 1265 aa10.26□□□□□ -0.77
RFX3-205ENST00000420720 GSE1Q14687 1217 aa10.26□□□□□ -0.77
RFX3-205ENST00000420720 COL24A1Q17RW2 1714 aa10.26□□□□□ -0.77
RFX3-205ENST00000420720 PPIP5K1Q6PFW1 1433 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 SSH2Q76I76 1423 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 GRIN3BO60391 1043 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 CABP1Q9NZU7 370 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 USP19O94966 1318 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 PAPPAQ13219 1627 aa10.25□□□□□ -0.77
RFX3-205ENST00000420720 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 NLRP6P59044 892 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 TXNRD1Q16881 649 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
RFX3-205ENST00000420720 CPDO75976 1380 aa10.24□□□□□ -0.77
RFX3-205ENST00000420720 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
RFX3-205ENST00000420720 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
RFX3-205ENST00000420720 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
RFX3-205ENST00000420720 AATKQ6ZMQ8 1374 aa10.23□□□□□ -0.77
RFX3-205ENST00000420720 PHRF1Q9P1Y6 1649 aaKnown RBP10.22□□□□□ -0.77
RFX3-205ENST00000420720 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
RFX3-205ENST00000420720 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
RFX3-205ENST00000420720 LRRC37A3O60309 1634 aa10.22□□□□□ -0.77
RFX3-205ENST00000420720 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
RFX3-205ENST00000420720 ITSN1Q15811 1721 aa10.21□□□□□ -0.77
RFX3-205ENST00000420720 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
RFX3-205ENST00000420720 OCEL1Q9H607 264 aa10.21□□□□□ -0.77
RFX3-205ENST00000420720 BRD4O60885 1362 aaPredicted RBP10.2□□□□□ -0.78
RFX3-205ENST00000420720 USP6P35125 1406 aa10.2□□□□□ -0.78
RFX3-205ENST00000420720 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
RFX3-205ENST00000420720 TOM1L2Q6ZVM7 507 aa10.2□□□□□ -0.78
RFX3-205ENST00000420720 EVC2Q86UK5 1308 aa10.2□□□□□ -0.78
RFX3-205ENST00000420720 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
RFX3-205ENST00000420720 KIAA1210Q9ULL0 1709 aa10.19□□□□□ -0.78
RFX3-205ENST00000420720 COL5A2P05997 1499 aaPredicted RBP10.19□□□□□ -0.78
RFX3-205ENST00000420720 C11orf95C9JLR9 678 aaPredicted RBP10.19□□□□□ -0.78
RFX3-205ENST00000420720 SOX12O15370 315 aa10.19□□□□□ -0.78
RFX3-205ENST00000420720 HSPA1AP0DMV8 641 aaKnown RBP10.19□□□□□ -0.78
RFX3-205ENST00000420720 HSPA1BP0DMV9 641 aaKnown RBP10.19□□□□□ -0.78
RFX3-205ENST00000420720 ZNF827Q17R98 1081 aa10.19□□□□□ -0.78
RFX3-205ENST00000420720 SPOCK2Q92563 424 aa10.19□□□□□ -0.78
RFX3-205ENST00000420720 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
RFX3-205ENST00000420720 CRB1P82279 1406 aa10.18□□□□□ -0.78
RFX3-205ENST00000420720 TTC21BQ7Z4L5 1316 aa10.18□□□□□ -0.78
RFX3-205ENST00000420720 TOMM70O94826 608 aa10.18□□□□□ -0.78
RFX3-205ENST00000420720 PSEN1P49768 467 aa10.17□□□□□ -0.78
RFX3-205ENST00000420720 DDB1Q16531 1140 aa10.17□□□□□ -0.78
RFX3-205ENST00000420720 LMO7Q8WWI1 1683 aa10.17□□□□□ -0.78
RFX3-205ENST00000420720 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
RFX3-205ENST00000420720 CSB-PGBD3P0DP91 1061 aa10.16□□□□□ -0.78
RFX3-205ENST00000420720 ARHGEF25Q86VW2 580 aa10.16□□□□□ -0.78
RFX3-205ENST00000420720 KCNH5Q8NCM2 988 aa10.16□□□□□ -0.78
RFX3-205ENST00000420720 WDR17Q8IZU2 1322 aa10.15□□□□□ -0.78
RFX3-205ENST00000420720 SLIT3O75094 1523 aa10.15□□□□□ -0.78
RFX3-205ENST00000420720 BCL9O00512 1426 aa10.15□□□□□ -0.79
RFX3-205ENST00000420720 TTC21AQ8NDW8 1320 aa10.14□□□□□ -0.79
RFX3-205ENST00000420720 POLD1P28340 1107 aa10.14□□□□□ -0.79
RFX3-205ENST00000420720 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
RFX3-205ENST00000420720 QRICH2Q9H0J4 1663 aa10.14□□□□□ -0.79
RFX3-205ENST00000420720 CPSF1Q10570 1443 aaKnown RBP10.14□□□□□ -0.79
RFX3-205ENST00000420720 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
RFX3-205ENST00000420720 ST18O60284 1047 aa10.13□□□□□ -0.79
RFX3-205ENST00000420720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms