RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
PRAME-207ENST00000420709 PRIM1P49642 420 aaKnown RBP17.95■□□□□ 0.46
PRAME-207ENST00000420709 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
PRAME-207ENST00000420709 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
PRAME-207ENST00000420709 NSD2O96028 1365 aa17.94■□□□□ 0.46
PRAME-207ENST00000420709 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
PRAME-207ENST00000420709 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
PRAME-207ENST00000420709 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
PRAME-207ENST00000420709 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
PRAME-207ENST00000420709 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
PRAME-207ENST00000420709 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
PRAME-207ENST00000420709 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
PRAME-207ENST00000420709 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
PRAME-207ENST00000420709 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
PRAME-207ENST00000420709 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
PRAME-207ENST00000420709 LY75O60449 1722 aa17.9■□□□□ 0.46
PRAME-207ENST00000420709 RAPGEF4Q8WZA2 1011 aa17.9■□□□□ 0.46
PRAME-207ENST00000420709 ARXQ96QS3 562 aa17.9■□□□□ 0.46
PRAME-207ENST00000420709 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
PRAME-207ENST00000420709 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
PRAME-207ENST00000420709 INSRP06213 1382 aa17.89■□□□□ 0.45
PRAME-207ENST00000420709 FLT4P35916 1363 aa17.89■□□□□ 0.45
PRAME-207ENST00000420709 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.45
PRAME-207ENST00000420709 TATP17735 454 aaPredicted RBP17.88■□□□□ 0.45
PRAME-207ENST00000420709 UTRNP46939 3433 aa17.88■□□□□ 0.45
PRAME-207ENST00000420709 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
PRAME-207ENST00000420709 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
PRAME-207ENST00000420709 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
PRAME-207ENST00000420709 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
PRAME-207ENST00000420709 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
PRAME-207ENST00000420709 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
PRAME-207ENST00000420709 PPM1GO15355 546 aaPredicted RBP17.85■□□□□ 0.45
PRAME-207ENST00000420709 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
PRAME-207ENST00000420709 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
PRAME-207ENST00000420709 KIF24Q5T7B8 1368 aa17.83■□□□□ 0.45
PRAME-207ENST00000420709 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.44
PRAME-207ENST00000420709 TOGARAM1Q9Y4F4 1720 aa17.83■□□□□ 0.44
PRAME-207ENST00000420709 CYP27B1O15528 508 aa17.82■□□□□ 0.44
PRAME-207ENST00000420709 MSH5O43196 834 aa17.82■□□□□ 0.44
PRAME-207ENST00000420709 POLD1P28340 1107 aa17.82■□□□□ 0.44
PRAME-207ENST00000420709 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 ANKRD26Q9UPS8 1709 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
PRAME-207ENST00000420709 C5P01031 1676 aa17.8■□□□□ 0.44
PRAME-207ENST00000420709 MAP2P11137 1827 aaKnown RBP17.8■□□□□ 0.44
PRAME-207ENST00000420709 ITGB4P16144 1822 aa17.79■□□□□ 0.44
PRAME-207ENST00000420709 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
PRAME-207ENST00000420709 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
PRAME-207ENST00000420709 TNNT2P45379 298 aaPredicted RBP17.78■□□□□ 0.44
PRAME-207ENST00000420709 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
PRAME-207ENST00000420709 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
PRAME-207ENST00000420709 NCAPD2Q15021 1401 aa17.78■□□□□ 0.44
PRAME-207ENST00000420709 CHD4Q14839 1912 aa17.77■□□□□ 0.44
PRAME-207ENST00000420709 GPR162Q16538 588 aa17.77■□□□□ 0.44
PRAME-207ENST00000420709 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
PRAME-207ENST00000420709 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
PRAME-207ENST00000420709 EYA1Q99502 592 aa17.77■□□□□ 0.44
PRAME-207ENST00000420709 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
PRAME-207ENST00000420709 WASHC2AQ641Q2 1341 aa17.76■□□□□ 0.43
PRAME-207ENST00000420709 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
PRAME-207ENST00000420709 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
PRAME-207ENST00000420709 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
PRAME-207ENST00000420709 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
PRAME-207ENST00000420709 PIGBQ92521 554 aa17.74■□□□□ 0.43
PRAME-207ENST00000420709 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
PRAME-207ENST00000420709 C4BP0C0L5 1744 aa17.73■□□□□ 0.43
PRAME-207ENST00000420709 SMIM5Q71RC9 77 aa17.73■□□□□ 0.43
PRAME-207ENST00000420709 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
PRAME-207ENST00000420709 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
PRAME-207ENST00000420709 PHF14O94880 888 aa17.71■□□□□ 0.43
PRAME-207ENST00000420709 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
PRAME-207ENST00000420709 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.43
PRAME-207ENST00000420709 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
PRAME-207ENST00000420709 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
PRAME-207ENST00000420709 AK7Q96M32 723 aa17.71■□□□□ 0.43
PRAME-207ENST00000420709 PANK3Q9H999 370 aa17.7■□□□□ 0.42
PRAME-207ENST00000420709 PHKG2P15735 406 aa17.69■□□□□ 0.42
PRAME-207ENST00000420709 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
PRAME-207ENST00000420709 UBR3Q6ZT12 1888 aa17.69■□□□□ 0.42
PRAME-207ENST00000420709 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
PRAME-207ENST00000420709 LINC00116Q8NCU8 138 aa17.68■□□□□ 0.42
PRAME-207ENST00000420709 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
PRAME-207ENST00000420709 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
PRAME-207ENST00000420709 YBX3P16989 372 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRAME-207ENST00000420709 SIK1P57059 783 aa17.67■□□□□ 0.42
PRAME-207ENST00000420709 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
PRAME-207ENST00000420709 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
PRAME-207ENST00000420709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRAME-207ENST00000420709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
PRAME-207ENST00000420709 ITPK1Q13572 414 aa17.65■□□□□ 0.42
PRAME-207ENST00000420709 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
PRAME-207ENST00000420709 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
PRAME-207ENST00000420709 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
PRAME-207ENST00000420709 GNPATO15228 680 aa17.62■□□□□ 0.41
PRAME-207ENST00000420709 MORC1Q86VD1 984 aa17.62■□□□□ 0.41
PRAME-207ENST00000420709 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
PRAME-207ENST00000420709 SSFA2P28290 1259 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms