RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 COL18A1P39060 1754 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 SEMA3EO15041 775 aa6.79□□□□□ -1.32
PMS1-207ENST00000420421 PPM1GO15355 546 aaPredicted RBP6.79□□□□□ -1.32
PMS1-207ENST00000420421 U2AF1L5P0DN76 240 aaPredicted RBP6.79□□□□□ -1.32
PMS1-207ENST00000420421 PYGBP11216 843 aa6.79□□□□□ -1.32
PMS1-207ENST00000420421 HOXC9P31274 260 aa6.79□□□□□ -1.32
PMS1-207ENST00000420421 U2AF1Q01081 240 aaKnown RBP eCLIP6.79□□□□□ -1.32
PMS1-207ENST00000420421 RRS1Q15050 365 aaKnown RBP6.79□□□□□ -1.32
PMS1-207ENST00000420421 CCDC27Q2M243 656 aa6.79□□□□□ -1.32
PMS1-207ENST00000420421 CERKQ8TCT0 537 aa6.79□□□□□ -1.32
PMS1-207ENST00000420421 YTHDC1Q96MU7 727 aaKnown RBP6.79□□□□□ -1.32
PMS1-207ENST00000420421 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
PMS1-207ENST00000420421 VIRMAQ69YN4 1812 aaKnown RBP6.78□□□□□ -1.32
PMS1-207ENST00000420421 RGPD2P0DJD1 1756 aa6.78□□□□□ -1.32
PMS1-207ENST00000420421 U2SURPO15042 1029 aaKnown RBP6.78□□□□□ -1.32
PMS1-207ENST00000420421 ZMYND10O75800 440 aa6.78□□□□□ -1.32
PMS1-207ENST00000420421 E2F4Q16254 413 aa6.78□□□□□ -1.32
PMS1-207ENST00000420421 NPM2Q86SE8 214 aaKnown RBP6.78□□□□□ -1.32
PMS1-207ENST00000420421 CAMTA1Q9Y6Y1 1673 aa6.77□□□□□ -1.32
PMS1-207ENST00000420421 MAPK8IP3Q9UPT6 1336 aa6.77□□□□□ -1.32
PMS1-207ENST00000420421 COL16A1Q07092 1604 aaPredicted RBP6.77□□□□□ -1.33
PMS1-207ENST00000420421 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
PMS1-207ENST00000420421 LMOD3Q0VAK6 560 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 EIF4A2Q14240 407 aaKnown RBP6.77□□□□□ -1.33
PMS1-207ENST00000420421 HSP90AB2PQ58FF8 381 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 NUTM2GQ5VZR2 741 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 RASEFQ8IZ41 740 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 PLEKHF1Q96S99 279 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 KDRP35968 1356 aa6.77□□□□□ -1.33
PMS1-207ENST00000420421 IGSF1Q8N6C5 1336 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 FBLN1P23142 703 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 CALD1Q05682 793 aaKnown RBP6.76□□□□□ -1.33
PMS1-207ENST00000420421 SMYD5Q6GMV2 418 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 WDR63Q8IWG1 891 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 COL14A1Q05707 1796 aaKnown RBP6.76□□□□□ -1.33
PMS1-207ENST00000420421 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
PMS1-207ENST00000420421 APAF1O14727 1248 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
PMS1-207ENST00000420421 TCP11L2Q8N4U5 519 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 DDX17Q92841 729 aaKnown RBP6.75□□□□□ -1.33
PMS1-207ENST00000420421 EYA1Q99502 592 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 KAT6BQ8WYB5 2073 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 IL16Q14005 1332 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 ZNF521Q96K83 1311 aa6.75□□□□□ -1.33
PMS1-207ENST00000420421 LMO7Q8WWI1 1683 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 SOX12O15370 315 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 PRKAR2BP31323 418 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 TMPOP42166 694 aaKnown RBP6.74□□□□□ -1.33
PMS1-207ENST00000420421 GOLGA2Q08379 1002 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 AMOTQ4VCS5 1084 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 SULT6B1Q6IMI4 303 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 GAS2L2Q8NHY3 880 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 ARID3AQ99856 593 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 ERBB3P21860 1342 aa6.74□□□□□ -1.33
PMS1-207ENST00000420421 JCADQ9P266 1359 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 E9PSI1 815 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 MNX1P50219 401 aaPredicted RBP6.73□□□□□ -1.33
PMS1-207ENST00000420421 ZC3H6P61129 1189 aaKnown RBP6.73□□□□□ -1.33
PMS1-207ENST00000420421 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 WWC1Q8IX03 1113 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 CCDC146Q8IYE0 955 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 ANKRD24Q8TF21 1146 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 GPBP1L1Q9HC44 474 aaPredicted RBP6.73□□□□□ -1.33
PMS1-207ENST00000420421 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 CREBZFQ9NS37 354 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.73□□□□□ -1.331e-8■■□□□ 14
PMS1-207ENST00000420421 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
PMS1-207ENST00000420421 PARP4Q9UKK3 1724 aaKnown RBP6.73□□□□□ -1.33
PMS1-207ENST00000420421 KIAA0232Q92628 1395 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 HMOX1P09601 288 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 CT47B1P0C2W7 299 aaPredicted RBP6.72□□□□□ -1.33
PMS1-207ENST00000420421 RIPK4P57078 832 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 PLEKHO1Q53GL0 409 aaPredicted RBP6.72□□□□□ -1.33
PMS1-207ENST00000420421 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 TRMT2AQ8IZ69 625 aaKnown RBP6.72□□□□□ -1.33
PMS1-207ENST00000420421 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 WDR17Q8IZU2 1322 aa6.72□□□□□ -1.33
PMS1-207ENST00000420421 PKD1L3Q7Z443 1732 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 ZNF467Q7Z7K2 595 aaPredicted RBP6.71□□□□□ -1.34
PMS1-207ENST00000420421 SPDYE1Q8NFV5 336 aaPredicted RBP6.71□□□□□ -1.34
PMS1-207ENST00000420421 CABLES1Q8TDN4 633 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 AK7Q96M32 723 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 NBPF4Q96M43 638 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 MYH16Q9H6N6 1097 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 BABAM1Q9NWV8 329 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 AXIN2Q9Y2T1 843 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 SCN11AQ9UI33 1791 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 PLCH1Q4KWH8 1693 aa6.71□□□□□ -1.34
PMS1-207ENST00000420421 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 TATP17735 454 aaPredicted RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 EVA1CP58658 441 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 GNAI1P63096 354 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 RAPGEF4Q8WZA2 1011 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms