RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 PRKRIP1Q9H875 184 aaPredicted RBP27.76■■■□□ 2.03
HMGXB4-203ENST00000420166 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
HMGXB4-203ENST00000420166 KDRP35968 1356 aa27.74■■■□□ 2.03
HMGXB4-203ENST00000420166 MYBBP1AQ9BQG0 1328 aaKnown RBP27.74■■■□□ 2.03
HMGXB4-203ENST00000420166 AEBP1Q8IUX7 1158 aa27.74■■■□□ 2.03
HMGXB4-203ENST00000420166 SBF2Q86WG5 1849 aa27.74■■■□□ 2.03
HMGXB4-203ENST00000420166 PLEKHG2Q9H7P9 1386 aa27.73■■■□□ 2.03
HMGXB4-203ENST00000420166 SULT6B1Q6IMI4 303 aa27.73■■■□□ 2.03
HMGXB4-203ENST00000420166 BCL9O00512 1426 aa27.73■■■□□ 2.03
HMGXB4-203ENST00000420166 DDX54Q8TDD1 881 aaKnown RBP27.7■■■□□ 2.02
HMGXB4-203ENST00000420166 U2SURPO15042 1029 aaKnown RBP27.69■■■□□ 2.02
HMGXB4-203ENST00000420166 PCDH11XQ9BZA7 1347 aa27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 PCDH11YQ9BZA8 1340 aa27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 KAT6BQ8WYB5 2073 aa27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 TNS1Q9HBL0 1735 aaKnown RBP27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 CCDC125Q86Z20 511 aa27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.68■■■□□ 2.021e-6■■■□□ 18.2
HMGXB4-203ENST00000420166 NUDCQ9Y266 331 aa27.68■■■□□ 2.02
HMGXB4-203ENST00000420166 HMOX1P09601 288 aa27.67■■■□□ 2.02
HMGXB4-203ENST00000420166 SPG7Q9UQ90 795 aa27.67■■■□□ 2.02
HMGXB4-203ENST00000420166 TRIM37O94972 964 aa27.65■■■□□ 2.02
HMGXB4-203ENST00000420166 CYP27B1O15528 508 aa27.64■■■□□ 2.02
HMGXB4-203ENST00000420166 NHSQ6T4R5 1651 aa27.63■■■□□ 2.01
HMGXB4-203ENST00000420166 DOT1LQ8TEK3 1739 aa27.62■■■□□ 2.01
HMGXB4-203ENST00000420166 PLEKHO1Q53GL0 409 aaPredicted RBP27.62■■■□□ 2.01
HMGXB4-203ENST00000420166 ANP32CO43423 234 aa27.61■■■□□ 2.01
HMGXB4-203ENST00000420166 U2AF1L5P0DN76 240 aaPredicted RBP27.61■■■□□ 2.01
HMGXB4-203ENST00000420166 U2AF1Q01081 240 aaKnown RBP eCLIP27.61■■■□□ 2.01
HMGXB4-203ENST00000420166 SF3B2Q13435 895 aaKnown RBP27.61■■■□□ 2.01
HMGXB4-203ENST00000420166 AMOTQ4VCS5 1084 aa27.61■■■□□ 2.01
HMGXB4-203ENST00000420166 PHKG2P15735 406 aa27.57■■■□□ 2
HMGXB4-203ENST00000420166 ZNF530Q6P9A1 599 aaPredicted RBP27.57■■■□□ 2
HMGXB4-203ENST00000420166 IFNL2Q8IZJ0 200 aa27.57■■■□□ 2
HMGXB4-203ENST00000420166 ACSBG1Q96GR2 724 aa27.57■■■□□ 2
HMGXB4-203ENST00000420166 BCL11BQ9C0K0 894 aaPredicted RBP27.57■■■□□ 2
HMGXB4-203ENST00000420166 RSPH6AQ9H0K4 717 aa27.57■■■□□ 2
HMGXB4-203ENST00000420166 TOGARAM1Q9Y4F4 1720 aa27.56■■■□□ 2
HMGXB4-203ENST00000420166 NKX1-1Q15270 411 aaPredicted RBP27.56■■■□□ 2
HMGXB4-203ENST00000420166 PTF1AQ7RTS3 328 aa27.56■■■□□ 2
HMGXB4-203ENST00000420166 KCNQ2O43526 872 aa27.55■■■□□ 2
HMGXB4-203ENST00000420166 BTAF1O14981 1849 aa27.54■■■□□ 2
HMGXB4-203ENST00000420166 FCHSD2O94868 740 aa27.54■■■□□ 2
HMGXB4-203ENST00000420166 PRKAR2BP31323 418 aa27.54■■■□□ 2
HMGXB4-203ENST00000420166 BAG6P46379 1132 aa27.54■■■□□ 2
HMGXB4-203ENST00000420166 APBA3O96018 575 aa27.53■■■□□ 2
HMGXB4-203ENST00000420166 DEFB132Q7Z7B7 95 aa27.53■■■□□ 2
HMGXB4-203ENST00000420166 ITGB4P16144 1822 aa27.52■■■□□ 2
HMGXB4-203ENST00000420166 C1orf141Q5JVX7 400 aa27.51■■□□□ 1.99
HMGXB4-203ENST00000420166 HSP90AB1P08238 724 aaKnown RBP27.5■■□□□ 1.99
HMGXB4-203ENST00000420166 PRIM1P49642 420 aaKnown RBP27.5■■□□□ 1.99
HMGXB4-203ENST00000420166 MTHFSDQ2M296 383 aaKnown RBP27.5■■□□□ 1.99
HMGXB4-203ENST00000420166 RGPD3A6NKT7 1758 aaPredicted RBP27.5■■□□□ 1.99
HMGXB4-203ENST00000420166 RGPD4Q7Z3J3 1758 aa27.5■■□□□ 1.99
HMGXB4-203ENST00000420166 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
HMGXB4-203ENST00000420166 AKAP4Q5JQC9 854 aa27.48■■□□□ 1.99
HMGXB4-203ENST00000420166 SYTL4Q96C24 671 aaPredicted RBP27.48■■□□□ 1.99
HMGXB4-203ENST00000420166 PHACTR3Q96KR7 559 aa27.48■■□□□ 1.99
HMGXB4-203ENST00000420166 SCN11AQ9UI33 1791 aa27.48■■□□□ 1.99
HMGXB4-203ENST00000420166 EN1Q05925 392 aaPredicted RBP27.47■■□□□ 1.99
HMGXB4-203ENST00000420166 DCAF5Q96JK2 942 aa27.47■■□□□ 1.99
HMGXB4-203ENST00000420166 KDM6AO15550 1401 aaPredicted RBP27.47■■□□□ 1.99
HMGXB4-203ENST00000420166 GAS2L2Q8NHY3 880 aa27.46■■□□□ 1.99
HMGXB4-203ENST00000420166 WDR43Q15061 677 aaKnown RBP eCLIP27.45■■□□□ 1.98
HMGXB4-203ENST00000420166 CCDC184Q52MB2 194 aa27.45■■□□□ 1.98
HMGXB4-203ENST00000420166 PLSCR1O15162 318 aa27.44■■□□□ 1.98
HMGXB4-203ENST00000420166 CAMKK2Q96RR4 588 aa27.44■■□□□ 1.98
HMGXB4-203ENST00000420166 RREB1Q92766 1687 aa27.43■■□□□ 1.98
HMGXB4-203ENST00000420166 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
HMGXB4-203ENST00000420166 PLEKHF1Q96S99 279 aa27.43■■□□□ 1.98
HMGXB4-203ENST00000420166 PNNQ9H307 717 aaKnown RBP27.43■■□□□ 1.98
HMGXB4-203ENST00000420166 EZH2Q15910 746 aaKnown RBP27.42■■□□□ 1.98
HMGXB4-203ENST00000420166 MPRIPQ6WCQ1 1025 aa27.42■■□□□ 1.98
HMGXB4-203ENST00000420166 MAP3K5Q99683 1374 aa27.42■■□□□ 1.98
HMGXB4-203ENST00000420166 NEFMP07197 916 aa27.41■■□□□ 1.98
HMGXB4-203ENST00000420166 ERVV-2B6SEH9 535 aa27.4■■□□□ 1.98
HMGXB4-203ENST00000420166 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
HMGXB4-203ENST00000420166 TMOD3Q9NYL9 352 aa27.39■■□□□ 1.98
HMGXB4-203ENST00000420166 ADAMTS8Q9UP79 889 aa27.39■■□□□ 1.98
HMGXB4-203ENST00000420166 DLG5Q8TDM6 1919 aa27.38■■□□□ 1.97
HMGXB4-203ENST00000420166 PIGBQ92521 554 aa27.38■■□□□ 1.97
HMGXB4-203ENST00000420166 NUP188Q5SRE5 1749 aa27.38■■□□□ 1.97
HMGXB4-203ENST00000420166 MAPK8IP3Q9UPT6 1336 aa27.38■■□□□ 1.97
HMGXB4-203ENST00000420166 GNAT3A8MTJ3 354 aa27.37■■□□□ 1.97
HMGXB4-203ENST00000420166 RNMTO43148 476 aaKnown RBP27.37■■□□□ 1.97
HMGXB4-203ENST00000420166 LY75O60449 1722 aa27.37■■□□□ 1.97
HMGXB4-203ENST00000420166 LGR6Q9HBX8 967 aa27.37■■□□□ 1.97
HMGXB4-203ENST00000420166 MRC1P22897 1456 aa27.37■■□□□ 1.97
HMGXB4-203ENST00000420166 CABP4P57796 275 aa27.35■■□□□ 1.97
HMGXB4-203ENST00000420166 TXNRD1Q16881 649 aa27.33■■□□□ 1.97
HMGXB4-203ENST00000420166 DIEXFQ68CQ4 756 aaKnown RBP27.33■■□□□ 1.97
HMGXB4-203ENST00000420166 CCDC146Q8IYE0 955 aa27.33■■□□□ 1.97
HMGXB4-203ENST00000420166 PROM2Q8N271 834 aa27.33■■□□□ 1.97
HMGXB4-203ENST00000420166 NFE2L2Q16236 605 aa27.32■■□□□ 1.96
HMGXB4-203ENST00000420166 IL17REQ8NFR9 667 aa27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 SMARCC1Q92922 1105 aaPredicted RBP27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 RUNDC1Q96C34 613 aa27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 SLC52A2Q9HAB3 445 aa27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 PALLDQ8WX93 1383 aa27.31■■□□□ 1.96
HMGXB4-203ENST00000420166 NFATC2IPQ8NCF5 419 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms