RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.05
SSBP3-206ENST00000420121 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
SSBP3-206ENST00000420121 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
SSBP3-206ENST00000420121 FLT4P35916 1363 aa15.35■□□□□ 0.05
SSBP3-206ENST00000420121 TXNRD1Q16881 649 aa15.34■□□□□ 0.05
SSBP3-206ENST00000420121 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
SSBP3-206ENST00000420121 LY75O60449 1722 aa15.34■□□□□ 0.05
SSBP3-206ENST00000420121 PKD1L3Q7Z443 1732 aa15.34■□□□□ 0.05
SSBP3-206ENST00000420121 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
SSBP3-206ENST00000420121 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
SSBP3-206ENST00000420121 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
SSBP3-206ENST00000420121 NSD2O96028 1365 aa15.32■□□□□ 0.04
SSBP3-206ENST00000420121 DDX54Q8TDD1 881 aaKnown RBP15.31■□□□□ 0.04
SSBP3-206ENST00000420121 PDGFDQ9GZP0 370 aaPredicted RBP15.31■□□□□ 0.04
SSBP3-206ENST00000420121 SMG6Q86US8 1419 aaKnown RBP15.31■□□□□ 0.04
SSBP3-206ENST00000420121 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
SSBP3-206ENST00000420121 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
SSBP3-206ENST00000420121 CGNL1Q0VF96 1302 aa15.3■□□□□ 0.04
SSBP3-206ENST00000420121 QSER1Q2KHR3 1735 aa15.29■□□□□ 0.04
SSBP3-206ENST00000420121 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
SSBP3-206ENST00000420121 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
SSBP3-206ENST00000420121 ITGB4P16144 1822 aa15.29■□□□□ 0.04
SSBP3-206ENST00000420121 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
SSBP3-206ENST00000420121 LRRC4BQ9NT99 713 aa15.28■□□□□ 0.04
SSBP3-206ENST00000420121 SLC15A2Q16348 729 aa15.27■□□□□ 0.04
SSBP3-206ENST00000420121 PANK3Q9H999 370 aa15.27■□□□□ 0.04
SSBP3-206ENST00000420121 POLKQ9UBT6 870 aa15.27■□□□□ 0.04
SSBP3-206ENST00000420121 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
SSBP3-206ENST00000420121 RAPGEF4Q8WZA2 1011 aa15.25■□□□□ 0.03
SSBP3-206ENST00000420121 SPON1Q9HCB6 807 aa15.25■□□□□ 0.03
SSBP3-206ENST00000420121 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
SSBP3-206ENST00000420121 TATP17735 454 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-206ENST00000420121 ZNF827Q17R98 1081 aa15.24■□□□□ 0.03
SSBP3-206ENST00000420121 STK32BQ9NY57 414 aa15.24■□□□□ 0.03
SSBP3-206ENST00000420121 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
SSBP3-206ENST00000420121 PPM1GO15355 546 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-206ENST00000420121 CYP27B1O15528 508 aa15.23■□□□□ 0.03
SSBP3-206ENST00000420121 EYA1Q99502 592 aa15.23■□□□□ 0.03
SSBP3-206ENST00000420121 PTGER2P43116 358 aa15.22■□□□□ 0.03
SSBP3-206ENST00000420121 KIF7Q2M1P5 1343 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 ZBTB7AO95365 584 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-206ENST00000420121 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
SSBP3-206ENST00000420121 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 SYTL4Q96C24 671 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-206ENST00000420121 C5P01031 1676 aa15.21■□□□□ 0.03
SSBP3-206ENST00000420121 KCNQ4P56696 695 aa15.2■□□□□ 0.02
SSBP3-206ENST00000420121 SLC27A3Q5K4L6 730 aa15.2■□□□□ 0.02
SSBP3-206ENST00000420121 SGIP1Q9BQI5 828 aa15.2■□□□□ 0.02
SSBP3-206ENST00000420121 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
SSBP3-206ENST00000420121 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-206ENST00000420121 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-206ENST00000420121 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-206ENST00000420121 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
SSBP3-206ENST00000420121 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-206ENST00000420121 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
SSBP3-206ENST00000420121 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
SSBP3-206ENST00000420121 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
SSBP3-206ENST00000420121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
SSBP3-206ENST00000420121 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-206ENST00000420121 PPP1R1BQ9UD71 204 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-206ENST00000420121 MORC1Q86VD1 984 aa15.14■□□□□ 0.01
SSBP3-206ENST00000420121 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-206ENST00000420121 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
SSBP3-206ENST00000420121 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
SSBP3-206ENST00000420121 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
SSBP3-206ENST00000420121 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
SSBP3-206ENST00000420121 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
SSBP3-206ENST00000420121 PHKG2P15735 406 aa15.13■□□□□ 0.01
SSBP3-206ENST00000420121 MPRIPQ6WCQ1 1025 aa15.13■□□□□ 0.01
SSBP3-206ENST00000420121 PIGBQ92521 554 aa15.12■□□□□ 0.01
SSBP3-206ENST00000420121 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
SSBP3-206ENST00000420121 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
SSBP3-206ENST00000420121 KDRP35968 1356 aa15.11■□□□□ 0.01
SSBP3-206ENST00000420121 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
SSBP3-206ENST00000420121 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
SSBP3-206ENST00000420121 SLC16A10Q8TF71 515 aa15.1■□□□□ 0.01
SSBP3-206ENST00000420121 FHDC1Q9C0D6 1143 aaPredicted RBP15.1■□□□□ 0.01
SSBP3-206ENST00000420121 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
SSBP3-206ENST00000420121 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-206ENST00000420121 SCN11AQ9UI33 1791 aa15.09■□□□□ 0.01
SSBP3-206ENST00000420121 IL13P35225 146 aa15.09■□□□□ 0.01
SSBP3-206ENST00000420121 TFCP2L1Q9NZI6 479 aa15.09■□□□□ 0.01
SSBP3-206ENST00000420121 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
SSBP3-206ENST00000420121 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
SSBP3-206ENST00000420121 SYT17Q9BSW7 474 aa15.08■□□□□ 0
SSBP3-206ENST00000420121 COL5A3P25940 1745 aaPredicted RBP15.08■□□□□ 0
SSBP3-206ENST00000420121 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
SSBP3-206ENST00000420121 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
SSBP3-206ENST00000420121 ARXQ96QS3 562 aa15.07■□□□□ 0
SSBP3-206ENST00000420121 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
SSBP3-206ENST00000420121 COL3A1P02461 1466 aaPredicted RBP15.07■□□□□ 0
SSBP3-206ENST00000420121 UTRNP46939 3433 aa15.06■□□□□ 0
SSBP3-206ENST00000420121 RNF216Q9NWF9 866 aaPredicted RBP15.06■□□□□ 0
SSBP3-206ENST00000420121 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
SSBP3-206ENST00000420121 ASAP1Q9ULH1 1129 aa15.06■□□□□ 0
SSBP3-206ENST00000420121 MTHFSP49914 203 aa15.05■□□□□ -0
SSBP3-206ENST00000420121 ATG3Q9NT62 314 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms